Cellosaurus
Names
More detailed information about this field from each metasource.
Cellosaurus
metasource: Fairsharing.org
version: FAIRsharing.org: Cellosaurus; Cellosaurus; DOI: https://doi.org/10.25504/FAIRsharing.hkk309; Last edited: April 9, 2020, 1:55 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:11.947582
The Cellosaurus On ExPASy
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
cellosaurus
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:11.947582
Names
More detailed information about this field from each metasource.
Cellosaurus
metasource: Fairsharing.orgversion: FAIRsharing.org: Cellosaurus; Cellosaurus; DOI: https://doi.org/10.25504/FAIRsharing.hkk309; Last edited: April 9, 2020, 1:55 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:11.947582
The Cellosaurus On ExPASy
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
cellosaurus
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:11.947582
Other names: The Cellosaurus On ExPASy, cellosaurus
Names
More detailed information about this field from each metasource.
Cellosaurus
metasource: Fairsharing.orgversion: FAIRsharing.org: Cellosaurus; Cellosaurus; DOI: https://doi.org/10.25504/FAIRsharing.hkk309; Last edited: April 9, 2020, 1:55 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:11.947582
The Cellosaurus On ExPASy
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
cellosaurus
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:11.947582
The Cellosaurus is a knowledge resource on cell lines. It attempts to describe all cell lines used in biomedical research. Its scope includes: Immortalized cell lines; naturally immortal cell lines (example: stem cell lines); finite life cell lines when those are distributed and used widely; vertebrate cell line with an emphasis on human, mouse and rat cell lines; and invertebrate (insects and ticks) cell lines. Its scope does not include primary cell lines (with the exception of the finite life cell lines described above) and plant cell lines.
Description
More detailed information about this field from each metasource.
The Cellosaurus is a knowledge resource on cell lines. It attempts to describe all cell lines used in biomedical research. Its scope includes: Immortalized cell lines; naturally immortal cell lines (example: stem cell lines); finite life cell lines when those are distributed and used widely; vertebrate cell line with an emphasis on human, mouse and rat cell lines; and invertebrate (insects and ticks) cell lines. Its scope does not include primary cell lines (with the exception of the finite life cell lines described above) and plant cell lines.
metasource: Fairsharing.orgversion: FAIRsharing.org: Cellosaurus; Cellosaurus; DOI: https://doi.org/10.25504/FAIRsharing.hkk309; Last edited: April 9, 2020, 1:55 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
The Cellosaurus is a knowledge resource on cell lines. It attempts to describe all cell lines used in biomedical research. Its scope includes: Immortalized cell lines, Naturally immortal cell lines (example: stem cell lines), Finite life cell lines when those are distributed and used widely, Vertebrate cell line with an emphasis on human, mouse and rat cell lines, Invertebrate (insects and ticks) cell lines. Its scope does not include: Primary cell lines (with the exception of the finite life cell lines described above), Plant cell lines. Cellosaurus was initiated to be used as a cell line controlled vocabulary in the context of the neXtProt knowledgebase, but it quickly become apparent that there was a need for a cell line knowledge resource that would serve the needs of individual researchers, cell line distributors and bioinformatic resources. This leads to an increase of the scope and depth of the content of the Cellosaurus. The Cellosaurus is a participant of the Resource Identification Initiative and contributes actively to the work of the International Cell Line Authentication Committee (ICLAC).
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
A knowledge resource on cell lines. It attempts to describe all cell lines used in biomedical research, including immortalized cell lines, naturally immortal cell lines (ie stem cell lines), finite life cell lines when those are distributed and widely used, vertebrate cell lines with an emphasis on human, mouse and rat cell lines, and invertebrate (insect and tick) cell lines.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:11.947582
Webpage:
https://web.expasy.org/cellosaurus/Webpage
More detailed information about this field from each metasource.
https://web.expasy.org/cellosaurus/
metasource: Fairsharing.orgversion: FAIRsharing.org: Cellosaurus; Cellosaurus; DOI: https://doi.org/10.25504/FAIRsharing.hkk309; Last edited: April 9, 2020, 1:55 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
http://web.expasy.org/cellosaurus/
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:11.947582
Licence:
Name: Creative Commons Attribution 4.0 International (CC BY 4.0)Licence name
More detailed information about this field from each metasource.
