Tag: covid-19

Genome assemblies and aligned annotations for a wide range of vertebrates and model organisms, along with an integrated tool set for visualizing, comparing, analyzing and sharing both publicly available and user-generated genomic datasets.

Medical Subject Headings is the National Library of Medicine - controlled vocabulary used for indexing articles for PubMed and other NLM databases.

The Gene Expression Omnibus (GEO) is a public repository that archives and freely distributes microarray, next-generation sequencing, and other forms of high-throughput functional genomic data submitted by the scientific community. In addition to dat ...

This resource is powered by the Protein Data Bank archive-information about the 3D shapes of proteins, nucleic acids, and complex assemblies that helps students and researchers understand all aspects of biomedicine and agriculture, from protein synth ...

REACTOME is an open-source, open access, manually curated and peer-reviewed pathway database.

GenBank is the NIH genetic sequence database, an annotated collection of all publicly available DNA sequences. The complete release notes for the current version of GenBank are available on the NCBI ftp site. A new release is made every two months. G ...

IntAct provides a database system and analysis tools for molecular interaction data. All interactions are derived from literature curation or direct user submissions. IntAct (with MINT) is a Core Data Resource of ELIXIR. IntAct contains data from all ...

The information in the database is presented at two levels: the initial view or landing pages for each target family provide expert-curated overviews of the key properties and selective ligands and tool compounds available. For selected targets more ...

The SWISS-MODEL Repository is a database of annotated 3D protein structure models generated by the SWISS-MODEL homology-modelling pipeline for protein sequences of selected model organisms.

MGI is the international database resource for the laboratory mouse, providing integrated genetic, genomic, and biological data to facilitate the study of human health and disease.

Database that aims to advance understanding about how environmental exposures affect human health. It provides manually curated information about chemical–gene/protein interactions, chemical–disease and gene–disease relationships. These data are inte ...

ClinicalTrials.gov, a largest source of clinical trials data in the US, is a Web-based resource that provides patients, their family members, health care professionals, researchers, and the public with easy access to information on publicly and priva ...

WikiPathways is an open, collaborative platform dedicated to the curation of biological pathways. WikiPathways was established to facilitate the contribution and maintenance of pathway information by the biology community.

DisGeNET is a discovery platform containing one of the largest collections available of genes and variants involved in human diseases. DisGeNET integrates data from expert curated repositories, GWAS catalogues, animal models, and the scientific liter ...

The Influenza Research Database (IRD) is a free, open, publicly-accessible resource funded by the U.S. National Institute of Allergy and Infectious Diseases through the Bioinformatics Resource Centers program. IRD provides a comprehensive, integrated ...

The IEDB provides the scientific community with a central repository of freely accessible epitope data and epitope prediction and analysis resources. The IEDB is a publicly accessible, comprehensive immune epitope database containing peptidic linear ...

Cryo-electron microscopy reconstruction methods are uniquely able to reveal structures of many important macromolecules and macromolecular complexes. The Electron Microscopy Data Bank (EMDB) is a public repository for electron microscopy density maps ...

The Virus Pathogen Database and Analysis Resource (ViPR) is an integrated repository of data and analysis tools for multiple virus families, supported by the National Institute of Allergy and Infectious Diseases (NIAID) Bioinformatics Resource Center ...

ViralZone is a web resource for viral genes and families, providing detailed molecular and epidemiological information, along with virion and genome figures. Each virus or family page gives easy access to UniProtKB/Swiss-Prot viral protein entries.

MassIVE is a community resource developed by the NIH-funded Center for Computational Mass Spectrometry to promote the global, free exchange of mass spectrometry data. MassIVE datasets can be assigned ProteomeXchange accessions to satisfy publication ...

ProteomicsDB is a protein-centric in-memory database for the exploration of large collections of quantitative mass spectrometry-based proteomics data. ProteomicsDB was first released in 2014 to enable the interactive exploration of the first draft of ...

VirHostNet 2.0 integrates an extensive and original literature-curated dataset of virus/virus and virus/host protein-protein interactions complemented with publicly available data.

VIPERdb is a database for icosahedral virus capsid structures. The emphasis is on providing data from structural and computational analyses on these systems, as well as high quality renderings for visual exploration.

NDEx is an online commons where scientists can upload, share, and publicly distribute biological networks and pathway models. The NDEx Project maintains a web-accessible public server, a documentation website, provides seamless connectivity to Cytosc ...

The Protein Data Bank is the single worldwide archive of structural data of biological macromolecules.

