R35P54 last accessed: 2022-11-04

metasource: BiŌkeanós-Medsourcing
version: 0.0.1:2022-11-04T13:34:25.975929

Mouse Genome Database (MGD)
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:09.541292

mgd
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:09.541292

Other names: MGI, Mouse Genome Database, Mouse Genome Informatics, Mouse Genome Database (MGD), mgd

MGI is the international database resource for the laboratory mouse, providing integrated genetic, genomic, and biological data to facilitate the study of human health and disease.

Webpage:

http://www.informatics.jax.org/

Licence:

Name: MGI - specific. Non permissive for commercial purposes
URL: http://www.informatics.jax.org/mgihome/other/copyright.shtml

Publications: (15)

Publications
More detailed information about this field from each metasource.

Mouse Genome Database (MGD) 2019
PMID: 30407599
metasource: BiŌkeanós-Medsourcing
version: 0.0.1:2022-11-04T13:34:25.975929

The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouse
PMID: 22075990
metasource: Fairsharing.org
version: FAIRsharing.org: MGI; Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource; DOI: https://doi.org/10.25504/FAIRsharing.fcwyhz; Last edited: June 22, 2021, 11:57 a.m.; Last accessed: Jan 03 2022 7:07 p.m.

metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:09.541292

The Mouse Genome Database (MGD): premier model organism resource for mammalian genomics and genetics
PMID: 21051359
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:09.541292

Mouse Genome Database (MGD)-2017: community knowledge resource for the laboratory mouse
PMID: 27899570
metasource: Fairsharing.org
version: FAIRsharing.org: MGI; Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource; DOI: https://doi.org/10.25504/FAIRsharing.fcwyhz; Last edited: June 22, 2021, 11:57 a.m.; Last accessed: Jan 03 2022 7:07 p.m.

The Mouse Genome Database: integration of and access to knowledge about the laboratory mouse
PMID: 24285300
metasource: Fairsharing.org
version: FAIRsharing.org: MGI; Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource; DOI: https://doi.org/10.25504/FAIRsharing.fcwyhz; Last edited: June 22, 2021, 11:57 a.m.; Last accessed: Jan 03 2022 7:07 p.m.

The Mouse Genome Database (MGD): from genes to mice--a community resource for mouse biology
PMID: 15608240
metasource: Fairsharing.org
version: FAIRsharing.org: MGI; Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource; DOI: https://doi.org/10.25504/FAIRsharing.fcwyhz; Last edited: June 22, 2021, 11:57 a.m.; Last accessed: Jan 03 2022 7:07 p.m.

MGD: the Mouse Genome Database
PMID: 12519980
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:09.541292

The mouse Gene Expression Database (GXD): 2019 update
PMID: 30335138
metasource: BiŌkeanós-Medsourcing
version: 0.0.1:2022-11-04T13:34:25.975929

The Mouse Genome Database: enhancements and updates
PMID: 19864252
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:09.541292

The mouse genome database: genotypes, phenotypes, and models of human disease
PMID: 23175610
metasource: Fairsharing.org
version: FAIRsharing.org: MGI; Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource; DOI: https://doi.org/10.25504/FAIRsharing.fcwyhz; Last edited: June 22, 2021, 11:57 a.m.; Last accessed: Jan 03 2022 7:07 p.m.

Mouse Genome Informatics (MGI): Resources for Mining Mouse Genetic, Genomic, and Biological Data in Support of Primary and Translational Research
PMID: 27933520
metasource: Fairsharing.org
version: FAIRsharing.org: MGI; Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource; DOI: https://doi.org/10.25504/FAIRsharing.fcwyhz; Last edited: June 22, 2021, 11:57 a.m.; Last accessed: Jan 03 2022 7:07 p.m.

A database for mouse development
PMID: 8091224
metasource: Fairsharing.org
version: FAIRsharing.org: MGI; Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource; DOI: https://doi.org/10.25504/FAIRsharing.fcwyhz; Last edited: June 22, 2021, 11:57 a.m.; Last accessed: Jan 03 2022 7:07 p.m.

Mouse Genome Informatics (MGI) Resource: Genetic, Genomic, and Biological Knowledgebase for the Laboratory Mouse
PMID: 28838066
metasource: Fairsharing.org
version: FAIRsharing.org: MGI; Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource; DOI: https://doi.org/10.25504/FAIRsharing.fcwyhz; Last edited: June 22, 2021, 11:57 a.m.; Last accessed: Jan 03 2022 7:07 p.m.

The Mouse Tumor Biology Database: A Comprehensive Resource for Mouse Models of Human Cancer
PMID: 29092943
metasource: BiŌkeanós-Medsourcing
version: 0.0.1:2022-11-04T13:34:25.975929

https://doi.org/10.1093/nar/gkaa1083
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

Mouse Genome Database (MGD) 2019 PubMed citations: 273.