Creative Commons Attribution 4.0 International (CC BY 4.0)
metasource: Fairsharing.orgversion: FAIRsharing.org: Cellosaurus; Cellosaurus; DOI: https://doi.org/10.25504/FAIRsharing.hkk309; Last edited: April 9, 2020, 1:55 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
CC
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
Licence URL
More detailed information about this field from each metasource.
https://creativecommons.org/licenses/by/4.0/
metasource: Fairsharing.orgversion: FAIRsharing.org: Cellosaurus; Cellosaurus; DOI: https://doi.org/10.25504/FAIRsharing.hkk309; Last edited: April 9, 2020, 1:55 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
http://creativecommons.org/
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
Publications:
Publications
More detailed information about this field from each metasource.
The Cellosaurus, a Cell-Line Knowledge Resource
PMID: 29805321
metasource: Fairsharing.org
version: FAIRsharing.org: Cellosaurus; Cellosaurus; DOI: https://doi.org/10.25504/FAIRsharing.hkk309; Last edited: April 9, 2020, 1:55 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
CLASTR: The Cellosaurus STR similarity search tool - A precious help for cell line authentication
PMID: 31444973
metasource: Fairsharing.org
version: FAIRsharing.org: Cellosaurus; Cellosaurus; DOI: https://doi.org/10.25504/FAIRsharing.hkk309; Last edited: April 9, 2020, 1:55 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
http://dx.doi.org/10.1101/011700
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:11.947582
Publications
More detailed information about this field from each metasource.
The Cellosaurus, a Cell-Line Knowledge Resource
PMID: 29805321
metasource: Fairsharing.org
version: FAIRsharing.org: Cellosaurus; Cellosaurus; DOI: https://doi.org/10.25504/FAIRsharing.hkk309; Last edited: April 9, 2020, 1:55 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
CLASTR: The Cellosaurus STR similarity search tool - A precious help for cell line authentication
PMID: 31444973
metasource: Fairsharing.org
version: FAIRsharing.org: Cellosaurus; Cellosaurus; DOI: https://doi.org/10.25504/FAIRsharing.hkk309; Last edited: April 9, 2020, 1:55 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
http://dx.doi.org/10.1101/011700
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:11.947582
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The Cellosaurus, a Cell-Line Knowledge Resource
PubMed citations: 160.
160 articles citing: The Cellosaurus, a Cell-Line Knowledge Resource
Computational estimation of quality and clinical relevance of cancer cell lines. PMID:35822563
Volatilomic Signatures of AGS and SNU-1 Gastric Cancer Cell Lines. PMID:35807254
Cell line authentication: a necessity for reproducible biomedical research. PMID:35758134
Cellular Aquaculture: Prospects and Challenges. PMID:35744442
Centralizing neurofibromatosis experimental tool knowledge with the NF Research Tools Database. PMID:35735230
A scalable, open-source implementation of a large-scale mechanistic model for single cell proliferation and death signaling. PMID:35729113
GeMI: interactive interface for transformer-based Genomic Metadata Integration. PMID:35657113
Epithelial and Mesenchymal Features of Pancreatic Ductal Adenocarcinoma Cell Lines in Two- and Three-Dimensional Cultures. PMID:35629168
CancerOmicsNet: a multi-omics network-based approach to anti-cancer drug profiling. PMID:35601606
Allosteric regulation controls actin-bundling properties of human plastins. PMID:35589838
HerbKG: Constructing a Herbal-Molecular Medicine Knowledge Graph Using a Two-Stage Framework Based on Deep Transfer Learning. PMID:35571049
Genetic and Molecular Characterization of the Immortalized Murine Hepatic Stellate Cell Line GRX. PMID:35563813
Ongoing transposition in cell culture reveals the phylogeny of diverse Drosophila S2 sublines. PMID:35536183
[Identification of microRNAs targeting vitamin D receptor and their effect on parathyroid hormone secretion in secondary hyperparathyroidism]. PMID:35527486