The Cellosaurus is a knowledge resource on cell lines. It attempts to describe all cell lines used in biomedical research. Its scope includes: Immortalized cell lines; naturally immortal cell lines (example: stem cell lines); finite life cell lines w ...

The euHCVdb is mainly oriented towards protein sequence, structure and function analyses and structural biology of Hepatitis C Virus.

VirusMentha is a collection of viral interactions manually curated from protein-protein databases that adhere to the IMEx consortium. This resource offers a series of tools to analyse selected proteins in the context of a network of interactions. vir ...

Database for open data sharing of resting-state fMRI and DTI images collected from over 50 sites around the world. These data collections now contain comprehensive phentoypic information, openly available via data usage agreements.

The Complex Portal is a manually curated, encyclopaedic resource of macromolecular complexes from a number of key model organisms. The majority of complexes are made up of proteins but may also include nucleic acids or small molecules. All data is fr ...

The BBMRI-ERIC Directory is a tool to share aggregate information about biobanks across Europe. The Directory welcomes new biobanks to join and publish information about themselves, including their contact information in the directory. The BBMRI-ERIC ...

The COVID-19 Data Portal enables researchers to upload, access and analyse COVID-19 related reference data and specialist datasets. The aim of the COVID-19 Data Portal is to facilitate data sharing and analysis, and to accelerate coronavirus research ...

UK Biobank is a large-scale biomedical database and research resource that provides researchers access to detailed longitudinal phenotype, medical and genetic data from 500,000 volunteer participants.

COVDB contains cell culture, animal model, and clinical data on compounds with a proven or potential anti-coronavirus activity.

Chinese Clinical Trial Registry provides the services include register for trials, consultation for trial design, central randomization for an allocation sequence, peer review for draft articles and training for peer reviewers.

ATCC authenticates microorganisms and cell lines and manages logistics of long-term preservation and distribution of cultures for the scientific community. ATCC supports the cultures it acquires and authenticates with expert technical support, intell ...

The Liverpool Drug Interaction Group (based at the University of Liverpool, UK), in collaboration with the University Hospital of Basel (Switzerland) and Radboud UMC (Netherlands), have produced various materials in PDF format to aid the use of exper ...

The COVID-19 Research Collaborations database stores information on researchers and institutions for the purposes of identifying potential research experts or collaborators in areas related to the coronavirus epidemic across basic science, translatio ...

The John Hopkins Coronavirus Resource Center was first shared publicly on January 22nd 2020 to provide researchers, public health authorities, and the general public with a user-friendly tool to track the outbreak as it unfolds.

Surveillance Epidemiology of Coronavirus Under Research Exclusion (SECURE-IBD) is an international, pediatric and adult database to monitor and report on outcomes of COVID-19 occurring in IBD patients. The goals of the registry is to rapidly define t ...

The Infectious Diseases Data Observatory (IDDO) assembles clinical, laboratory and epidemiological data on a collaborative platform to be shared with the research and humanitarian communities. The data are analysed to generate reliable evidence and i ...

Novartis launched the results website in 2005 becoming one of the first companies to publically post results from Phase 2b-4 interventional trials. The Novartis position evolved over time to include public disclosure of results from Phase 1- 2a inter ...

The EU Clinical Trials Register contains information on interventional clinical trials on medicines conducted in the European Union (EU), or the European Economic Area (EEA) which started after 1 May 2004.

The ISRCTN registry is a primary clinical trial registry recognised by WHO and ICMJE that accepts all clinical research studies (whether proposed, ongoing or completed), providing content validation and curation and the unique identification number n ...

ECDC's main role as an agency of the European Union is to strengthen Europe’s defences against communicable diseases, worked together with all EU/EEA countries in response to public health threats and emerging diseases. Part of the ECDC mission is to ...

The Australian New Zealand Clinical Trials Registry (ANZCTR) is an online register of clinical trials being undertaken in Australia, New Zealand and elsewhere. The ANZCTR includes trials from the full spectrum of therapeutic areas of pharmaceuticals, ...

The NTR is a publicly accessible and freely searchable prospective trial register in which studies are registered that run in the Netherlands or are carried out by Dutch researchers. Primary Registries have been recognized and accepted by the WHO and ...

UMIN-CTR is a Clinical Trials Registry hosted by the japanese University Hospital Medical Information Network (UMIN). UMIN-CTR has been recognized by the ICMJE as an "acceptable registry". At a minimum, a paper should be received for consideration by ...

TwinsUK follows the lives of adult twins to understand how genetic variation relates to health and ageing. Over 30 years, collected data comprises self-reported, physical and cognitive measures, biochemical measures, 'omics and a wealth of biosamples ...