273 articles citing: Mouse Genome Database (MGD) 2019

Lineage-specific rearrangement of chromatin loops and epigenomic features during adipocytes and osteoblasts commitment. PMID:35906483
SLC25A12 Missense Variant in Nova Scotia Duck Tolling Retrievers Affected by Cerebellar Degeneration-Myositis Complex (CDMC). PMID:35886006
QTL Mapping for Age-Related Eye Pigmentation in the Pink-Eyed Dilution Castaneus Mutant Mouse. PMID:35885921
Synaptotagmin 2 is ectopically overexpressed in excitatory presynapses of a widely used CaMKΙΙα-Cre mouse line. PMID:35856033
Whole-genome sequencing reveals de-novo mutations associated with nonsyndromic cleft lip/palate. PMID:35817949
Cytokine Receptor-Like Factor 3 (CRLF3) Contributes to Early Zebrafish Hematopoiesis. PMID:35795682
G3BP2, a stress granule assembly factor, is dispensable for spermatogenesis in mice. PMID:35782098
Exploring automatic inconsistency detection for literature-based gene ontology annotation. PMID:35758780
Rodent Modeling of Alzheimer's Disease in Down Syndrome: In vivo and ex vivo Approaches. PMID:35747206
Advancing our understanding of genetic risk factors and potential personalized strategies for pelvic organ prolapse. PMID:35739095
QTL-mapping in the obese Berlin Fat Mouse identifies additional candidate genes for obesity and fatty liver disease. PMID:35729251
Cre/lox regulated conditional rescue and inactivation with zebrafish UFlip alleles generated by CRISPR-Cas9 targeted integration. PMID:35713402
Mass spectrometry-based draft of the mouse proteome. PMID:35710609
Adipocyte HIF2α functions as a thermostat via PKA Cα regulation in beige adipocytes. PMID:35672324
PTPα promotes fibroproliferative responses after acute lung injury. PMID:35670474
A Simple Standard for Sharing Ontological Mappings (SSSOM). PMID:35616100
ImShot: An Open-Source Software for Probabilistic Identification of Proteins In Situ and Visualization of Proteomics Data. PMID:35569805
Identifying genetic determinants of inflammatory pain in mice using a large-scale gene-targeted screen. PMID:35552317
NOTCH-YAP1/TEAD-DNMT1 Axis Drives Hepatocyte Reprogramming Into Intrahepatic Cholangiocarcinoma. PMID:35550144
Genome-wide identification of associations between enhancer and alternative splicing in human and mouse. PMID:35534820
Maternal iron status in early pregnancy and DNA methylation in offspring: an epigenome-wide meta-analysis. PMID:35505416
Neuronal apoptosis drives remodeling states of microglia and shifts in survival pathway dependence. PMID:35481836
SLC2A3 variants in familial and sporadic congenital heart diseases in a Chinese Yunnan population. PMID:35466476
Models of Renal Cell Carcinoma Used to Investigate Molecular Mechanisms and Develop New Therapeutics. PMID:35463327
Predicted mouse interactome and network-based interpretation of differentially expressed genes. PMID:35390003
NeuroSCORE is a genome-wide omics-based model that identifies candidate disease genes of the central nervous system. PMID:35361823
Inflammation and Brain Structure in Schizophrenia and Other Neuropsychiatric Disorders: A Mendelian Randomization Study. PMID:35353173
The repertoire of testicular extracellular vesicle cargoes and their involvement in inter-compartmental communication associated with spermatogenesis. PMID:35351114
Functional Enrichment Analysis of Regulatory Elements. PMID:35327392
Reduced reproductive success is associated with selective constraint on human genes. PMID:35322230
Emerging insights into the function and structure of the Integrator complex. PMID:35311473
Bivalent EGFR-Targeting DARPin-MMAE Conjugates. PMID:35269611
Genome-Wide Association Study-Guided Exome Rare Variant Burden Analysis Identifies IL1R1 and CD3E as Potential Autoimmunity Risk Genes for Celiac Disease. PMID:35237542
Structural Predictions of the SNX-RGS Proteins Suggest They Belong to a New Class of Lipid Transfer Proteins. PMID:35223850
Mapping the gene network landscape of Alzheimer's disease through integrating genomics and transcriptomics. PMID:35213535
Whole Genome Sequencing Unravels New Genetic Determinants of Early-Onset Familial Osteoporosis and Low BMD in Malta. PMID:35205249
Genomic characterization of the world's longest selection experiment in mouse reveals the complexity of polygenic traits. PMID:35189878
Zebrafish information network, the knowledgebase for Danio rerio research. PMID:35166825
Genetic Influence on Frequencies of Myeloid-Derived Cell Subpopulations in Mouse. PMID:35154069
Single-cell RNA sequencing reveals time- and sex-specific responses of mouse spinal cord microglia to peripheral nerve injury and links ApoE to chronic pain. PMID:35149686
Network inference with Granger causality ensembles on single-cell transcriptomics. PMID:35139376
Mouse genomic and cellular annotations. PMID:35124726
Translational relevance of forward genetic screens in animal models for the study of psychiatric disease. PMID:35124155
A preliminary model of football-related neural stress that integrates metabolomics with transcriptomics and virtual reality. PMID:35106455
Single-cell transcriptomics of human iPSC differentiation dynamics reveal a core molecular network of Parkinson's disease. PMID:35027645
Mutations in the ribosome biogenesis factor gene LTV1 are linked to LIPHAK syndrome, a novel poikiloderma-like disorder. PMID:34999892
Meta-analysis of whole-genome gene expression datasets assessing the effects of IDH1 and IDH2 mutations in isogenic disease models. PMID:34997121
Loss-of-function mutation in Pcsk1 increases serum APOA1 level and LCAT activity in mice. PMID:34996527
Research-Relevant Conditions and Pathology of Laboratory Mice, Rats, Gerbils, Guinea Pigs, Hamsters, Naked Mole Rats, and Rabbits. PMID:34979559
DeepSVP: Integration of genotype and phenotype for structural variant prioritization using deep learning. PMID:34951628
The effects of Tbx15 and Pax1 on facial and other physical morphology in mice. PMID:34938962
A cis-regulatory-directed pipeline for the identification of genes involved in cardiac development and disease. PMID:34906219
A Co-Association Network Analysis Reveals Putative Regulators for Health-Related Traits in Pigs. PMID:34899750
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources. PMID:34897464
The genomic basis of high-elevation adaptation in wild house mice (Mus musculus domesticus) from South America. PMID:34897431
Identifying essential genes across eukaryotes by machine learning. PMID:34859210
A Standardized Brain Molecular Atlas: A Resource for Systems Modeling and Simulation. PMID:34858137
Repeated exposure with short-term behavioral stress resolves pre-existing stress-induced depressive-like behavior in mice. PMID:34795225
Relating multivariate shapes to genescapes using phenotype-biological process associations for craniofacial shape. PMID:34779766
Murine Oncostatin M Has Opposing Effects on the Proliferation of OP9 Bone Marrow Stromal Cells and NIH/3T3 Fibroblasts Signaling through the OSMR. PMID:34769079
Identification of Signaling Pathways for Early Embryonic Lethality and Developmental Retardation in Sephs1-/- Mice. PMID:34769078
The Rat Genome Database (RGD) facilitates genomic and phenotypic data integration across multiple species for biomedical research. PMID:34741192
The nucleoporin Nup50 activates the Ran guanine nucleotide exchange factor RCC1 to promote NPC assembly at the end of mitosis. PMID:34725842
ConVarT: a search engine for matching human genetic variants with variants from non-human species. PMID:34718716
Integration of genetic, transcriptomic, and clinical data provides insight into 16p11.2 and 22q11.2 CNV genes. PMID:34715901
Sperm epigenetic alterations contribute to inter- and transgenerational effects of paternal exposure to long-term psychological stress via evading offspring embryonic reprogramming. PMID:34711814
Heritability and De Novo Mutations in Oesophageal Atresia and Tracheoesophageal Fistula Aetiology. PMID:34680991
Integrative Map of HIF1A Regulatory Elements and Variations. PMID:34680921
Gut-microbiota-microglia-brain interactions in Alzheimer's disease: knowledge-based, multi-dimensional characterization. PMID:34670619
Experimental and computational modeling for signature and biomarker discovery of renal cell carcinoma progression. PMID:34670568
SAP30 Gene Is a Probable Regulator of Muscle Hypertrophy in Chickens. PMID:34646299
Hearing loss in Africa: current genetic profile. PMID:34609590
The Effect of Population Structure on Murine Genome-Wide Association Studies. PMID:34589118
Optimizing Efficient RNAi-Mediated Control of Hemipteran Pests (Psyllids, Leafhoppers, Whitefly): Modified Pyrimidines in dsRNA Triggers. PMID:34579315
Genome-Wide Survey for Microdeletions or -Duplications in 155 Patients with Lower Urinary Tract Obstructions (LUTO). PMID:34573432
A biallelic SNIP1 Amish founder variant causes a recognizable neurodevelopmental disorder. PMID:34570759
Predict long-range enhancer regulation based on protein-protein interactions between transcription factors. PMID:34570239
A ROR2 coding variant is associated with craniofacial variation in domestic pigeons. PMID:34551284
Genetic variants associated with inflammatory bowel disease and gut graft-versus-host disease. PMID:34535014
Pleiotropy data resource as a primer for investigating co-morbidities/multi-morbidities and their role in disease. PMID:34524473
A microenvironment-inspired synthetic three-dimensional model for pancreatic ductal adenocarcinoma organoids. PMID:34518665
A systems approach using Diversity Outbred mice distinguishes the cardiovascular effects and genetics of circulating GDF11 from those of its homolog, myostatin. PMID:34510201
Positive selection of skeleton-related genes during duck domestication revealed by whole genome sequencing. PMID:34488647
A recurrent de novo ATP5F1A substitution associated with neonatal complex V deficiency. PMID:34483339
A Meta-Analysis of Bioelectric Data in Cancer, Embryogenesis, and Regeneration. PMID:34476377
Release of Notch activity coordinated by IL-1β signalling confers differentiation plasticity of airway progenitors via Fosl2 during alveolar regeneration. PMID:34475534
Deciphering osteoarthritis genetics across 826,690 individuals from 9 populations. PMID:34450027
Novel FGFR1 Variants Are Associated with Congenital Scoliosis. PMID:34440300
Ten simple rules for creating reusable pathway models for computational analysis and visualization. PMID:34411100