SigCom LINCS: data and metadata search engine for a million gene expression signatures. PMID:35524556
A novel approach to predicting the synergy of anti-cancer drug combinations using document-based feature extraction. PMID:35513784
An integrated network representation of multiple cancer-specific data for graph-based machine learning. PMID:35487924
A pan-cancer survey of cell line tumor similarity by feature-weighted molecular profiles. PMID:35475239
Establishment and characterization of a novel patient-derived Ewing sarcoma cell line, NCC-ES2-C1. PMID:35441357
Search and sequence analysis tools services from EMBL-EBI in 2022. PMID:35412617
An established kidney cell line from humpback grouper (Cromileptes altivelis) and its susceptibility to bacteria and heavy metals. PMID:35391635
Multi-omics analysis identifies distinct subtypes with clinical relevance in lung adenocarcinoma harboring KEAP1/NFE2L2. PMID:35371318
Major histocompatibility complex class I molecule expression by pancreatic cancer cells is regulated by activation and inhibition of the epidermal growth factor receptor. PMID:35303241
MicroRNA childhood cancer catalog (M3Cs): a resource for translational bioinformatics toward health informatics in pediatric cancer. PMID:35303059
Establishment and characterization of NCC-DDLPS5-C1: a novel patient-derived cell line of dedifferentiated liposarcoma. PMID:35292923
Cytoskeletal dynamics regulates stromal invasion behavior of distinct liver cancer subtypes. PMID:35241781
Patient-Derived In Vitro and In Vivo Models of Cancer. PMID:35230691
Establishment and Characterization of NCC-PMP1-C1: A Novel Patient-Derived Cell Line of Metastatic Pseudomyxoma Peritonei. PMID:35207746
Modeling Progression of Single Cell Populations Through the Cell Cycle as a Sequence of Switches. PMID:35178429
Development and characterization of a new gill cell line from the striped catfish, Pangasianodon hypophthalmus (Sauvage, 1878). PMID:35169909
An Integrated In Silico, In Vitro and Tumor Tissues Study Identified Selenoprotein S (SELENOS) and Valosin-Containing Protein (VCP/p97) as Novel Potential Associated Prognostic Biomarkers in Triple Negative Breast Cancer. PMID:35158912
Comparative study of SARS-CoV-2 infection in different cell types: Biophysical-computational approach to the role of potential receptors. PMID:35077937
Establishment and characterization of NCC-DMM1-C1, a novel patient-derived cell line of desmoplastic malignant pleural mesothelioma. PMID:35069873
Establishment and Characterization of NCC-MFS5-C1: A Novel Patient-Derived Cell Line of Myxofibrosarcoma. PMID:35053323
Role and relevance of fish cell lines in advanced in vitro research. PMID:35013860
MFUM-BrTNBC-1, a Newly Established Patient-Derived Triple-Negative Breast Cancer Cell Line: Molecular Characterisation, Genetic Stability, and Comprehensive Comparison with Commercial Breast Cancer Cell Lines. PMID:35011679
CXCR4 promotes the growth and metastasis of esophageal squamous cell carcinoma as a critical downstream mediator of HIF-1α. PMID:34990040
Gene Network Analysis of Hepatocellular Carcinoma Identifies Modules Associated with Disease Progression, Survival, and Chemo Drug Resistance. PMID:34898998
Supervised learning with word embeddings derived from PubMed captures latent knowledge about protein kinases and cancer. PMID:34888523
PharmacoDB 2.0: improving scalability and transparency of in vitro pharmacogenomics analysis. PMID:34850112
A novel transposable element-based authentication protocol for Drosophila cell lines. PMID:34849844
Establishment and Characterization of NCC-DDLPS4-C1: A Novel Patient-Derived Cell Line of Dedifferentiated Liposarcoma. PMID:34834427
Genetic Diversity in Chimpanzee Transcriptomics Does Not Represent Wild Populations. PMID:34788801
In Vivo and In Vitro Models of Hepatocellular Carcinoma: Current Strategies for Translational Modeling. PMID:34771745