Covid 19 Test Results

Details of completed (processed) COVID-19 vaccinations

Samples of wastewater are collected 7 days a week from sewage treatment plants across England. Samples are analysed to determine the number of gene copies of SARS-CoV-2 per litre using quantitative Polymerase Chain Reaction (PCR).

The purpose of this dataset is to understand the prevalence of COVID-19 in the UK population, including swab results, antibody tests and demographic information.

Data relating to coronavirus (COVID-19) vaccination status.

Test results for COVID-19 tests.

COVID-19 Consolidated Deaths dataset. Similar to the usual Annual deaths extract (SAIL Databank), except this dataset contains additional information with relevance to deaths where Covid-19 is attributable.

List of high-risk people advised to self-isolate during Covid pandemic.

Data forming the COVID-19 SARI-Watch data set (formerly CHESS) relate to demographic, risk factor, treatment, & outcome information for patients admitted to hospital with a confirmed COVID-19 diagnosis, as recorded in the COVID-19 SARI-Watch surveill ...

Data relating to any adverse reactions which occur within the first fifteen minutes after administration of the coronavirus (COVID-19) vaccination.

This dataset details the Covid-19 Test Trace and Protect programme implemented across various parts of the UK.

The COVID Symptom Tracker was designed by doctors and scientists at King's College London (KCL), Guys and St Thomas’ Hospital working in partnership with ZOE Global. Led by Dr Tim Spector, professor of genetic epidemiology at KCL and director of Twin ...

Data forming the Covid-19 Second Generation Surveillance Systems data set relate to demographic and diagnostic information from Pillar 1 swab testing in PHE labs and NHS hospitals and Pillar 2 Swab testing in the community.

COVID-19 UK Non-hospital Antigen Testing Results (Pillar 2) data is required by NHS Digital to support COVID-19 requests for linkage, analysis and dissemination.

The Covid-19 UK Non-hospital Antibody Testing Results (Pillar 3) dataset, also referred to as iElisa, documents individuals that have undergone a finger prick test for antibodies from having had Covid-19.

The purpose of this dataset is to understand the prevalence of COVID-19 in the UK population, including swab results, antibody tests and demographic information.

We aim to establish a reliable diagnostic tool based on a deep-learning framework for the screening of patients who present with COVID-19 related abnormalities on chest x-rays.

The cohort contains repeated serological antibody testing of at least 1000 healthcare workers at Great Ormond Street Hospital. Within this cohort, a subset of 150-250 staff members with confirmed (PCR positive) SARS-CoV-2 disease will be followed wit ...

A consented IBD dataset of 9,800 participants, with a further 30,000 ethically-permissioned records for research related to COVID-19 and IBD. Includes patient demographics, medications plus vaccinations, responses and care received April 2020-June 20 ...

This dataset contains COVID-19 Vaccination events in Scotland since December 2020. This includes information such as eligibility cohort, date of vaccination, and vaccination product.

Patient-level data for adults and children with CKD or adults with an AKI on dialysis who are under the care of NHS hospital renal centres in England, Northern Ireland and Wales and who have a positive laboratory test for SARS-CoV-2.

The National COVID-19 Chest Imaging Database is a joint collaboration between NHSX, BSTI and Royal Surrey NHS Foundation Trust to create a centralised UK database of X-Ray, CT and MRI images from hospital patients to inform the COVID-19 response. The ...

A cohort of students and staff who have consented for research from the Universities of Nottingham, Cambridge and Cardiff.

The dataset is extracted from local EHR System containing demographics, administrative hospital encounter information, previous medical history (diagnoses and procedures), current symptoms and disease complications, clinical events. The COVID-19 pand ...

ISARIC4C (Coronavirus Clinical Characterisation Consortium) has collected the following data and samples from: 270,230 patients at Tier Zero case report forms (CO-CIN) - data only 2,510 patients at Tier 1/2 (host/viral multiomics) - samples

This project aims to develop ELISA based detection kits for the detection of viral antigen of COVID-19, and separately to detect the immune response to COVID-19 infection. To be marketed in Pakistan.

This synthetic dataset is based on anonymised real primary care patient data extracted from the CPRD Aurum database. The dataset focuses on patients presenting to primary care with symptoms indicative of COVID-19.

Pragmatic web-based Bayesian adaptive randomised controlled trial using hypertonic saline. This data was collected in a study that tries to find out if nasal washing and gargling with salt-water helps individuals get better faster.