Multi-scale inference of genetic trait architecture using biologically annotated neural networks. PMID:34411094
PhenoDB, GeneMatcher and VariantMatcher, tools for analysis and sharing of sequence data. PMID:34407837
Diffusion enables integration of heterogeneous data and user-driven learning in a desktop knowledge-base. PMID:34379637
Re-analysis of whole-exome sequencing data reveals a novel splicing variant in the SLC2A1 in a patient with GLUT1 Deficiency Syndrome 1 accompanied by hemangioma: a case report. PMID:34332575
Functionathon: a manual data mining workflow to generate functional hypotheses for uncharacterized human proteins and its application by undergraduate students. PMID:34318869
Evolutionary Perspective and Expression Analysis of Intronless Genes Highlight the Conservation of Their Regulatory Role. PMID:34306008
Genome-scale metabolic network reconstruction of model animals as a platform for translational research. PMID:34282017
Ancestry analysis indicates two different sets of essential genes in eukaryotic model species. PMID:34279742
The methyl donor S-adenosyl methionine reverses the DNA methylation signature of chronic neuropathic pain in mouse frontal cortex. PMID:34278163
Genomic and pleiotropic analyses of resting QT interval identifies novel loci and overlap with atrial electrical disorders. PMID:34274964
Discovery and prioritization of variants and genes for kidney function in >1.2 million individuals. PMID:34272381
Prioritizing and characterizing functionally relevant genes across human tissues. PMID:34270548
The tweety Gene Family: From Embryo to Disease. PMID:34262434
Pleiotropy method reveals genetic overlap between orofacial clefts at multiple novel loci from GWAS of multi-ethnic trios. PMID:34242216
Regional specific differentiation of integumentary organs: SATB2 is involved in α- and β-keratin gene cluster switching in the chicken. PMID:34240503
Mitochondrial calcium uniporter deletion prevents painful diabetic neuropathy by restoring mitochondrial morphology and dynamics. PMID:34232927
Strategies to Uplift Novel Mendelian Gene Discovery for Improved Clinical Outcomes. PMID:34220947
Identification of 371 genetic variants for age at first sex and birth linked to externalising behaviour. PMID:34211149
Whole-exome sequencing reveals common and rare variants in immunologic and neurological genes implicated in achalasia. PMID:34197731
E3 ubiquitin ligase Wwp1 regulates ciliary dynamics of the Hedgehog receptor Smoothened. PMID:34161574
Studying Müllerian duct anomalies - from cataloguing phenotypes to discovering causation. PMID:34160006
A Systems-Based Key Innovation-Driven Approach Infers Co-option of Jaw Developmental Programs During Cancer Progression. PMID:34150777
Damage-Net: A program for DNA repair meta-analysis identifies a network of novel repair genes that facilitate cancer evolution. PMID:34147942
Genome-wide association study identifies five risk loci for pernicious anemia. PMID:34145262
Revisiting the Characteristics of Testicular Germ Cell Lines GC-1(spg) and GC-2(spd)ts. PMID:34125394
Meis2 Is Required for Inner Ear Formation and Proper Morphogenesis of the Cochlea. PMID:34124068
Transgenic mouse models of breast cancer. PMID:34090924
Divergent and overlapping hippocampal and cerebellar transcriptome responses following developmental ethanol exposure during the secondary neurogenic period. PMID:34060105
Population genomics of invasive rodents on islands: Genetic consequences of colonization and prospects for localized synthetic gene drive. PMID:34025776
Developmental basis of trachea-esophageal birth defects. PMID:34023332
The SARS-CoV-2 SSHHPS Recognized by the Papain-like Protease. PMID:34019767
CNVxplorer: a web tool to assist clinical interpretation of CNVs in rare disease patients. PMID:34019647
Modeling regulatory network topology improves genome-wide analyses of complex human traits. PMID:33990562
Updates to HCOP: the HGNC comparison of orthology predictions tool. PMID:33959747
Prolactin-Releasing Peptide Differentially Regulates Gene Transcriptomic Profiles in Mouse Bone Marrow-Derived Macrophages. PMID:33923285
A worldwide map of swine short tandem repeats and their associations with evolutionary and environmental adaptations. PMID:33892623
Synergizing Mouse and Human Studies to Understand the Heterogeneity of Obesity. PMID:33885739
Glioblastomas acquire myeloid-affiliated transcriptional programs via epigenetic immunoediting to elicit immune evasion. PMID:33857425
A compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome. PMID:33850120
The landscape of molecular chaperones across human tissues reveals a layered architecture of core and variable chaperones. PMID:33846299
Altered sacral neural crest development in Pax3 spina bifida mutants underlies deficits of bladder innervation and function. PMID:33839113
Tet1 Deficiency Leads to Premature Ovarian Failure. PMID:33834024
A resource of targeted mutant mouse lines for 5,061 genes. PMID:33833456
Control of Protein and Energy Metabolism in the Pituitary Gland in Response to Three-Week Running Training in Adult Male Mice. PMID:33810540
Multivariate Analysis Identifies Eight Novel Loci Associated with Meat Productivity Traits in Sheep. PMID:33806625
Designing and generating a mouse model: frequently asked questions. PMID:33797414
Identification of Novel Pleiotropic SNPs Associated with Osteoporosis and Rheumatoid Arthritis. PMID:33740106
Evolution and Expression of the Immune System of a Facultatively Anadromous Salmonid. PMID:33717060
Limited Evidence for Parallel Evolution Among Desert-Adapted Peromyscus Deer Mice. PMID:33686424
Molecular Actions Underlying Wolffian Duct Regression in Sexual Differentiation of Murine Reproductive Tracts. PMID:33684916
Improving gene function predictions using independent transcriptional components. PMID:33674610
rs1944919 on chromosome 11q23.1 and its effector genes COLCA1/COLCA2 confer susceptibility to primary biliary cholangitis. PMID:33633225
Revealing the role of the human blood plasma proteome in obesity using genetic drivers. PMID:33627659
Gene expression patterns associated with Leishmania panamensis infection in macrophages from BALB/c and C57BL/6 mice. PMID:33617537
7p21.3 Together With a 12p13.32 Deletion in a Patient With Microcephaly-Does 12p13.32 Locus Possibly Comprises a Candidate Gene Region for Microcephaly? PMID:33613193
Canine DVL2 variant contributes to brachycephalic phenotype and caudal vertebral anomalies. PMID:33599851
Identification of Gene Signatures and Expression Patterns During Epithelial-to-Mesenchymal Transition From Single-Cell Expression Atlas. PMID:33584803
LAMA: automated image analysis for the developmental phenotyping of mouse embryos. PMID:33574040
Identification of the transgene insertion site for an adipocyte-specific adiponectin-cre model and characterization of the functional consequences. PMID:33565916
HGNChelper: identification and correction of invalid gene symbols for human and mouse. PMID:33564398
Comparative Analysis Identifies Similarities between the Human and Murine Microglial Sensomes. PMID:33540859
GeneWalk identifies relevant gene functions for a biological context using network representation learning. PMID:33526072
Human pathways in animal models: possibilities and limitations. PMID:33524155
Single cell RNA-sequencing data generated from human pluripotent stem cell-derived lens epithelial cells. PMID:33521174
SRGAP1 Controls Small Rho GTPases To Regulate Podocyte Foot Process Maintenance. PMID:33514561
Probabilistic harmonization and annotation of single-cell transcriptomics data with deep generative models. PMID:33491336
Integrative analysis of genome-wide association studies identifies novel loci associated with neuropsychiatric disorders. PMID:33479212
Transcriptomic profiling of long- and short-lived mutant mice implicates mitochondrial metabolism in ageing and shows signatures of normal ageing in progeroid mice. PMID:33454277
Infection trains the host for microbiota-enhanced resistance to pathogens. PMID:33453153
Differential intolerance to loss of function and missense mutations in genes that encode human matricellular proteins. PMID:33415696
Genomic imbalances in the placenta are associated with poor fetal growth. PMID:33413077
PICKLE 3.0: Enriching the human Meta-database with the mouse protein interactome extended via mouse-human orthology. PMID:33367505
Comprehensive Profiling of Gene Expression in the Cerebral Cortex and Striatum of BTBRTF/ArtRbrc Mice Compared to C57BL/6J Mice. PMID:33362469
Evidence of Superior and Inferior Sinoatrial Nodes in the Mammalian Heart. PMID:33357580
The Genetic Dissection of Ace2 Expression Variation in the Heart of Murine Genetic Reference Population. PMID:33330645
Frameshift Variant in Novel Adenosine-A1-Receptor Homolog Associated With Bovine Spastic Syndrome/Late-Onset Bovine Spastic Paresis in Holstein Sires. PMID:33329738
PathExt: a general framework for path-based mining of omics-integrated biological networks. PMID:33305329
Whole-genome sequencing analysis of the cardiometabolic proteome. PMID:33303764
The Gene Ontology resource: enriching a GOld mine. PMID:33290552
Alternative splicing in endothelial cells: novel therapeutic opportunities in cancer angiogenesis. PMID:33287867
ATP-Dependent Chromatin Remodeler CHD9 Controls the Proliferation of Embryonic Stem Cells in a Cell Culture Condition-Dependent Manner. PMID:33261017
A comprehensive library of human transcription factors for cell fate engineering. PMID:33257861
Investigation of COVID-19 comorbidities reveals genes and pathways coincident with the SARS-CoV-2 viral disease. PMID:33257774
The genetic architecture of sporadic and multiple consecutive miscarriage. PMID:33239672
Age-associated changes in the transcriptomes of non-cultured adipose-derived stem cells from young and old mice assessed via single-cell transcriptome analysis. PMID:33237970
Proteomic analysis of young and old mouse hematopoietic stem cells and their progenitors reveals post-transcriptional regulation in stem cells. PMID:33236985
Transforming the study of organisms: Phenomic data models and knowledge bases. PMID:33232313
Mouse Genome Database (MGD): Knowledgebase for mouse-human comparative biology. PMID:33231642
DeepPheno: Predicting single gene loss-of-function phenotypes using an ontology-aware hierarchical classifier. PMID:33206638