Atlas of Lobular Breast Cancer Models: Challenges and Strategic Directions. PMID:34771558
Discovery of putative tumor suppressors from CRISPR screens reveals rewired lipid metabolism in acute myeloid leukemia cells. PMID:34764293
The IntAct database: efficient access to fine-grained molecular interaction data. PMID:34761267
ReMap 2022: a database of Human, Mouse, Drosophila and Arabidopsis regulatory regions from an integrative analysis of DNA-binding sequencing experiments. PMID:34751401
BioSamples database: FAIRer samples metadata to accelerate research data management. PMID:34747489
Divergent leukaemia subclones as cellular models for testing vulnerabilities associated with gains in chromosomes 7, 8 or 18. PMID:34707142
Isolation in Natural Host Cell Lines of Wolbachia Strains wPip from the Mosquito Culex pipiens and wPap from the Sand Fly Phlebotomus papatasi. PMID:34680640
(In)Distinctive Role of Long Non-Coding RNAs in Common and Rare Ovarian Cancers. PMID:34680193
NPCDR: natural product-based drug combination and its disease-specific molecular regulation. PMID:34664659
Is Uveal Melanoma a Hormonally Sensitive Cancer? A Review of the Impact of Sex Hormones and Pregnancy on Uveal Melanoma. PMID:34604195
A simple method for ex vivo honey bee cell culture capable of in vitro gene expression analysis. PMID:34555120
Inhibition of SARS-CoV-2 Infection by Human Defensin HNP1 and Retrocyclin RC-101. PMID:34487793
Minimal information for chemosensitivity assays (MICHA): a next-generation pipeline to enable the FAIRification of drug screening experiments. PMID:34472587
Identifying novel transcript biomarkers for hepatocellular carcinoma (HCC) using RNA-Seq datasets and machine learning. PMID:34445986
Three-Dimensional Culture of Rhipicephalus (Boophilus) microplus BmVIII-SCC Cells on Multiple Synthetic Scaffold Systems and in Rotating Bioreactors. PMID:34442313
Progression and Differentiation of Alveolar Rhabdomyosarcoma Is Regulated by PAX7 Transcription Factor-Significance of Tumor Subclones. PMID:34440639
Sfaira accelerates data and model reuse in single cell genomics. PMID:34433466
Molecular analysis of cell survival and death pathways in the proteasome inhibitor bortezomib-resistant PC3 prostate cancer cell line. PMID:34363546
Establishment and characterization of novel patient-derived cell lines from giant cell tumor of bone. PMID:34304386
The Progenetix oncogenomic resource in 2021. PMID:34272855
Secondary resistance to anti-EGFR therapy by transcriptional reprogramming in patient-derived colorectal cancer models. PMID:34271981
Functional genomics approaches to improve pre-clinical drug screening and biomarker discovery. PMID:34254730
UniBind: maps of high-confidence direct TF-DNA interactions across nine species. PMID:34174819
Contiguous erosion of the inactive X in human pluripotency concludes with global DNA hypomethylation. PMID:34107261
Assessing Consistency Across Functional Screening Datasets in Cancer Cells. PMID:34081116
DrugComb update: a more comprehensive drug sensitivity data repository and analysis portal. PMID:34060634
Correlation AnalyzeR: functional predictions from gene co-expression correlations. PMID:33879054
Expasy, the Swiss Bioinformatics Resource Portal, as designed by its users. PMID:33849055
Inhibition of HSP90 as a Strategy to Radiosensitize Glioblastoma: Targeting the DNA Damage Response and Beyond. PMID:33816244
Large-scale labeling and assessment of sex bias in publicly available expression data. PMID:33784977
GLUT5 (SLC2A5) enables fructose-mediated proliferation independent of ketohexokinase. PMID:33762003
The glycoconjugate ontology (GlycoCoO) for standardizing the annotation of glycoconjugate data and its application. PMID:33677548
Association of expression of epigenetic molecular factors with DNA methylation and sensitivity to chemotherapeutic agents in cancer cell lines. PMID:33676569
Gynaecological cancers and their cell lines. PMID:33650759
The PD-L1 metabolic interactome intersects with choline metabolism and inflammation. PMID:33608051