Deeply phenotyped population-level surveillance of therapeutic or preventative antimicrobial interventions of hospitalised COVID-19 patients; including comorbidity data; physiology, blood biomarkers, and outcomes. Longitudinal and individually linked ...

Population-level surveillance and rapid assessment of the effectiveness of therapeutic or preventive interventions are required to ensure that interventions are targeted to those at highest risk of serious illness or death from COVID-19. Introduction ...

CRP has been identified as a biomarker of importance in COVID. This OMOP dataset features highly granular health data from over 4500 patients with hospitalised COVID-19, including oxygen support and treatments given.

This project will explore the perceptions and feelings of Frontline Health Care Workers (including doctors, nurses and community health workers) in Cox’s Bazar, about personal preparation and protective measures for FHCWs during the COVID-19 pandemi ...

Longitudinal data to investigate interactions of frailty, age and illness severity on outcomes in adults admitted during the COVID-19 pandemic. Clinicians’ frailty scoring versus electronic frailty scoring. Highly granular structured serial data.

One of the key approaches to containing COVID-19 has been self-quarantine and social distancing, which poses multiple challenges especially in a Pakistani community which follows strong cultural and social beliefs.

The NWL COVID19 PLD SITREP linked table is a direct daily feed from NWL providers. The table provides the patient level data related to COVID admissions in hospital since the outbreak of the pandemic, includes bed status/ventilation status etc. The D ...

Patients hospitalised with community acquired pneumonia (CAP) before and during COVID-19 pandemic. Granular care pathways. Multi-morbidity, investigations, interventions and treatments. Serial physiology, blood biomarkers, outcome data. Deeply phenot ...

We aim to explore the impact of the COVID-19 pandemic on psychological stress and well-being of primary healthcare workers (HCWs) in Malaysia.

Follow-COVID is a study of over 100 patients across multiple regions within Scotland over the course of 6 years. The study seeks to identify the long term consequences and future care needs of COVID-19 survivors.

This dataset covers all patients and vaccinations administered or planned for Covid-19, in or funded by the NHS.

CPRD GOLD linked COVID-19 Hospitalisation in England Surveillance System (CHESS) incudes epidemiological data on COVID-19 infection in persons requiring hospitalisation and ICU/HDU admission.

CPRD Aurum linked COVID-19 Hospitalisation in England Surveillance System (CHESS) incudes epidemiological data on COVID-19 infection in persons requiring hospitalisation and ICU/HDU admission.

CPRD GOLD linked Intensive Care National Audit & Research Centre (ICNARC) COVID-19 dataset covers adult patients in general critical care units who had a laboratory confirmed COVID-19 case in England since 12th December 2019.

CPRD Aurum linked Intensive Care National Audit & Research Centre (ICNARC) COVID-19 dataset covers adult patients in general critical care units who had a laboratory confirmed COVID-19 case in England since 12th December 2019.

Details of completed (processed) COVID-19 antigen tests booked through the NHS-Digital portals.

Details of completed (processed) COVID-19 antigen tests carried out in NHS hospitals in Northern Ireland.

Contains data on episode level new and unscheduled attendances at Emergency Departments and some smaller community hospitals and minor injury units (MIUs).

Lighthouse laboratories [high-throughput facilities dedicated to COVID-19]

2000 health care workers in NHS Tayside and from social care will have blood samples tested to detect antibodies to SARS-CoV-2, to identify undiagnosed asymptomatic healthcare worker infections with COVID-19.

A community cohort study of Covid-19 that contains baseline demographics and clinical information, and includes weekly/monthly follow up data.

Hospital COVID patients 6.01.2020-20.08.2020). Granular severity, ethnicity, co-morbidity. Serial acuity, physiology, blood biomarkers, treatments, ITU, outcome. Deeply phenotyped, longitudinal. OMOP dataset: Hospital COVID patients: severity, acuit ...

Hospital COVID patients (6th Jan 2020 onwards). Granular severity, ethnicity, co-morbidity. Serial physiology, blood biomarkers, images, treatments, ITU, outcome, pre/post admission healthcare use. Deeply phenotyped, longitudinal. Waves 1/ 2 PIONEER ...

20+ Longitudinal Population Studies datasets linked to COVID-19 health datasets held in a TRE hosted by the University of Swansea’s UK Secure Research Platform, accessible to approved UK-based researchers for COVID-19 related research for the public ...

Linkable health datasets in respective TREs in England, Scotland and Wales, accessible to approved researchers who are members of the BHF Data Science Centre's CVD-COVID-UK consortium, and for COVID-IMPACT / National Core Studies projects (England on ...