Investigating transcriptome-wide sex dimorphism by multi-level analysis of single-cell RNA sequencing data in ten mouse cell types. PMID:33153500
Genenames.org: the HGNC and VGNC resources in 2021. PMID:33152070
GRNdb: decoding the gene regulatory networks in diverse human and mouse conditions. PMID:33151298
Dissecting Herpes Simplex Virus 1-Induced Host Shutoff at the RNA Level. PMID:33148793
Meta-analysis uncovers genome-wide significant variants for rapid kidney function decline. PMID:33137338
Connexin Genes Variants Associated with Non-Syndromic Hearing Impairment: A Systematic Review of the Global Burden. PMID:33126609
The Important Role of Perituberal Tissue in Epileptic Patients with Tuberous Sclerosis Complex by the Transcriptome Analysis. PMID:33123575
Genes and Pathways Implicated in Tetralogy of Fallot Revealed by Ultra-Rare Variant Burden Analysis in 231 Genome Sequences. PMID:33110418
FlyRNAi.org-the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update. PMID:33104800
The mouse Gene Expression Database (GXD): 2021 update. PMID:33104772
Prenatal Androgenization Alters the Development of GnRH Neuron and Preoptic Area RNA Transcripts in Female Mice. PMID:33095238
KLIFS: an overhaul after the first 5 years of supporting kinase research. PMID:33084889
OGEE v3: Online GEne Essentiality database with increased coverage of organisms and human cell lines. PMID:33084874
Inferring the Allelic Series at QTL in Multiparental Populations. PMID:33082282
Exome sequencing implicates genetic disruption of prenatal neuro-gliogenesis in sporadic congenital hydrocephalus. PMID:33077954
Protein ontology on the semantic web for knowledge discovery. PMID:33046717
Protocol to Design, Clone, and Validate sgRNAs for In Vivo Reverse Genetic Studies. PMID:33043306
tRFtarget: a database for transfer RNA-derived fragment targets. PMID:33035346
Kctd15 regulates nephron segment development by repressing Tfap2a activity. PMID:33028614
Style transfer with variational autoencoders is a promising approach to RNA-Seq data harmonization and analysis. PMID:33026062
Genomic Targets of Positive Selection in Giant Mice from Gough Island. PMID:33022034
Investigation of COVID-19 comorbidities reveals genes and pathways coincident with the SARS-CoV-2 viral disease. PMID:32995795
Identification of novel candidate risk genes for myelomeningocele within the glucose homeostasis/oxidative stress and folate/one-carbon metabolism networks. PMID:32960507
Molecular basis of a new ovine model for human 3M syndrome-2. PMID:32933480
Genetic variation regulates opioid-induced respiratory depression in mice. PMID:32917924
Sphingosine kinase 2 restricts T cell immunopathology but permits viral persistence. PMID:32897877
Computational Methods and Software Tools for Functional Analysis of miRNA Data. PMID:32872205
Single cell transcriptomics identifies a signaling network coordinating endoderm and mesoderm diversification during foregut organogenesis. PMID:32855417
Genome-wide association meta-analysis for early age-related macular degeneration highlights novel loci and insights for advanced disease. PMID:32843070
DNA repair gene expression is increased in HPV positive head and neck squamous cell carcinomas. PMID:32838940
Age and Genetic Background Modify Hybrid Male Sterility in House Mice. PMID:32817010
Ribosomal proteins: mutant phenotypes by the numbers and associated gene expression changes. PMID:32810425
Quantitative Proteomics Links the LRRC59 Interactome to mRNA Translation on the ER Membrane. PMID:32788342
Maternal dietary omega-3 deficiency worsens the deleterious effects of prenatal inflammation on the gut-brain axis in the offspring across lifetime. PMID:32781459
Building the vertebrate codex using the gene breaking protein trap library. PMID:32779569
HISTome2: a database of histone proteins, modifiers for multiple organisms and epidrugs. PMID:32746900
BRG1 Loss Predisposes Lung Cancers to Replicative Stress and ATR Dependency. PMID:32690724
The role of indoleamine 2,3 dioxygenase 1 in the osteoarthritis. PMID:32655775
Chronic intermittent ethanol and lipopolysaccharide exposure differentially alter Iba1-derived microglia morphology in the prelimbic cortex and nucleus accumbens core of male Long-Evans rats. PMID:32621337
Transcriptome Based Profiling of the Immune Cell Gene Signature in Rat Experimental Colitis and Human IBD Tissue Samples. PMID:32610492
Hub Proteins Involved in RAW 264.7 Macrophages Exposed to Direct Current Electric Field. PMID:32599940
TET2 deficiency reprograms the germinal center B cell epigenome and silences genes linked to lymphomagenesis. PMID:32596441
Drosophila models of pathogenic copy-number variant genes show global and non-neuronal defects during development. PMID:32579612
Automated generation of gene summaries at the Alliance of Genome Resources. PMID:32559296
A Survey of Essential Genome Stability Genes Reveals That Replication Stress Mitigation Is Critical for Peri-Implantation Embryogenesis. PMID:32548123
Bioinformatics Analyses of the Transcriptome Reveal Ube3a-Dependent Effects on Mitochondrial-Related Pathways. PMID:32532103
Sex Chromosomes and Sex Phenotype Contribute to Biased DNA Methylation in Mouse Liver. PMID:32527045
Differential regulation of the immune system in a brain-liver-fats organ network during short-term fasting. PMID:32526449
GJB4 and GJC3 variants in non-syndromic hearing impairment in Ghana. PMID:32524838
Phase and context shape the function of composite oncogenic mutations. PMID:32461694
Circadian Clock Regulation of Developmental Time in the Kidney. PMID:32433970
The transition from acute to chronic pain: dynamic epigenetic reprogramming of the mouse prefrontal cortex up to 1 year after nerve injury. PMID:32427748
Closing in on Mechanisms of Open Neural Tube Defects. PMID:32423763
AnnoLnc2: the one-stop portal to systematically annotate novel lncRNAs for human and mouse. PMID:32406920
Glycobiology and schizophrenia: a biological hypothesis emerging from genomic research. PMID:32377000
Nuclear-encoded mitochondrial ribosomal proteins are required to initiate gastrulation. PMID:32376682
Polymorphisms in miRNA binding sites involved in metabolic diseases in mice and humans. PMID:32350386
Inferring spatial and signaling relationships between cells from single cell transcriptomic data. PMID:32350282
Breakpoint Mapping of Symptomatic Balanced Translocations Links the EPHA6, KLF13 and UBR3 Genes to Novel Disease Phenotype. PMID:32344861
GlyGen data model and processing workflow. PMID:32324859
Developmentally Driven Changes in Adipogenesis in Different Fat Depots Are Related to Obesity. PMID:32273869
The Ah Receptor: Adaptive Metabolism, Ligand Diversity, and the Xenokine Model. PMID:32259433
A Genome-Wide Screen in Mice To Identify Cell-Extrinsic Regulators of Pulmonary Metastatic Colonisation. PMID:32245826
Conditional Single Vector CRISPR/SaCas9 Viruses for Efficient Mutagenesis in the Adult Mouse Nervous System. PMID:32209486
Interaction Between CRIPT and PSD-95 Is Required for Proper Dendritic Arborization in Hippocampal Neurons. PMID:32157575
The UCSF Mouse Inventory Database Application, an Open Source Web App for Sharing Mutant Mice Within a Research Community. PMID:32152007
Modeling clear cell renal cell carcinoma and therapeutic implications. PMID:32123314
Ancestral stress programs sex-specific biological aging trajectories and non-communicable disease risk. PMID:32087063
NCBP2 modulates neurodevelopmental defects of the 3q29 deletion in Drosophila and Xenopus laevis models. PMID:32053595
Optimizing Nervous System-Specific Gene Targeting with Cre Driver Lines: Prevalence of Germline Recombination and Influencing Factors. PMID:32027825
Incremental data integration for tracking genotype-disease associations. PMID:31986132
Monogenic causes of non-obstructive azoospermia: challenges, established knowledge, limitations and perspectives. PMID:31955275
In Vitro, In Vivo, and In Silico Methods for Assessment of Muscle Size and Muscle Growth Regulation. PMID:31939770
SGID: a comprehensive and interactive database of the silkworm. PMID:31836898
Genetic Diversity and Signatures of Selection in 15 Chinese Indigenous Dog Breeds Revealed by Genome-Wide SNPs. PMID:31803243
The Alliance of Genome Resources: Building a Modern Data Ecosystem for Model Organism Databases. PMID:31796553
The JAX Synteny Browser for mouse-human comparative genomics. PMID:31776723
The ParaHox gene Cdx4 induces acute erythroid leukemia in mice. PMID:31770439
The Year of the Rat: The Rat Genome Database at 20: a multi-species knowledgebase and analysis platform. PMID:31713623
New developments on the Encyclopedia of DNA Elements (ENCODE) data portal. PMID:31713622
The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species. PMID:31701156
Mouse Phenome Database: a data repository and analysis suite for curated primary mouse phenotype data. PMID:31696236
The DisGeNET knowledge platform for disease genomics: 2019 update. PMID:31680165
Genes essential for embryonic stem cells are associated with neurodevelopmental disorders. PMID:31649057
Ubiquitin Ligases Involved in the Regulation of Wnt, TGF-β, and Notch Signaling Pathways and Their Roles in Mouse Development and Homeostasis. PMID:31623112
Biological Network Approaches and Applications in Rare Disease Studies. PMID:31614842
Compromised function of the ESCRT pathway promotes endolysosomal escape of tau seeds and propagation of tau aggregation. PMID:31578281
Alliance of Genome Resources Portal: unified model organism research platform. PMID:31552413
Mendelian Gene Discovery: Fast and Furious with No End in Sight. PMID:31491408
Calvarial osteoblast gene expression in patients with craniosynostosis leads to novel polygenic mouse model. PMID:31442251
Sleeping Beauty Mouse Models of Cancer: Microenvironmental Influences on Cancer Genetics. PMID:31338332
Tripal v3: an ontology-based toolkit for construction of FAIR biological community databases. PMID:31328773
Genetic diagnosis in first or second trimester pregnancy loss using exome sequencing: a systematic review of human essential genes. PMID:31273585
Fine mapping titin's C-zone: Matching cardiac myosin-binding protein C stripes with titin's super-repeats. PMID:31158359
Mouse germ line mutations due to retrotransposon insertions. PMID:31011371
The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouse PubMed citations: 160.