DNA origami signposts for identifying proteins on cell membranes by electron cryotomography. PMID:33606980
Authentication, characterization and contamination detection of cell lines, xenografts and organoids by barcode deep NGS sequencing. PMID:33575611
Contextualized Protein-Protein Interactions. PMID:33511361
Comparative analysis of drug response and gene profiling of HER2-targeted tyrosine kinase inhibitors. PMID:33473169
Minimal information for Chemosensitivity assays (MICHA): A next-generation pipeline to enable the FAIRification of drug screening experiments. PMID:33300000
Mining potentially actionable kinase gene fusions in cancer cell lines with the KuNG FU database. PMID:33257674
Infection with Helicobacter pylori Induces Epithelial to Mesenchymal Transition in Human Cholangiocytes. PMID:33233485
GTRD: an integrated view of transcription regulation. PMID:33231677
Characterization of a new cell line from ornamental fish Amphiprion ocellaris (Cuvier, 1830) and its susceptibility to nervous necrosis virus. PMID:33208823
Low Dose Combined Treatment with Ultraviolet-C and Withaferin a Enhances Selective Killing of Oral Cancer Cells. PMID:33202766
CellMiner Cross-Database (CellMinerCDB) version 1.2: Exploration of patient-derived cancer cell line pharmacogenomics. PMID:33196823
Quantitative Structure-Mutation-Activity Relationship Tests (QSMART) model for protein kinase inhibitor response prediction. PMID:33183223
Genomic characterization of five commonly used endometrial cancer cell lines. PMID:33174010
iCSDB: an integrated database of CRISPR screens. PMID:33137185
Short tandem repeat profiling for the authentication of cancer stem-like cells. PMID:33128777
CEN-tools: an integrative platform to identify the contexts of essential genes. PMID:33073517
Screening of Fish Cell Lines for Piscine Orthoreovirus-1 (PRV-1) Amplification: Identification of the Non-Supportive PRV-1 Invitrome. PMID:33053677
Let's Talk About Sex-Biological Sex Is Underreported in Biomaterial Studies. PMID:33043626
Current status and future outlook for patient-derived cancer models from a rare cancer research perspective. PMID:32986888
CMNPD: a comprehensive marine natural products database towards facilitating drug discovery from the ocean. PMID:32986829
MET canonical transcript expression is a predictive biomarker for chemo-sensitivity to MET-inhibitors in hepatocellular carcinoma cell lines. PMID:32980960
Elucidating the Basis for Permissivity of the MT-4 T-Cell Line to Replication of an HIV-1 Mutant Lacking the gp41 Cytoplasmic Tail. PMID:32938764
Matching cell lines with cancer type and subtype of origin via mutational, epigenomic, and transcriptomic patterns. PMID:32937430
Current Status and Perspectives of Patient-Derived Models for Ewing's Sarcoma. PMID:32899796
RNA Sequencing of Hepatobiliary Cancer Cell Lines: Data and Applications to Mutational and Transcriptomic Profiling. PMID:32899426
Intein-mediated cytoplasmic reconstitution of a split toxin enables selective cell ablation in mixed populations and tumor xenografts. PMID:32839344
The intersectional genetics landscape for humans. PMID:32761099
RTH-149 Cell Line, a Useful Tool to Decipher Molecular Mechanisms Related to Fish Nutrition. PMID:32707879
Establishment and characterization of NCC-ASPS1-C1: a novel patient-derived cell line of alveolar soft-part sarcoma. PMID:32648033
The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST). PMID:32637990
Integration of the PubAnnotation ecosystem in the development of a web-based search tool for alternative methods. PMID:32634872
Isolation, characterization, and cryopreservation of collared peccary skin-derived fibroblast cell lines. PMID:32547858
Current status and perspectives of patient-derived rare cancer models. PMID:32537685
Osteogenesis imperfecta mutations in plastin 3 lead to impaired calcium regulation of actin bundling. PMID:32509377