A subset of 2011 Census variables (and variable breakdowns) in the COVID-19 Research Database

Contains the results of all PCR / Antigen Tests / LFTs reported to Public Health Scotland by NHS Scotland and UK Government Regional Testing Laboratories including Drive Through Centres and Mobile Units, and home testing kits

UCL researchers have set up a national research study called “Vivaldi” with Four Seasons healthcare and the Department of Health and Social Care. The aim is to find out how many care home staff and residents have have have been infected with COVID-19 ...

Large-scale study testing blood samples and swabs obtained from healthcare workers who work in a clinical setting to see if infection with COVID-19 protects them from future episodes of infection.

SARS-CoV-2 virus stimulates a rapid antibody response in people with symptomatic and asymptomatic infection. Seroprevalence of SARS-CoV-2 antibodies in a population can serve as a useful measure of exposure and spread. Severe acute respiratory syndro ...

The COVIDsortium study aims to identify host and pathogen correlates of protection and pathogenesis in SARS-CoV-2 infection. The prospective observational cohort study (n=1000) healthcare workers (HCWs) with serial data/sample collection pre & post C ...

This survey contains new indicators from the Opinions and Lifestyle Survey to understand the impacts of the coronavirus (COVID-19) pandemic on people, households and communities in Great Britain.

COVID-19 COG-UK Viral Genome (variant strain data)

The NWL Pathology linked table is a direct feed from The Doctors Laboratory and North West London Pathology for patients registered within NWL. Some of the data items included are test dates and times, test codes and names and test results. Pathology ...

NHS Digital’s Trusted Research Environment service for England provides approved researchers with access to essential linked, de-identified health data to answer COVID-19 related questions. TRE service provides researchers support on data access requ ...

A deeply phenotyped dataset of hospitalised COVID-19 patients in Birmingham; including granular ethnicity and multi-morbidity data confirmed in primary care; physiology, blood biomarkers, treatments, interventions, ITU admissions and outcomes. PIONEE ...

Near-real time aggregated cancer activity data from 8 major sites across the UK, for the purpose of testing the effect of the COVID-19 pandemic on cancer diagnostic and cancer treatment pathways. This data set has been designed to support the aim to ...

The test for people without coronavirus symptoms is called a rapid lateral flow test. Rapid lateral flow tests help to find cases in people who may have no symptoms but are still infectious and can give the virus to others.

CovPall is a multicenter multinational observational study of palliative care during the COVID-19 pandemic. This dataset includes the online survey of palliative care services, the first main component of CovPall.

The PANTHER study aims to deepen the understanding of susceptibility to, immunity from and transmission of Sars-Cov2 (the virus that causes Covid-19) in an at risk population. The PANTHER (PANdemic Tracking of Healthcare woRkers) study, is hosted at ...

Community-based sero surveillance study provide an opportunity to answer important questions on the proportion of individuals in the community who have been infected with Covid-19.

This data originates from the Ad Astra system.

Optimising the treatment of Bangladeshi adult patients with severe pneumonia and/or ARDS with hypoxemia using adaptive version of locally made Bubble CPAP: Feasibility study : treating adults (COVID-19 positive or negative) to design a RCT.

REACT-2 is a large-scale national surveillance study in England. It examines the prevalence of antibodies to SARS-CoV-2 in adults the community. Participants complete finger prick self-testing at home (lateral flow immunoassay) and a questionnaire.

Chronic Obstructive Pulmonary Disease (COPD) patients admitted or using hospital services. Granular care pathways. Multi-morbidity, investigations, interventions, treatments. Serial physiology, blood biomarkers, physiotherapy, outcome. Deeply phenoty ...

Adverse reactions occurring shortly after COVID_19 vaccination.

Attendance and clinical information for all Accident and Emergency attendances.

Attendance information for all hospital outpatient appointments.

This is a record of primary care prescriptions that are submitted by community pharmacies in Northern Ireland to the Business Service Organisation for payment.

Final Death registration data, collected as part of civil registration, providing information on deaths that are registered in England and Wales.

Register of all deaths relating to Welsh residents, including those that died out of Wales.

Understanding Society is a largescale longitudinal survey of approximately 40,000 households across the United Kingdom.

All Registrations to the National Records of Scotland of stillbirths.

Information on attendances at emergency care departments in 3 of the 5 Health & Social Care Trusts in Northern Ireland - see Emergency Department (eEMS) for the other 2 Trusts.

Contains a critical care specific fields giving greater granularity for patients under critical care.

Register of all individuals registered with a Welsh GP, includes individuals anonymised address and practice history.