160 articles citing: The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouse

Imprinted Gene Expression and Function of the Dopa Decarboxylase Gene in the Developing Heart. PMID:34239874
Human myelomeningocele risk and ultra-rare deleterious variants in genes associated with cilium, WNT-signaling, ECM, cytoskeleton and cell migration. PMID:33574475
Identification of 38 novel loci for systemic lupus erythematosus and genetic heterogeneity between ancestral groups. PMID:33536424
Discovery of a Role for Rab3b in Habituation and Cocaine Induced Locomotor Activation in Mice Using Heterogeneous Functional Genomic Analysis. PMID:32742255
Prioritization of causal genes for coronary artery disease based on cumulative evidence from experimental and in silico studies. PMID:32591598
Systematic analysis of lncRNA and microRNA dynamic features reveals diagnostic and prognostic biomarkers of myocardial infarction. PMID:31927529
Molecular Etiology Disclosed by Array CGH in Patients With Silver-Russell Syndrome or Similar Phenotypes. PMID:31749829
Transcriptome analysis of the effect of C-C chemokine receptor 5 deficiency on cell response to Toxoplasma gondii in brain cells. PMID:31506064
Raet1e Polymorphisms Are Associated with Increased Risk of Developing Premature Coronary Artery Disease and with Some Cardiometabolic Parameters: The GEA Mexican Study. PMID:30662365
Multi-omics integration reveals molecular networks and regulators of psoriasis. PMID:30642337
Systematic identification and analysis of dysregulated miRNA and transcription factor feed-forward loops in hypertrophic cardiomyopathy. PMID:30338905
Transcriptional profiling of Toll-like receptor 2-deficient primary murine brain cells during Toxoplasma gondii infection. PMID:29136637
Mouse Genome Informatics (MGI) Resource: Genetic, Genomic, and Biological Knowledgebase for the Laboratory Mouse. PMID:28838066
Mouse Chromosome 4 Is Associated with the Baseline and Allergic IgE Phenotypes. PMID:28696925
Drug repurposing for aging research using model organisms. PMID:28620943
Comparative transcriptomic analysis of mice liver treated with different AMPK activators in a mice model of atherosclerosis. PMID:28178661
Update on the genetic architecture of rheumatoid arthritis. PMID:27811914
Predicting essential proteins based on subcellular localization, orthology and PPI networks. PMID:27586883
Identification and functional analysis of long non-coding RNAs in human and mouse early embryos based on single-cell transcriptome data. PMID:27542205
Nuclear import sequence identification in hOAS3 protein. PMID:27379722
Reporting phenotypes in mouse models when considering body size as a potential confounder. PMID:26865945
Genome-wide association studies in the Japanese population identify seven novel loci for type 2 diabetes. PMID:26818947
"Reverse Genomics" Predicts Function of Human Conserved Noncoding Elements. PMID:26744417
Novel Genetic Loci Control Calcium Absorption and Femur Bone Mass as Well as Their Response to Low Calcium Intake in Male BXD Recombinant Inbred Mice. PMID:26636428
Gene-by-Diet Interactions Affect Serum 1,25-Dihydroxyvitamin D Levels in Male BXD Recombinant Inbred Mice. PMID:26587785
miR-17-92 fine-tunes MYC expression and function to ensure optimal B cell lymphoma growth. PMID:26555894
Mapping of Craniofacial Traits in Outbred Mice Identifies Major Developmental Genes Involved in Shape Determination. PMID:26523602
Regularization Methods for High-Dimensional Instrumental Variables Regression With an Application to Genetical Genomics. PMID:26392642
Methylomic analysis of salivary DNA in childhood ADHD identifies altered DNA methylation in VIPR2. PMID:26304033
Prediction of Causal Candidate Genes in Coronary Artery Disease Loci. PMID:26293461
MicroRNA and transcription factor mediated regulatory network analysis reveals critical regulators and regulatory modules in myocardial infarction. PMID:26258537
Visualization of Sensory Neurons and Their Projections in an Upper Motor Neuron Reporter Line. PMID:26222784
Deep sequencing reveals cell-type-specific patterns of single-cell transcriptome variation. PMID:26056000
Using whole-genome sequences of the LG/J and SM/J inbred mouse strains to prioritize quantitative trait genes and nucleotides. PMID:26016481
Use of genome-wide association studies for cancer research and drug repositioning. PMID:25803826
Inducible and reversible lentiviral and Recombination Mediated Cassette Exchange (RMCE) systems for controlling gene expression. PMID:25768837
Development of a novel pink-eyed dilution mouse model showing progressive darkening of the eyes and coat hair with aging. PMID:25739360
A bioinformatics expert system linking functional data to anatomical outcomes in limb regeneration. PMID:25729585
Unc93b1 -Dependent Endosomal Toll-Like Receptor Signaling Regulates Inflammation and Mortality during Coxsackievirus B3 Infection. PMID:25675947
Combined QTL and selective sweep mappings with coding SNP annotation and cis-eQTL analysis revealed PARK2 and JAG2 as new candidate genes for adiposity regulation. PMID:25653314
Chromosome substitution strain assessment of a Huntington's disease modifier locus. PMID:25645993
From dinosaurs to birds: a tail of evolution. PMID:25621146
Transcriptome and histopathological changes in mouse brain infected with Neospora caninum. PMID:25604996
Amyloid precursor protein interaction network in human testis: sentinel proteins for male reproduction. PMID:25591988
Uropathogenic Escherichia coli superinfection enhances the severity of mouse bladder infection. PMID:25569799
RGS4 inhibits angiotensin II signaling and macrophage localization during renal reperfusion injury independent of vasospasm. PMID:25469849
The IPD and IMGT/HLA database: allele variant databases. PMID:25414341
Dissecting the human protein-protein interaction network via phylogenetic decomposition. PMID:25412639
Roles of intragenic and intergenic L1s in mouse and human. PMID:25409429
CpG island-mediated global gene regulatory modes in mouse embryonic stem cells. PMID:25405324
A systems biology strategy to identify molecular mechanisms of action and protein indicators of traumatic brain injury. PMID:25399920
Fine mapping and candidate gene search of quantitative trait loci for growth and obesity using mouse intersubspecific subcongenic intercrosses and exome sequencing. PMID:25398139
Systems level analysis and identification of pathways and networks associated with liver fibrosis. PMID:25380136
The Mouse Genome Database (MGD): facilitating mouse as a model for human biology and disease. PMID:25348401
Organ system heterogeneity DB: a database for the visualization of phenotypes at the organ system level. PMID:25313158
The structure, stability and pheromone binding of the male mouse protein sex pheromone darcin. PMID:25279835
Phenotyping structural abnormalities in mouse embryos using high-resolution episcopic microscopy. PMID:25256713
Epigenome-wide DNA methylation in hearing ability: new mechanisms for an old problem. PMID:25184702
Sequential transcriptional changes dictate safe and effective antigen-specific immunotherapy. PMID:25182274
Unbiased functional clustering of gene variants with a phenotypic-linkage network. PMID:25166029
Differences in gene expression between mouse and human for dynamically regulated genes in early embryo. PMID:25089626
Human dominant disease genes are enriched in paralogs originating from whole genome duplication. PMID:25080083
Phenotypic instability between the near isogenic substrains BALB/cJ and BALB/cByJ. PMID:24997021
Genome-wide patterns of differentiation among house mouse subspecies. PMID:24996909
The Chlamydomonas genome project: a decade on. PMID:24950814
CEBPA exerts a specific and biologically important proapoptotic role in pancreatic β cells through its downstream network targets. PMID:24943845
Allen Brain Atlas-Driven Visualizations: a web-based gene expression energy visualization tool. PMID:24904397
Discovery of transgene insertion sites by high throughput sequencing of mate pair libraries. PMID:24884803
Regression hidden Markov modeling reveals heterogeneous gene expression regulation: a case study in mouse embryonic stem cells. PMID:24884369
Mining the 3'UTR of autism-implicated genes for SNPs perturbing microRNA regulation. PMID:24747189
The serine/threonine kinase Ndr2 controls integrin trafficking and integrin-dependent neurite growth. PMID:24719112
Precise genetic mapping and integrative bioinformatics in Diversity Outbred mice reveals Hydin as a novel pain gene. PMID:24700285
Phenotype ontologies and cross-species analysis for translational research. PMID:24699242
Candidate chromosome 1 disease susceptibility genes for Sjogren's syndrome xerostomia are narrowed by novel NOD.B10 congenic mice. PMID:24685748
Obesity-associated variants within FTO form long-range functional connections with IRX3. PMID:24646999
Rich annotation of DNA sequencing variants by leveraging the Ensembl Variant Effect Predictor with plugins. PMID:24626529
COMPARTMENTS: unification and visualization of protein subcellular localization evidence. PMID:24573882
Fine-mapping quantitative trait loci affecting murine external ear tissue regeneration in the LG/J by SM/J advanced intercross line. PMID:24569637
Derivation and characterization of mouse embryonic stem cells from permissive and nonpermissive strains. PMID:24504480
Comparing the biological impact of glatiramer acetate with the biological impact of a generic. PMID:24421904
A computational framework to infer human disease-associated long noncoding RNAs. PMID:24392133
Genetics of rheumatoid arthritis contributes to biology and drug discovery. PMID:24390342
POMO--Plotting Omics analysis results for Multiple Organisms. PMID:24365393
IQ motif-containing G (Iqcg) is required for mouse spermiogenesis. PMID:24362311
Histone lysine demethylase (KDM) subfamily 4: structures, functions and therapeutic potential. PMID:24349617
A genome-wide regulatory network identifies key transcription factors for memory CD8⁺ T-cell development. PMID:24335726
Transformation of the fallopian tube secretory epithelium leads to high-grade serous ovarian cancer in Brca;Tp53;Pten models. PMID:24332043
Reprogramming of lysosomal gene expression by interleukin-4 and Stat6. PMID:24314139
The Burmese python genome reveals the molecular basis for extreme adaptation in snakes. PMID:24297902
Wild mice as bountiful resources of novel genetic variants for quantitative traits. PMID:24294103
The Mouse Genome Database: integration of and access to knowledge about the laboratory mouse. PMID:24285300
Mouse phenome database. PMID:24243846
The IUPHAR/BPS Guide to PHARMACOLOGY: an expert-driven knowledgebase of drug targets and their ligands. PMID:24234439
The roles of FMRP-regulated genes in autism spectrum disorder: single- and multiple-hit genetic etiologies. PMID:24207117
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. PMID:24194600
Genetic dissection of quantitative trait Loci for hemostasis and thrombosis on mouse chromosomes 11 and 5 using congenic and subcongenic strains. PMID:24147020
Systematic identification of transcriptional regulatory modules from protein-protein interaction networks. PMID:24137002
Modeling anterior development in mice: diet as modulator of risk for neural tube defects. PMID:24124024
A Uchl1-Histone2BmCherry:GFP-gpi BAC transgene for imaging neuronal progenitors. PMID:24123561
Eeyore: a novel mouse model of hereditary deafness. PMID:24086324
Dual analysis of the murine cytomegalovirus and host cell transcriptomes reveal new aspects of the virus-host cell interface. PMID:24086132
Direct cloning of isogenic murine DNA in yeast and relevance of isogenicity for targeting in embryonic stem cells. PMID:24058528
Manteia, a predictive data mining system for vertebrate genes and its applications to human genetic diseases. PMID:24038354
The cytoskeletal protein RHAMM and ERK1/2 activity maintain the pluripotency of murine embryonic stem cells. PMID:24019927
The relative contribution of proximal 5' flanking sequence and microsatellite variation on brain vasopressin 1a receptor (Avpr1a) gene expression and behavior. PMID:24009523
Genic intolerance to functional variation and the interpretation of personal genomes. PMID:23990802
Gene expression analyses of mouse aortic endothelium in response to atherogenic stimuli. PMID:23990205
Genomic deregulation of the E2F/Rb pathway leads to activation of the oncogene EZH2 in small cell lung cancer. PMID:23967231
Altered expression of Raet1e, a major histocompatibility complex class 1-like molecule, underlies the atherosclerosis modifier locus Ath11 10b. PMID:23948654
Mouse genetics and proteomic analyses demonstrate a critical role for complement in a model of DHRD/ML, an inherited macular degeneration. PMID:23943789
A comparative phenotypic and genomic analysis of C57BL/6J and C57BL/6N mouse strains. PMID:23902802
Genetic programs in human and mouse early embryos revealed by single-cell RNA sequencing. PMID:23892778
Transcriptome analysis of mouse brain infected with Toxoplasma gondii. PMID:23856619
Bioinformatics for spermatogenesis: annotation of male reproduction based on proteomics. PMID:23852026
GoSynthetic database tool to analyse natural and engineered molecular processes. PMID:23813641
Evaluation of the contribution of the ATP binding cassette transporter, P-glycoprotein, to in vivo cholesterol homeostasis. PMID:23750858
Cataloging the biomedical world of pain through semi-automated curation of molecular interactions. PMID:23707966
MetaRanker 2.0: a web server for prioritization of genetic variation data. PMID:23703204
International Union of Basic and Clinical Pharmacology. LXXXVIII. G protein-coupled receptor list: recommendations for new pairings with cognate ligands. PMID:23686350
InterMOD: integrated data and tools for the unification of model organism research. PMID:23652793
High mobility group N proteins modulate the fidelity of the cellular transcriptional profile in a tissue- and variant-specific manner. PMID:23620591
PhenoMiner: quantitative phenotype curation at the rat genome database. PMID:23603846
Parent of origin influences the cardiac expression of vascular endothelial growth factor (Vegfa). PMID:23560444
Fv1 restriction and retrovirus vaccine immunity in Apobec3-deficient 129P2 mice. PMID:23533681
Copy-number variation of cancer-gene orthologs is sufficient to induce cancer-like symptoms in Saccharomyces cerevisiae. PMID:23531409
Genetic determinants of phosphate response in Drosophila. PMID:23520455
Bloomsbury report on mouse embryo phenotyping: recommendations from the IMPC workshop on embryonic lethal screening. PMID:23519032
Next-generation phenotyping: requirements and strategies for enhancing our understanding of genotype-phenotype relationships and its relevance to crop improvement. PMID:23471459
Stability, delivery and functions of human sperm RNAs at fertilization. PMID:23471003
Towards a bioinformatics of patterning: a computational approach to understanding regulative morphogenesis. PMID:23429669
The repertoires of ubiquitinating and deubiquitinating enzymes in eukaryotic genomes. PMID:23393154
TGF-β/Smad2/3 signaling directly regulates several miRNAs in mouse ES cells and early embryos. PMID:23390484
Novel genes underlying beta cell survival in metabolic stress. PMID:23390342
Genetic variation of the natural killer gene complex has a role in lung cancer susceptibility. PMID:23372942
miR-296-3p, miR-298-5p and their downstream networks are causally involved in the higher resistance of mammalian pancreatic α cells to cytokine-induced apoptosis as compared to β cells. PMID:23360399
Polysialic acid: versatile modification of NCAM, SynCAM 1 and neuropilin-2. PMID:23354723
Chromosome X loci and spontaneous granulosa cell tumor development in SWR mice: epigenetics and epistasis at work for an ovarian phenotype. PMID:23299801
Microarray analysis identifies COMP as the most differentially regulated transcript throughout in vitro follicle growth. PMID:23242557
The BioGRID interaction database: 2013 update. PMID:23203989
Pitx1 broadly associates with limb enhancers and is enriched on hindlimb cis-regulatory elements. PMID:23201014
IPD--the Immuno Polymorphism Database. PMID:23180793
OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs. PMID:23180791
Fine map of the Gct1 spontaneous ovarian granulosa cell tumor locus. PMID:23179634
BioGPS and MyGene.info: organizing online, gene-centric information. PMID:23175613
Genenames.org: the HGNC resources in 2013. PMID:23161694
Rfam 11.0: 10 years of RNA families. PMID:23125362
Manual Gene Ontology annotation workflow at the Mouse Genome Informatics Database. PMID:23110975
IUPHAR-DB: updated database content and new features. PMID:23087376
TSGene: a web resource for tumor suppressor genes. PMID:23066107
The long path from QTL to gene. PMID:23049490
The Mammalian Phenotype Ontology as a unifying standard for experimental and high-throughput phenotyping data. PMID:22961259
The International Mouse Phenotyping Consortium: past and future perspectives on mouse phenotyping. PMID:22940749
Beyond knockouts: cre resources for conditional mutagenesis. PMID:22926223
BioGPS and GXD: mouse gene expression data-the benefits and challenges of data integration. PMID:22847375
Concept annotation in the CRAFT corpus. PMID:22776079
The App-Runx1 region is critical for birth defects and electrocardiographic dysfunctions observed in a Down syndrome mouse model. PMID:22693452
Towards an encyclopaedia of mammalian gene function: the International Mouse Phenotyping Consortium. PMID:22566555
Modifier genes and the plasticity of genetic networks in mice. PMID:22511884
Accelerating discovery for complex neurological and behavioral disorders through systems genetics and integrative genomics in the laboratory mouse. PMID:22422471
The 2012 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection. PMID:22144685
The Mouse Genome Database (MGD): premier model organism resource for mammalian genomics and genetics PubMed citations: 158.