Genomic characterization of a newly established esophageal squamous cell carcinoma cell line from China and published esophageal squamous cell carcinoma cell lines. PMID:32489320
SYNERGxDB: an integrative pharmacogenomic portal to identify synergistic drug combinations for precision oncology. PMID:32442307
The cell line A-to-I RNA editing catalogue. PMID:32383740
Necessity of guidelines for publication of patient-derived cancer models. PMID:32309306
Expression of Concern: Potential Tumor Suppressor NESG1 as an Unfavorable Prognosis Factor in Nasopharyngeal Carcinoma. PMID:32282843
Sublethal Radiation Affects Antigen Processing and Presentation Genes to Enhance Immunogenicity of Cancer Cells. PMID:32272797
Pichia fermentans originates apoptosis in human oral squamous cell carcinoma by over-expressing BAX and CASP 9 genes. PMID:32253629
Expression of concern: Reduced CTGF expression promotes cell growth, migration, and invasion in nasopharyngeal carcinoma. PMID:32240269
Expression of Concern: ZEB2 Mediates Multiple Pathways Regulating Cell Proliferation, Migration, Invasion, and Apoptosis in Glioma. PMID:32236135
Genome-wide expression profiling reveals increased stability and mitochondrial energy metabolism of the human liver cell line HepaRG-CAR. PMID:32130581
epiCOLOC: Integrating Large-Scale and Context-Dependent Epigenomics Features for Comprehensive Colocalization Analysis. PMID:32117461
High Fidelity of Mouse Models Mimicking Human Genetic Skeletal Disorders. PMID:32117046
Endometriotic cell culture contamination and authenticity: a source of bias in in vitro research? PMID:32106286
Establishment and characterization of patient-derived cancer models of malignant peripheral nerve sheath tumors. PMID:32099531
Establishment and characterization of NCC-CDS2-C1: a novel patient-derived cell line of CIC-DUX4 sarcoma. PMID:31898195
An investigation of the mechanisms underlying the proteasome inhibitor bortezomib resistance in PC3 prostate cancer cell line. PMID:31863311
Endometrial cancer and its cell lines. PMID:31848918
Increased temperature-related adeno-associated virus vectors transduction of ovarian cancer cells - essential signatures of AAV receptor and heat shock proteins. PMID:31772643
ReMap 2020: a database of regulatory regions from an integrative analysis of Human and Arabidopsis DNA-binding sequencing experiments. PMID:31665499
Establishment and characterization of novel patient-derived extraskeletal osteosarcoma cell line NCC-ESOS1-C1. PMID:31625124
Integrated Biobanking and Tumor Model Establishment of Human Colorectal Carcinoma Provides Excellent Tools for Preclinical Research. PMID:31601052
Authentication Analysis of MT-4 Cells Distributed by the National Institutes of Health AIDS Reagent Program. PMID:31554688
The ABCD database: a repository for chemically defined antibodies. PMID:31410491
The role of GRHL2 and epigenetic remodeling in epithelial-mesenchymal plasticity in ovarian cancer cells. PMID:31372511
Next generation community assessment of biomedical entity recognition web servers: metrics, performance, interoperability aspects of BeCalm. PMID:31236786
Cell Lines as Biological Models: Practical Steps for More Reliable Research. PMID:31203605
PubTator central: automated concept annotation for biomedical full text articles. PMID:31114887
Sphingomyelin Synthase 1 (SMS1) Downregulation Is Associated With Sphingolipid Reprogramming and a Worse Prognosis in Melanoma. PMID:31114500
Absence of integrin α3β1 promotes the progression of HER2-driven breast cancer in vivo. PMID:31101121
DrugComb: an integrative cancer drug combination data portal. PMID:31066443
An Interactive Resource to Probe Genetic Diversity and Estimated Ancestry in Cancer Cell Lines. PMID:30894373
AICM: A Genuine Framework for Correcting Inconsistency Between Large Pharmacogenomics Datasets. PMID:30864327
Replication Study: The microRNA miR-34a inhibits prostate cancer stem cells and metastasis by directly repressing CD44. PMID:30860027
Systematic Review of the Current Status of Human Sarcoma Cell Lines. PMID:30781855