Next Steps is a longitudinal cohort study following the lives of around 16,000 people in England born in 1989-90.

All registrations to the National Records of Scotland of deaths

Information on attendances at emergency care departments in 2 Trusts of the 5 Health & Social Care Trusts in Northern Ireland - see Emergency Department (Symphony) for the other 3 Trusts.

The database contains all inpatient and day case activity undertaken in NHS Wales plus data on Welsh residents treated in English Trusts.

2011 Census data for England and Wales, linked to Mortality Data, Hospital Episode Statistics (HES) data, and GP Extraction Service (GPES) data for Pandemic Planning and Research Data.

There are two types of data submitted to the A&E DataMart: episode and aggregate level data. All hospitals with Emergency Departments submit episode level data containing a detailed record for each patient attendance.

Daily version of Annual District Death Dataset.

CPRD GOLD linked Second Generation Surveillance System (SGSS) data contains SARS-CoV-2 testing (swab samples, PCR test method) offered to those in hospital and NHS key workers (i.e. Pillar 1) and includes positive tests results only.

CPRD Aurum linked Second Generation Surveillance System (SGSS) data contains SARS-CoV-2 testing (swab samples, PCR test method) offered to those in hospital and NHS key workers (i.e. Pillar 1) and includes positive tests results only.

Intensive care case mix and activity.

This dataset provides limited information about which NHS workers completed Risk Assessments in the course of normal work.

This dataset contains a subset of information relating to GP contacts in Scotland and the reason for the contact.

Provisional monthly death registration data, collected as part of civil registration, providing information on deaths that are registered in England and Wales.

Record-level patient data set of patients attending outpatient clinics at NHS hospitals in England. A record represents one appointment.

The Hospital Inpatient System (HIS) dataset is made up of data items relating to admitted patient care delivered by NHS hospitals in Northern Ireland, generated by the patient administration systems within each hospital.

A census in the UK is a count of all people and households. This census in the UK was held on 27 March 2011.

Summary of SARS-CoV-2 lineages and mutations

The Prescribing Information System (PIS) is the definitive data source for all prescribing relating to all medicines and their costs that are prescribed and dispensed in the community in Scotland.

Daily Situation Report dataset. Daily situation report for healthcare equipment, staff, activity, capacity and usage.

The Rapid Preliminary Inpatient Data (RAPID) dataset contains the underlying admissions data which is used by System Watch. It enables access to the hospital admissions data submitted in its unprocessed state e.g. it does not contain predictions.

The Northern Ireland Maternity system (NIMATs) contains a range of demographic and clinical information on mothers and infants.

The Northern Ireland Mortality Dataset contains information on deaths registered in Northern Ireland (NI). The data is collected from death certificates and information provided by GPs and other Health and Social Care Northern Ireland (HSCNI) provide ...

Record of patients registered with a GP practice in Northern Ireland. The data is sourced from the National Health Application and Infrastructure Services (NHAIS) system and includes information relating to a patient’s age, gender, postcode & GP prac ...

Attendance and clinical information for all general practice interactions: includes patients symptoms, investigations, diagnoses, prescribed medication and referrals to tertiary care.

The Outpatients (SMR00) dataset collects episode level data from patients on new and follow up appointments at outpatient clinics in all specialities (except A&E and Genito-Urinary Medicine).

The indicators and analysis presented in this bulletin are based on responses from the new voluntary fortnightly business survey, which captures business’ views on impact on turnover, workforce prices, trade and business resilience

The English Longitudinal Study of Ageing (ELSA) is a nationally representative multi-purpose survey of individuals aged 50 and over.

COG-UK Consortium has published a dataset which contains over 20K SARS-CoV-2 viral genome sequences available as open access.

The primary purpose of the Labour Force Survey (LFS) is "providing good quality point in time and change estimates for various labour market outputs and related topics” (National Statistics Quality Review (NSQR) of Labour Force Survey 2014).

The primary purpose of the Labour Force Survey (LFS) is "providing good quality point in time and change estimates for various labour market outputs and related topics” (National Statistics Quality Review (NSQR) of Labour Force Survey 2014).

The Maternity Indicators Data Set captures data relating to the woman at initial assessment and to mother and baby (or babies) for all births. This relates to initial assessment and birth activity undertaken in Wales only.

The primary purpose of the Labour Force Survey (LFS) is "providing good quality point in time and change estimates for various labour market outputs and related topics” (National Statistics Quality Review (NSQR) of Labour Force Survey 2014).