158 articles citing: The Mouse Genome Database (MGD): premier model organism resource for mammalian genomics and genetics

Large-scale association study on daily weight gain in pigs reveals overlap of genetic factors for growth in humans. PMID:35168569
GABAA receptors in GtoPdb v.2021.3. PMID:35005623
Systems genetics in diversity outbred mice inform BMD GWAS and identify determinants of bone strength. PMID:34099702
Human myelomeningocele risk and ultra-rare deleterious variants in genes associated with cilium, WNT-signaling, ECM, cytoskeleton and cell migration. PMID:33574475
Transcriptome-wide transmission disequilibrium analysis identifies novel risk genes for autism spectrum disorder. PMID:33539344
Improving the informativeness of Mendelian disease-derived pathogenicity scores for common disease. PMID:33288751
A holistic view of mouse enhancer architectures reveals analogous pleiotropic effects and correlation with human disease. PMID:33138777
PRIM1 deficiency causes a distinctive primordial dwarfism syndrome. PMID:33060134
The regulatory genome constrains protein sequence evolution: implications for the search for disease-associated genes. PMID:32765967
Unified inference of missense variant effects and gene constraints in the human genome. PMID:32667917
Quantifying genetic effects on disease mediated by assayed gene expression levels. PMID:32424349
A Caenorhabditis elegans Model for Integrating the Functions of Neuropsychiatric Risk Genes Identifies Components Required for Normal Dendritic Morphology. PMID:32132169
Mitochondrial amidoxime-reducing component 2 (MARC2) has a significant role in N-reductive activity and energy metabolism. PMID:31554661
Genes with High Network Connectivity Are Enriched for Disease Heritability. PMID:31051114
Figure and caption extraction from biomedical documents. PMID:30949681
Prioritization of Candidate Genes for Congenital Diaphragmatic Hernia in a Critical Region on Chromosome 4p16 using a Machine-Learning Algorithm. PMID:30430034
A point mutation in the Ncr1 signal peptide impairs the development of innate lymphoid cell subsets. PMID:30288342
Exome sequencing analysis of murine medulloblastoma models identifies WDR11 as a potential tumor suppressor in Group 3 tumors. PMID:29029386
Recent advances in predicting gene-disease associations. PMID:28529714
Entropy-based divergent and convergent modular pattern reveals additive and synergistic anticerebral ischemia mechanisms. PMID:27480252
Selection on Network Dynamics Drives Differential Rates of Protein Domain Evolution. PMID:27380265
Genome-wide identification of copy number variation using high-density single-nucleotide polymorphism array in Japanese Black cattle. PMID:26809925
MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data. PMID:26653891
Next-generation diagnostics and disease-gene discovery with the Exomiser. PMID:26562621
An Orthologous Epigenetic Gene Expression Signature Derived from Differentiating Embryonic Stem Cells Identifies Regulators of Cardiogenesis. PMID:26485529
Prioritizing Clinically Relevant Copy Number Variation from Genetic Interactions and Gene Function Data. PMID:26437450
Antigen-Specific Th17 Cells Are Primed by Distinct and Complementary Dendritic Cell Subsets in Oropharyngeal Candidiasis. PMID:26431538
The digital revolution in phenotyping. PMID:26420780
Applications of comparative evolution to human disease genetics. PMID:26338499
Mouse Genome Informatics (MGI): reflecting on 25 years. PMID:26238262
Construction of biological networks from unstructured information based on a semi-automated curation workflow. PMID:26200752
Uncovering major genomic features of essential genes in Bacteria and a methanogenic Archaea. PMID:26084810
Sex differences in brain plasticity: a new hypothesis for sex ratio bias in autism. PMID:26052415
Evaluating historical candidate genes for schizophrenia. PMID:25754081
Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment. PMID:25671092
Discovery Genetics - The History and Future of Spontaneous Mutation Research. PMID:25364627
The contribution of de novo coding mutations to autism spectrum disorder. PMID:25363768
Text mining and network analysis of molecular interaction in non-small cell lung cancer by using natural language processing. PMID:25205120
A simple repeat polymorphism in the MITF-M promoter is a key regulator of white spotting in dogs. PMID:25116146
Comments on "Human dominant disease genes are enriched in paralogs originating from whole genome duplication". PMID:25077479
GWAS in a box: statistical and visual analytics of structured associations via GenAMap. PMID:24905018
Copy number variation in schizophrenia in Sweden. PMID:24776740
Linking tissues to phenotypes using gene expression profiles. PMID:24634472
Conditional knockout of CTGF affects corneal wound healing. PMID:24627144
A scoring strategy combining statistics and functional genomics supports a possible role for common polygenic variation in autism. PMID:24600472
Disruption of G-protein γ5 subtype causes embryonic lethality in mice. PMID:24599258
Differential evolutionary constraints in the evolution of chemoreceptors: a murine and human case study. PMID:24587745
Mice carrying a hypomorphic Evi1 allele are embryonic viable but exhibit severe congenital heart defects. PMID:24586749
GOLink: Finding Cooccurring Terms across Gene Ontology Namespaces. PMID:24524070
The role of de novo mutations in the genetics of autism spectrum disorders. PMID:24430941
Serotonergic neuron regulation informed by in vivo single-cell transcriptomics. PMID:24192459
Analyzing gene expression data in mice with the Neuro Behavior Ontology. PMID:24177753
Mouse model phenotypes provide information about human drug targets. PMID:24158600
Quantification of the impact of PSI:Biology according to the annotations of the determined structures. PMID:24139526
Automatically transforming pre- to post-composed phenotypes: EQ-lising HPO and MP. PMID:24131519
Fusion of large-scale genomic knowledge and frequency data computationally prioritizes variants in epilepsy. PMID:24086149
Manteia, a predictive data mining system for vertebrate genes and its applications to human genetic diseases. PMID:24038354
Global expression profiling reveals genetic programs underlying the developmental divergence between mouse and human embryogenesis. PMID:23961710
An integrative, translational approach to understanding rare and orphan genetically based diseases. PMID:23853703
PosMed: Ranking genes and bioresources based on Semantic Web Association Study. PMID:23761449
A knowledge based approach to matching human neurodegenerative disease and animal models. PMID:23717278
Molecular genetic testing and the future of clinical genomics. PMID:23681062
From mouse to human: evolutionary genomics analysis of human orthologs of essential genes. PMID:23675308
Systematic analysis of experimental phenotype data reveals gene functions. PMID:23626672
Isomer-specific LC/MS and LC/MS/MS profiling of the mouse serum N-glycome revealing a number of novel sialylated N-glycans. PMID:23534819
Multiple transcription factor binding sites predict AID targeting in non-Ig genes. PMID:23514741
STOP using just GO: a multi-ontology hypothesis generation tool for high throughput experimentation. PMID:23409969
Lower urinary tract development and disease. PMID:23408557
Importance of different types of prior knowledge in selecting genome-wide findings for follow-up. PMID:23307621
A diverse array of genetic factors contribute to the pathogenesis of systemic lupus erythematosus. PMID:23289717
Differentiating inbred mouse strains from each other and those with single gene mutations using hair proteomics. PMID:23251662
Gene family matters: expanding the HGNC resource. PMID:23245209
Semantically enabling a genome-wide association study database. PMID:23244533
ENU mutagenesis reveals that Notchless homolog 1 (Drosophila) affects Cdkn1a and several members of the Wnt pathway during murine pre-implantation development. PMID:23231322
Using genome-wide expression profiling to define gene networks relevant to the study of complex traits: from RNA integrity to network topology. PMID:23195313
Clone DB: an integrated NCBI resource for clone-associated data. PMID:23193260
The extended TILAR approach: a novel tool for dynamic modeling of the transcription factor network regulating the adaption to in vitro cultivation of murine hepatocytes. PMID:23190768
An approach for the identification of targets specific to bone metastasis using cancer genes interactome and gene ontology analysis. PMID:23166660
Phenotypic overlap in the contribution of individual genes to CNV pathogenicity revealed by cross-species computational analysis of single-gene mutations in humans, mice and zebrafish. PMID:23104991
NSort/DB: an intranuclear compartment protein database. PMID:23084778
Comparative study of human and mouse postsynaptic proteomes finds high compositional conservation and abundance differences for key synaptic proteins. PMID:23071613
Of mice and men: divergence of gene expression patterns in kidney. PMID:23056504
Towards improving phenotype representation in OWL. PMID:23046625
Quantitative comparison of mapping methods between Human and Mammalian Phenotype Ontology. PMID:23046555
Tissue-specific functional networks for prioritizing phenotype and disease genes. PMID:23028291
High throughput sequencing approaches to mutation discovery in the mouse. PMID:22991087
Transcriptional expression patterns triggered by chemically distinct neuroprotective molecules. PMID:22986168
Online tools for bioinformatics analyses in nutrition sciences. PMID:22983844
Analysis of candidate colitis genes in the Gdac1 locus of mice deficient in glutathione peroxidase-1 and -2. PMID:22970191
RhesusBase: a knowledgebase for the monkey research community. PMID:22965133
The Mammalian Phenotype Ontology as a unifying standard for experimental and high-throughput phenotyping data. PMID:22961259
Beyond knockouts: cre resources for conditional mutagenesis. PMID:22926223
Synthesizing genome-wide association studies and expression microarray reveals novel genes that act in the human growth plate to modulate height. PMID:22914739
Mapping genetic variants associated with beta-adrenergic responses in inbred mice. PMID:22859963
Assessment of community-submitted ontology annotations from a novel database-journal partnership. PMID:22859749
The genetics of alcohol dependence: advancing towards systems-based approaches. PMID:22854292
DNA and chromatin modification networks distinguish stem cell pluripotent ground states. PMID:22822199
Computational tools for comparative phenomics: the role and promise of ontologies. PMID:22814867
Improving disease gene prioritization by comparing the semantic similarity of phenotypes in mice with those of human diseases. PMID:22719993
Isolation and proteomic characterization of the mouse sperm acrosomal matrix. PMID:22707618
The genomic landscape shaped by selection on transposable elements across 18 mouse strains. PMID:22703977
Dissection of complex adult traits in a mouse synthetic population. PMID:22588897
Central nervous system endoplasmic reticulum stress in a murine model of type 2 diabetes. PMID:22581041
Genome-wide analysis of p63 binding sites identifies AP-2 factors as co-regulators of epidermal differentiation. PMID:22573176
New routes for transgenesis of the mouse. PMID:22569888
Elephant transcriptome provides insights into the evolution of eutherian placentation. PMID:22546564
Genetic architecture of body size in mammals. PMID:22546202
De novo gene disruptions in children on the autistic spectrum. PMID:22542183
Logical Gene Ontology Annotations (GOAL): exploring gene ontology annotations with OWL. PMID:22541594
Nuclear reprogramming: kinetics of cell cycle and metabolic progression as determinants of success. PMID:22530006
Modifier genes and the plasticity of genetic networks in mice. PMID:22511884
Increasing association mapping power and resolution in mouse genetic studies through the use of meta-analysis for structured populations. PMID:22505625
A molecular insight into Darwin's "plant brain hypothesis" through expression pattern study of the MKRN gene in plant embryo compared with mouse embryo. PMID:22499205
DNA methylation differences at growth related genes correlate with birth weight: a molecular signature linked to developmental origins of adult disease? PMID:22498030
A unique regulatory phase of DNA methylation in the early mammalian embryo. PMID:22456710
Transcriptome landscape of the human placenta. PMID:22448651
MEDIC: a practical disease vocabulary used at the Comparative Toxicogenomics Database. PMID:22434833
Disease model curation improvements at Mouse Genome Informatics. PMID:22434831
Mouse genetic and phenotypic resources for human genetics. PMID:22422677
An Interspecies Regulatory Network Inferred from Simultaneous RNA-seq of Candida albicans Invading Innate Immune Cells. PMID:22416242
Soybean Knowledge Base (SoyKB): a web resource for soybean translational genomics. PMID:22369646
Assessing the utility of gene co-expression stability in combination with correlation in the analysis of protein-protein interaction networks. PMID:22369639
On the Use of Gene Ontology Annotations to Assess Functional Similarity among Orthologs and Paralogs: A Short Report. PMID:22359495
MouseFinder: Candidate disease genes from mouse phenotype data. PMID:22331800
Younger genes are less likely to be essential than older genes, and duplicates are less likely to be essential than singletons of the same age. PMID:22319151
IntegromeDB: an integrated system and biological search engine. PMID:22260095
QTL/microarray approach using pathway information. PMID:22244197
CIITA promoter I CARD-deficient mice express functional MHC class II genes in myeloid and lymphoid compartments. PMID:22218223
Genome-wide association mapping of loci for antipsychotic-induced extrapyramidal symptoms in mice. PMID:22207321
Novel search method for the discovery of functional relationships. PMID:22180409
Strategies and methods to study sex differences in cardiovascular structure and function: a guide for basic scientists. PMID:22152231
AutismKB: an evidence-based knowledgebase of autism genetics. PMID:22139918
Gene set analysis of GWAS data for human longevity highlights the relevance of the insulin/IGF-1 signaling and telomere maintenance pathways. PMID:22113349
The post-apoptotic fate of RNAs identified through high-throughput sequencing of human hair. PMID:22110684
GONUTS: the Gene Ontology Normal Usage Tracking System. PMID:22110029
Mouse Phenome Database (MPD). PMID:22102583
modMine: flexible access to modENCODE data. PMID:22080565
GeneWeaver: a web-based system for integrative functional genomics. PMID:22080549
OGEE: an online gene essentiality database. PMID:22075992
The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouse. PMID:22075990
Non-hematopoietic cells in lymph nodes drive memory CD8 T cell inflation during murine cytomegalovirus infection. PMID:22046127
Exploring the elephant: histopathology in high-throughput phenotyping of mutant mice. PMID:22028326
New approaches to the representation and analysis of phenotype knowledge in human diseases and their animal models. PMID:21987712
The UCSC Genome Browser. PMID:21975940
Copy number and loss of heterozygosity detected by SNP array of formalin-fixed tissues using whole-genome amplification. PMID:21966361
BioMart as an integration solution for the International Knockout Mouse Consortium. PMID:21930503
Genetics of circadian rhythms in Mammalian model organisms. PMID:21924978
Mutation discovery in mice by whole exome sequencing. PMID:21917142
On the footsteps of Triadin and its role in skeletal muscle. PMID:21909459
Disentangling prenatal and postnatal maternal genetic effects reveals persistent prenatal effects on offspring growth in mice. PMID:21890739
Identification of CrkL-SH3 binding proteins from embryonic murine brain: implications for Reelin signaling during brain development. PMID:21879738
A transcriptomic atlas of mouse neocortical layers. PMID:21867878
Phenylbutyl isoselenocyanate modulates phase I and II enzymes and inhibits 4-(methylnitrosamino)-1-(3-pyridyl)- 1-butanone-induced DNA adducts in mice. PMID:21795424
PhenomeNET: a whole-phenome approach to disease gene discovery. PMID:21737429
Retinal proliferation response in the buphthalmic zebrafish, bugeye. PMID:21723280
The mouse genetics toolkit: revealing function and mechanism. PMID:21722353
UniProt Knowledgebase: a hub of integrated protein data. PMID:21447597
Mouse resources for craniofacial research. PMID:21309071
Mouse Genome Database (MGD)-2017: community knowledge resource for the laboratory mouse PubMed citations: 147.