Incidences of problematic cell lines are lower in papers that use RRIDs to identify cell lines. PMID:30693867
Robust in-silico identification of Cancer Cell Lines based on RNA and targeted DNA sequencing data. PMID:30674903
OGER++: hybrid multi-type entity recognition. PMID:30666476
Development and biochemical and immunological characterization of early passage and immortalized bovine intestinal epithelial cell lines from the ileum of a young calf. PMID:30600465
Generating and working with Drosophila cell cultures: Current challenges and opportunities. PMID:30561900
BioSamples database: an updated sample metadata hub. PMID:30407529
Establishment of a novel patient-derived Ewing's sarcoma cell line, NCC-ES1-C1. PMID:30324244
Cell Model Passports-a hub for clinical, genetic and functional datasets of preclinical cancer models. PMID:30260411
Establishment and characterization of patient-derived xenograft and its cell line of primary leiomyosarcoma of bone. PMID:29845452
Correlation of gene expression and associated mutation profiles of APOBEC3A, APOBEC3B, REV1, UNG, and FHIT with chemosensitivity of cancer cell lines to drug treatment. PMID:29642934
Usage of cell nomenclature in biomedical literature. PMID:29322912
Using machine learning algorithms to identify genes essential for cell survival. PMID:28984184
Data on the number and frequency of scientific literature citations for established medulloblastoma cell lines. PMID:27812533 -
CLASTR: The Cellosaurus STR similarity search tool - A precious help for cell line authentication
PubMed citations: 18.
18 articles citing: CLASTR: The Cellosaurus STR similarity search tool - A precious help for cell line authentication
Computational estimation of quality and clinical relevance of cancer cell lines. PMID:35822563
Cell line authentication: a necessity for reproducible biomedical research. PMID:35758134
Cellular Aquaculture: Prospects and Challenges. PMID:35744442
Preclinical models of epithelial ovarian cancer: practical considerations and challenges for a meaningful application. PMID:35705879
Genetic and Molecular Characterization of the Immortalized Murine Hepatic Stellate Cell Line GRX. PMID:35563813
Multiomic Profiling Identified EGF Receptor Signaling as a Potential Inhibitor of Type I Interferon Response in Models of Oncolytic Therapy by Vesicular Stomatitis Virus. PMID:35563635
Multi-omics analysis identifies distinct subtypes with clinical relevance in lung adenocarcinoma harboring KEAP1/NFE2L2. PMID:35371318
MFUM-BrTNBC-1, a Newly Established Patient-Derived Triple-Negative Breast Cancer Cell Line: Molecular Characterisation, Genetic Stability, and Comprehensive Comparison with Commercial Breast Cancer Cell Lines. PMID:35011679
GDI2 is a novel diagnostic and prognostic biomarker in hepatocellular carcinoma. PMID:34894398
Somatic Hypomethylation of Pericentromeric SST1 Repeats and Tetraploidization in Human Colorectal Cancer Cells. PMID:34771515
Neuroblastoma signalling models unveil combination therapies targeting feedback-mediated resistance. PMID:34735429
EBiSC best practice: How to ensure optimal generation, qualification, and distribution of iPSC lines. PMID:34380020
The Cancer SENESCopedia: A delineation of cancer cell senescence. PMID:34320349
Single and double modified salinomycin analogs target stem-like cells in 2D and 3D breast cancer models. PMID:34130123
Low Dose Combined Treatment with Ultraviolet-C and Withaferin a Enhances Selective Killing of Oral Cancer Cells. PMID:33202766
Genomic characterization of five commonly used endometrial cancer cell lines. PMID:33174010
Short tandem repeat profiling for the authentication of cancer stem-like cells. PMID:33128777
Newly established gastrointestinal cancer cell lines retain the genomic and immunophenotypic landscape of their parental cancers. PMID:33087752 - http://dx.doi.org/10.1101/011700
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More detailed information about this field from each metasource.