REal-time Assessment of Community Transmission (REACT-2) started in May 2020 to determine the prevalence of and trends in antibodies levels in study participants. This study involves approximately 150,000 unique people. REal-time Assessment of Commun ...

The Welsh Dispensing Dataset covers prescriptions that are prescribed in Wales by GPs (general medical practitioners) and non medical prescribers that have prescribed on behalf of the GP practice, that are then dispensed in the community within Wales ...

Chronic Obstructive Pulmonary Disease (COPD) patients admitted or using hospital services. Granular care pathways. Multi-morbidity, investigations, interventions, treatments. Serial physiology, blood biomarkers, physiotherapy, outcome. Deeply phenoty ...

HEAF is a prospective cohort study of adults in England aged 50 and over that aims to examine the relationship between extended working life and health, and shed light on how to best to support the well-being of older workers.

The Scottish Stillbirth and Infant Death Survey (SSBIDS) collects additional information on stillbirths, neonatal deaths and late fetal deaths.

Deaths registration data (all deaths in England and Wales) collected from The Registrar General for England and Wales. Record-level person data set, where a record represents one death registration.

DataLoch brings together routine data collected as part of people’s interactions with health care services in South-East Scotland. These data include details of visits to hospitals or GPs, treatments, medicines prescribed, outcomes and test results.

(Superseded by the WASD dataset) This covers data pertaining to more than 250,000 emergency calls a year, over 50,000 urgent calls and transport over 1.3 million non-emergency patients to over 200 treatment centres throughout England and Wales.

The data mart links data from (NHS 24, Scottish Ambulance Service, Out of Hours Primary Care, Emergency Department, Acute, Mental Health and Deaths) to show a Continuous Unscheduled Care Pathway (CUP) for records with a valid CHI number.

The 1970 British Cohort Study (BCS70) is following the lives of around 17,000 people born in England, Scotland and Wales in a single week of 1970.

Record-level patient data set of patients admitted for treatment at NHS hospitals in England, including delivery and birth data. A record represents one episode.

The Scottish Birth Record (SBR) records baby's neonatal care in Scotland, including readmissions and transfers in one electronic record. SBR is completed for all births in Scotland including stillbirths and home births.

The Emergency Care Data Set (ECDS) is a national data set providing information to support the care provided in emergency departments by including the data items needed to understand capacity and demand and help improve patient care.

Legacy Pathology Test Results and all Radiology reports for Wales. Data coverage differs by geography: 2012 for Swansea (ABMU) 2017 for Newport (AB) 2012 for North Wales (BC) 2007 for Cwm Taf 2015/16 for Cardiff (CV) 2014 for West Wales (HD)

The Lothian Birth Cohort 1921 (LBC1921) study is a longitudinal study of cognitive, brain and general ageing. It aims to understand how our brain and thinking skills change throughout life, and why some brains age better than others.

The Maternity Inpatient and Day Case dataset (SMR02) collects episode level data every time a mother goes in for an obstetric event (this can be an antenatal, delivery or postnatal episode).

The dataset provides information about SARS-CoV-2 variants of concern and variants under investigation in Wales. This includes phylogenetic and mutational information about samples.

REACH (Resilience, Ethnicity and AdolesCent mental Health) is an ongoing study of adolescent mental health in inner-city London schools.

The Welsh Ambulance Services NHS Trust data covers data pertaining to more than 250,000 emergency calls a year, over 50,000 urgent calls and transport over 1.3 million non-emergency patients to over 200 treatment centres throughout England and Wales.

NHS 111 / Integrated Urgent Care data describes a range of statistics including NHS 111 and Out of Hours services, which aim to ensure a seamless patient experience with minimum handoffs and access to a clinician where required.

ALSPAC is a transgenerational prospective birth cohort study investigating influences on health and development across the life course. It has multiple datasets spanning 30 years of data collection using questionnaires, clinics and other sources ALSP ...

The Scottish Intensive Care Society Audit Group (SICSAG) has maintained a national database of patients admitted to adult general Intensive Care Units (ICU) in Scotland since 1995. Each line relates to a day of stay in critical care.

The General / Acute and Inpatient Day Case dataset (SMR01) collects episode level data on hospital inpatient and day case discharges from acute specialities from hospitals in Scotland.

The Mental Health Inpatient and Day Case dataset (SMR04) collects episode level data on patients who are receiving care at psychiatric hospitals at the point of both admission and discharge.

The Scottish Intensive Care Society Audit Group (SICSAG) has maintained a national database of patients admitted to adult general Intensive Care Units (ICU) in Scotland since 1995. Each line relates to an ‘episode of care’ in critical care.