147 articles citing: Mouse Genome Database (MGD)-2017: community knowledge resource for the laboratory mouse

Microinjection of Zygotes for CRISPR/Cas9-Mediated Insertion of Transgenes into the Murine Rosa26 Safe Harbor. PMID:35696031
A Bayesian factorization method to recover single-cell RNA sequencing data. PMID:35474868
Genomic changes underlying repeated niche shifts in an adaptive radiation. PMID:35398888
Mouse Model of a Human STAT4 Point Mutation That Predisposes to Disseminated Coccidiomycosis. PMID:35149520
Mice transgenic for human CTLA4-CD28 fusion gene show proliferation and transformation of ATLL-like and AITL-like T cells. PMID:35003894
Cross-species transcriptomic signatures predict response to MK2 inhibition in mouse models of chronic inflammation. PMID:34849469
Computational Interspecies Translation Between Alzheimer's Disease Mouse Models and Human Subjects Identifies Innate Immune Complement, TYROBP, and TAM Receptor Agonist Signatures, Distinct From Influences of Aging. PMID:34658769
A functional genomics pipeline identifies pleiotropy and cross-tissue effects within obesity-associated GWAS loci. PMID:34489471
Size matters: Large copy number losses in Hirschsprung disease patients reveal genes involved in enteric nervous system development. PMID:34358225
Genetic mapping of renal glutathione suggests a novel regulatory locus on the murine X chromosome and overlap with hepatic glutathione regulation. PMID:34324982
Single-Cell TCR Sequencing Reveals the Dynamics of T Cell Repertoire Profiling During Pneumocystis Infection. PMID:33959105
Downregulation of glial genes involved in synaptic function mitigates Huntington's disease pathogenesis. PMID:33871358
Transcriptome-wide association study identifies multiple genes associated with childhood body mass index. PMID:33627773
Losses of human disease-associated genes in placental mammals. PMID:33575564
Insulin's Discovery: New Insights on Its Hundredth Birthday: From Insulin Action and Clearance to Sweet Networks. PMID:33494161
An Embryonic Diapause-like Adaptation with Suppressed Myc Activity Enables Tumor Treatment Persistence. PMID:33417832
Atlas of Musculoskeletal Stem Cells with the Soft and Hard Tissue Differentiation Architecture. PMID:33304744
How to Make a Rodent Giant: Genomic Basis and Tradeoffs of Gigantism in the Capybara, the World's Largest Rodent. PMID:33169792
Role for ovarian hormones in purinoceptor-dependent natriuresis. PMID:32928299
Angioimmunoblastic T-cell lymphoma-like lymphadenopathy in mice transgenic for human RHOA with p.Gly17Val mutation. PMID:32923110
An interspecies translation model implicates integrin signaling in infliximab-resistant inflammatory bowel disease. PMID:32753478
Genomic analyses implicate noncoding de novo variants in congenital heart disease. PMID:32601476
Quantitative analysis of proteins which are members of the same protein complex but cause locus heterogeneity in disease. PMID:32591566
Evolutionary Selection and Constraint on Human Knee Chondrocyte Regulation Impacts Osteoarthritis Risk. PMID:32220312
Genome-wide Association Analysis in Humans Links Nucleotide Metabolism to Leukocyte Telomere Length. PMID:32109421
De novo variants in exomes of congenital heart disease patients identify risk genes and pathways. PMID:31941532
Dysregulation of RNA Splicing in Tauopathies. PMID:31875547
The Melanin-Concentrating Hormone (MCH) System: A Tale of Two Peptides. PMID:31849590
Formal axioms in biomedical ontologies improve analysis and interpretation of associated data. PMID:31821406
Human gene expression variability and its dependence on methylation and aging. PMID:31810449
Soft windowing application to improve analysis of high-throughput phenotyping data. PMID:31591642
Alliance of Genome Resources Portal: unified model organism research platform. PMID:31552413
Widespread cis-regulatory convergence between the extinct Tasmanian tiger and gray wolf. PMID:31533979
Proteogenomic Network Analysis of Context-Specific KRAS Signaling in Mouse-to-Human Cross-Species Translation. PMID:31521603
New insights on human essential genes based on integrated analysis and the construction of the HEGIAP web-based platform. PMID:31504171
Assessment of network module identification across complex diseases. PMID:31471613
Integrative transcriptome imputation reveals tissue-specific and shared biological mechanisms mediating susceptibility to complex traits. PMID:31444360
CAPN5 genetic inactivation phenotype supports therapeutic inhibition trials. PMID:31403230
Large-scale neuroanatomical study uncovers 198 gene associations in mouse brain morphogenesis. PMID:31371714
Genetic mapping in Diversity Outbred mice identifies a Trpa1 variant influencing late-phase formalin response. PMID:31335644
Distribution of endogenous gammaretroviruses and variants of the Fv1 restriction gene in individual mouse strains and strain subgroups. PMID:31291374
A novel missense variant in SLC18A2 causes recessive brain monoamine vesicular transport disease and absent serotonin in platelets. PMID:31240161
Exome sequencing of 20,791 cases of type 2 diabetes and 24,440 controls. PMID:31118516
Whole Genome Sequencing of Giant Schnauzer Dogs with Progressive Retinal Atrophy Establishes NECAP1 as a Novel Candidate Gene for Retinal Degeneration. PMID:31117272
MutationDistiller: user-driven identification of pathogenic DNA variants. PMID:31106342
An effective biomedical document classification scheme in support of biocuration: addressing class imbalance. PMID:31032839
Selection signatures in four German warmblood horse breeds: Tracing breeding history in the modern sport horse. PMID:31022261
Impact of Genetic Variation on CRISPR-Cas Targeting. PMID:31021199
A Bayesian framework that integrates multi-omics data and gene networks predicts risk genes from schizophrenia GWAS data. PMID:30988527
Transcriptomopathies of pre- and post-symptomatic frontotemporal dementia-like mice with TDP-43 depletion in forebrain neurons. PMID:30922385
Loss of function mutations in essential genes cause embryonic lethality in pigs. PMID:30875370
SNPs2ChIP: Latent Factors of ChIP-seq to infer functions of non-coding SNPs. PMID:30864321
Analysis of a large dataset reveals haplotypes carrying putatively recessive lethal and semi-lethal alleles with pleiotropic effects on economically important traits in beef cattle. PMID:30836944
Mouse Skull Mean Shape and Shape Robustness Rely on Different Genetic Architectures and Different Loci. PMID:30809244
Comprehensive functional annotation of susceptibility SNPs prioritized 10 genes for schizophrenia. PMID:30705251
p53 Loss in Breast Cancer Leads to Myc Activation, Increased Cell Plasticity, and Expression of a Mitotic Signature with Prognostic Value. PMID:30650356
Computational translation of genomic responses from experimental model systems to humans. PMID:30629591
BEL Commons: an environment for exploration and analysis of networks encoded in Biological Expression Language. PMID:30576488
Mouse strains and sexual divergence in corneal innervation and nerve regeneration. PMID:30561223
Following spinal cord injury, PDE4B drives an acute, local inflammatory response and a chronic, systemic response exacerbated by gut dysbiosis and endotoxemia. PMID:30557659
A quantitative framework for characterizing the evolutionary history of mammalian gene expression. PMID:30552105
Assembly of a parts list of the human mitotic cell cycle machinery. PMID:30452682
Serotonin signals through a gut-liver axis to regulate hepatic steatosis. PMID:30446669
Merkel Cells Activate Sensory Neural Pathways through Adrenergic Synapses. PMID:30415995
Phenotype loss is associated with widespread divergence of the gene regulatory landscape in evolution. PMID:30413698
Polygenic adaptation and convergent evolution on growth and cardiac genetic pathways in African and Asian rainforest hunter-gatherers. PMID:30413626
Analysis of Single-Cell RNA-Seq Identifies Cell-Cell Communication Associated with Tumor Characteristics. PMID:30404002
From De Novo to "De Nono": The Majority of Novel Protein-Coding Genes Identified with Phylostratigraphy Are Old Genes or Recent Duplicates. PMID:30346517
Multiple Pools of Nuclear Actin. PMID:30312534
Nuclear Actin: From Discovery to Function. PMID:30312531
Laboratory diagnostics of murine blood for detection of mouse cytomegalovirus (MCMV)-induced hepatitis. PMID:30287927
Intracrine Regulation of Estrogen and Other Sex Steroid Levels in Endometrium and Non-gynecological Tissues; Pathology, Physiology, and Drug Discovery. PMID:30283331
OligoPVP: Phenotype-driven analysis of individual genomic information to prioritize oligogenic disease variants. PMID:30279426
Molecular phenotyping of laboratory mouse strains using 500 multiple reaction monitoring mass spectrometry plasma assays. PMID:30271959
A rare missense variant in NR1H4 associates with lower cholesterol levels. PMID:30271901
The genomic basis of environmental adaptation in house mice. PMID:30248095
lncSLdb: a resource for long non-coding RNA subcellular localization. PMID:30219837
Epistasis regulates the developmental stability of the mouse craniofacial shape. PMID:30209292
Large-scale meta-analysis highlights the hypothalamic-pituitary-gonadal axis in the genetic regulation of menstrual cycle length. PMID:30202859
Gene regulation underlies environmental adaptation in house mice. PMID:30194096
Bioinformatics Analysis of Transcriptomic Data Reveals Refined Functional Networks for the Self-Renewal of Mouse Spermatogonial Stem Cells. PMID:30123288