cell line
metasource: Fairsharing.org
version: FAIRsharing.org: Cellosaurus; Cellosaurus; DOI: https://doi.org/10.25504/FAIRsharing.hkk309; Last edited: April 9, 2020, 1:55 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
covid-19
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
insect cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
str
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
adeno-associated virus packaging cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
adenovirus packaging cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
amphibian cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
bat cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
bird cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
cancer stem cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
cetacean cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
clinical grade hesc cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
crustacean cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
endangered species/breed cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
fish cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
haploid karyotype cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
human/rodent somatic cell hybrids
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
hybridoma fusion partner cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
marsupial cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
mollusk cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
nematode cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
non-human primate cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
recombinant protein production insect cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
reptilian cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
retrovirus packaging cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
serum/protein free medium cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
short tandem repeat
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
space-flown cell line (cellonaut)s
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
tick cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
triple negative breast cancer (tnbc) cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
vaccine production cell lines
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
anatomy
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:11.947582
gene expression
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:11.947582
pathology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:11.947582
systems biology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:11.947582
cell biology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:11.947582
Tags
More detailed information about this field from each metasource.
cell line
metasource: Fairsharing.orgversion: FAIRsharing.org: Cellosaurus; Cellosaurus; DOI: https://doi.org/10.25504/FAIRsharing.hkk309; Last edited: April 9, 2020, 1:55 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: re3data.org
version: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
covid-19
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
insect cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
str
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
adeno-associated virus packaging cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
adenovirus packaging cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
amphibian cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
bat cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
bird cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
cancer stem cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
cetacean cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
clinical grade hesc cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
crustacean cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
endangered species/breed cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
fish cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
haploid karyotype cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
human/rodent somatic cell hybrids
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
hybridoma fusion partner cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
marsupial cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
mollusk cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
nematode cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
non-human primate cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
recombinant protein production insect cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
reptilian cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
retrovirus packaging cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
serum/protein free medium cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
short tandem repeat
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
space-flown cell line (cellonaut)s
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
tick cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
triple negative breast cancer (tnbc) cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
vaccine production cell lines
metasource: re3data.orgversion: re3data.org: Cellosaurus; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMR1 last accessed: 2022-11-04
anatomy
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:11.947582
gene expression
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:11.947582
pathology
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:11.947582
systems biology
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:11.947582
cell biology
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:11.947582
cell line covid-19 insect cell lines str adeno-associated virus packaging cell lines adenovirus packaging cell lines amphibian cell lines bat cell lines bird cell lines cancer stem cell lines cetacean cell lines clinical grade hesc cell lines crustacean cell lines endangered species/breed cell lines fish cell lines haploid karyotype cell lines human/rodent somatic cell hybrids hybridoma fusion partner cell lines marsupial cell lines mollusk cell lines nematode cell lines non-human primate cell lines recombinant protein production insect cell lines reptilian cell lines retrovirus packaging cell lines serum/protein free medium cell lines short tandem repeat space-flown cell line (cellonaut)s tick cell lines triple negative breast cancer (tnbc) cell lines vaccine production cell lines anatomy gene expression pathology systems biology cell biology
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