Record-level patient data set of patients attending Accident and Emergency Departments (including minor injury units and walk-in centres) in England. A record represents one attendance.

The 1958 National Child Development Study (NCDS) follows the lives of 17,415 people born in England, Scotland and Wales in a single week of 1958. NCDS started in 1958 as the Perinatal Mortality Survey.

Hospitalised sepsis patients (2000-2020) by cause. Deeply phenotyped, longitudinal. Granular ethnicity and multi-morbidity. Serial acuity, physiology, blood parameters, treatments, interventions, ITU spells, outcomes, pre and post sepsis healthcare ...

The NWL Patient Index linked tables holds demographics for patients registered to a practices within NWL such as patient age, gender, first language and ethnicity. Lower Super Output Area and Index of Multiple Deprivation Rank is also included. When ...

Oxford University Hospitals NHS Foundation Trust (OUH) offers both symptomatic and asymptomatic SARS-CoV-2 testing programmes to staff at its four teaching hospitals in Oxfordshire, UK. OUH offers both symptomatic and asymptomatic SARS-CoV-2 staff te ...

Patients with hospital and ventilator acquired pneumonia (HAP) from 2000 to date. Granular care pathways. Multi-morbidity, investigations, interventions and treatments. Serial physiology, blood biomarkers, outcome data. Deeply phenotyped. Large cohor ...

Record-level patient data set of patients admitted for treatment and receiving Critical Care (intensive care or high dependency care) at NHS hospitals in England. A record represents one episode of Critical Care.

The Medicines Dispensed in Primary Care (NHSBSA) data comprises prescriptions for medicines that are dispensed or supplied by community pharmacists, appliance contractors and dispensing doctors in England. Since July 2020 NHS Digital has established ...

Patient-level data set that captures information about activity carried out by Maternity Services relating to mother and baby(s), from the first booking appointment until mother and baby(s) are discharged from the services. The Maternity Services Dat ...

The Secondary Uses Service (SUS +) is a collection of health care data required by hospitals and used for planning health care, supporting payments, commissioning policy development and research. The Secondary Uses Service (SUS +) is a collection of ...

The MHSDS includes patient level clinical and administrative data for patients, who are in contact with NHS funded mental health services in England. This data set defines the data items and values extracted from local electronic patient record syste ...

Contains data on patients who have been tested for COVID-19 (whether positive or negative) in participating health institutions in Brazil. This initiative makes available three kinds of pseudonymized data: demographics (gender, year of birth, and reg ...

The German Central Health Study Hub COVID-19 (Study Hub) is an inventory of German COVID-19 studies covering structured health data from administrative databases, clinical trials incl. vaccination studies, primary care, epidemiological studies, and p ...

The N3C Data Enclave is a secure portal containing a very large and extensive set of harmonized COVID-19 clinical electronic health record (EHR) data. The data can be accessed through a secure cloud Enclave hosted by NCATS and cannot be downloaded du ...

A data repository for the storage and sharing of Adaptive Immune Receptor Repertoire data. Primary public repository for the iReceptor Platform and Scientific Gateway. Further URL for the repository: http://www.ireceptor.org

The Canadian VirusSeq Data Portal (CVDP) is an open-access data portal funded by Genome Canada. It is intended to facilitate access to Canadian SARS-CoV-2 sequences and associated non-sensitive metadata adhering to the FAIR Data principles. Limited c ...

ZB MED's Repository for Life Sciences offers authors the chance to publish their scientific texts and research data from the fields of medicine, health, nutritional, environmental and agricultural sciences. In accordance with the principles of Open A ...

<<<!!!<<< Genome data generated by BC Genome Sciences Centre is no longer available through this site as it is regularly deposited into controlled data repositories such as the European Genome Phenome Archive (EGA); ICGC (International Cancer Genome ...

The Better Outcomes Registry & Network (BORN) is Ontario's prescribed perinatal, newborn and child registry with the role of facilitating quality care for families across the province. BORN collects, interprets, shares and rigorously protects high-qu ...

The GHO data repository provides access to over 50 datasets on priority health topics including mortality and burden of diseases, the Millennium Development Goals (child nutrition, child health, maternal and reproductive health, immunization, HIV/AID ...

CanPath is Canada’s largest population health cohort and a national platform for population-level health research.It is a unique Canadian platform allowing scientists to explore the complex factors that contribute to disease. It is a deeply character ...

This Web resource provides data and information relevant to SARS coronavirus. It includes links to the most recent sequence data and publications, to other SARS related resources, and a pre-computed alignment of genome sequences from various isolates ...