Human exonization through differential nucleosome occupancy. PMID:30104384
Ancient convergent losses of Paraoxonase 1 yield potential risks for modern marine mammals. PMID:30093596
Single-cell RNA-seq uncovers dynamic processes and critical regulators in mouse spermatogenesis. PMID:30061742
Whole exome sequencing analysis in severe chronic obstructive pulmonary disease. PMID:30060175
Longitudinal Effects of Developmental Bisphenol A Exposure on Epigenome-Wide DNA Hydroxymethylation at Imprinted Loci in Mouse Blood. PMID:30044229
GOATOOLS: A Python library for Gene Ontology analyses. PMID:30022098
Bank1 and NF-kappaB as key regulators in anti-nucleolar antibody development. PMID:30016332
A promoter interaction map for cardiovascular disease genetics. PMID:29988018
Modulation of Lung Epithelial Cell Function Using Conditional and Inducible Transgenic Approaches. PMID:29987791
Experimental evidence for rapid genomic adaptation to a new niche in an adaptive radiation. PMID:29942074
Genetic Network Complexity Shapes Background-Dependent Phenotypic Expression. PMID:29903533
GNOMICS: A one-stop shop for biomedical and genomic data. PMID:29888054
An in silico proteomics screen to predict and prioritize protein-protein interactions dependent on post-translationally modified motifs. PMID:29868839
Homozygous PIGT Mutation Lead to Multiple Congenital Anomalies-Hypotonia Seizures Syndrome 3. PMID:29868109
A Review on Adducin from Functional to Pathological Mechanisms: Future Direction in Cancer. PMID:29862265
Genome-wide association meta-analysis highlights light-induced signaling as a driver for refractive error. PMID:29808027
An Osteoporosis Risk SNP at 1p36.12 Acts as an Allele-Specific Enhancer to Modulate LINC00339 Expression via Long-Range Loop Formation. PMID:29706346
Genome-wide association for testis weight in the diversity outbred mouse population. PMID:29691636
Identification of errors in the IEDB using ontologies. PMID:29688357
FAIR principles and the IEDB: short-term improvements and a long-term vision of OBO-foundry mediated machine-actionable interoperability. PMID:29688354
Different Neuronal Activity Patterns Induce Different Gene Expression Programs. PMID:29681534
A survey of functional genomic variation in domesticated chickens. PMID:29661130
Aging Mouse Models Reveal Complex Tumor-Microenvironment Interactions in Cancer Progression. PMID:29651417
A multitask clustering approach for single-cell RNA-seq analysis in Recessive Dystrophic Epidermolysis Bullosa. PMID:29630593
Homo sapiens-Specific Binding Site Variants within Brain Exclusive Enhancers Are Subject to Accelerated Divergence across Human Population. PMID:29608725
Disease Ontology: improving and unifying disease annotations across species. PMID:29590633
A genomics approach reveals insights into the importance of gene losses for mammalian adaptations. PMID:29572503
Weighted Burden Analysis of Exome-Sequenced Case-Control Sample Implicates Synaptic Genes in Schizophrenia Aetiology. PMID:29564678
Delayed male germ cell sex-specification permits transition into embryonal carcinoma cells with features of primed pluripotency. PMID:29545285
MECOM-associated syndrome: a heterogeneous inherited bone marrow failure syndrome with amegakaryocytic thrombocytopenia. PMID:29540340
An accurate and robust imputation method scImpute for single-cell RNA-seq data. PMID:29520097
Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds. PMID:29491421
A Mild PUM1 Mutation Is Associated with Adult-Onset Ataxia, whereas Haploinsufficiency Causes Developmental Delay and Seizures. PMID:29474920
Proteomic identification and characterization of hepatic glyoxalase 1 dysregulation in non-alcoholic fatty liver disease. PMID:29456458
Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus. PMID:29402210
Genetic sex determination assays in 53 mammalian species: Literature analysis and guidelines for reporting standardization. PMID:29375774
Systematic Functional Characterization of Human 21st Chromosome Orthologs in Caenorhabditis elegans. PMID:29367452
Text-based phenotypic profiles incorporating biochemical phenotypes of inborn errors of metabolism improve phenomics-based diagnosis. PMID:29340838
Evidence for convergent evolution of SINE-directed Staufen-mediated mRNA decay. PMID:29339519
Exocyst Complex Member EXOC5 Is Required for Survival of Hair Cells and Spiral Ganglion Neurons and Maintenance of Hearing. PMID:29327200
Muscle molecular adaptations to endurance exercise training are conditioned by glycogen availability: a proteomics-based analysis in the McArdle mouse model. PMID:29315579
Methods for Using Small Non-Coding RNAs to Improve Recombinant Protein Expression in Mammalian Cells. PMID:29315258
Integrated Bayesian analysis of rare exonic variants to identify risk genes for schizophrenia and neurodevelopmental disorders. PMID:29262854
Membrane Transporters for Bilirubin and Its Conjugates: A Systematic Review. PMID:29259555
Chemokine (C-C Motif) Receptor-Like 2 is not essential for lung injury, lung inflammation, or airway hyperresponsiveness induced by acute exposure to ozone. PMID:29242308
Single subject transcriptome analysis to identify functionally signed gene set or pathway activity. PMID:29218900
Integrative Bioinformatic Analysis of Transcriptomic Data Identifies Conserved Molecular Pathways Underlying Ionizing Radiation-Induced Bystander Effects (RIBE). PMID:29186820
Construction of developmental lineage relationships in the mouse mammary gland by single-cell RNA profiling. PMID:29158510
Improving Metabolic Health Through Precision Dietetics in Mice. PMID:29158425
Mouse Phenome Database: an integrative database and analysis suite for curated empirical phenotype data from laboratory mice. PMID:29136208
Mouse Genome Database (MGD)-2018: knowledgebase for the laboratory mouse. PMID:29092072
Knockdown of IARS2 suppressed growth of gastric cancer cells by regulating the phosphorylation of cell cycle-related proteins. PMID:29071539
Xenbase: a genomic, epigenomic and transcriptomic model organism database. PMID:29059324
Retinal pathology in the PPCD1 mouse. PMID:28981549
Spontaneous Development of Cutaneous Squamous Cell Carcinoma in Mice with Cell-specific Deletion of Inhibitor of κB Kinase 2. PMID:28935002
Gene expression profile data for mouse facial development. PMID:28856179
Genome-wide association study identifies novel type II diabetes risk loci in Jordan subpopulations. PMID:28828242
Implicating candidate genes at GWAS signals by leveraging topologically associating domains. PMID:28792001
HDNetDB: A Molecular Interaction Database for Network-Oriented Investigations into Huntington's Disease. PMID:28701700
Ancient selection for derived alleles at a GDF5 enhancer influencing human growth and osteoarthritis risk. PMID:28671685
Gene2Function: An Integrated Online Resource for Gene Function Discovery. PMID:28663344
Naming CRISPR alleles: endonuclease-mediated mutation nomenclature across species. PMID:28589392
Large-Scale Identification of Common Trait and Disease Variants Affecting Gene Expression. PMID:28552197
GeMSTONE: orchestrated prioritization of human germline mutations in the cloud. PMID:28521008
Chromosome 1 Sequence Analysis of C57BL/6J-Chr1KM Mouse Strain. PMID:28487860
The anatomy of phenotype ontologies: principles, properties and applications. PMID:28387809
The Mouse Genome Database: integration of and access to knowledge about the laboratory mouse PubMed citations: 133.

133 articles citing: The Mouse Genome Database: integration of and access to knowledge about the laboratory mouse

Identifying genes targeted by disease-associated non-coding SNPs with a protein knowledge graph. PMID:35830458
Comparative systeomics to elucidate physiological differences between CHO and SP2/0 cell lines. PMID:35228567
Enrichment of Newly Synthesized Proteins following treatment of C2C12 Myotubes with Endotoxin and Interferon-γ. PMID:35028803
NREM delta power and AD-relevant tauopathy are associated with shared cortical gene networks. PMID:33833255
Transcriptome-wide association study reveals two genes that influence mismatch negativity. PMID:33730571
Integrative Analysis Identified Key Schizophrenia Risk Factors from an Abnormal Behavior Mouse Gene Set. PMID:33672431
Heparan Sulfate Biosynthesis in Zebrafish. PMID:33216642
Bio-activating ultrafine grain titanium: RNA sequencing reveals enhanced mechano-activation of osteoconduction on nanostructured substrates. PMID:32970688
Polygenic risk for schizophrenia and subcortical brain anatomy in the UK Biobank cohort. PMID:32908133
The role of copy-number variation in the reinforcement of sexual isolation between the two European subspecies of the house mouse. PMID:32654648
Systems Analysis Implicates WAVE2 Complex in the Pathogenesis of Developmental Left-Sided Obstructive Heart Defects. PMID:32368696
TarGo: network based target gene selection system for human disease related mouse models. PMID:32257911
Novel Approaches for Identifying the Molecular Background of Schizophrenia. PMID:31963710
A transcriptome-wide association study implicates specific pre- and post-synaptic abnormalities in schizophrenia. PMID:31691811
Reproducibility of CRISPR-Cas9 methods for generation of conditional mouse alleles: a multi-center evaluation. PMID:31446895
RNA-seq reveals outcome-specific gene expression of MMP7 and PCK1 in biliary atresia. PMID:31342296
Identification of an early cell fate regulator by detecting dynamics in transcriptional heterogeneity and co-regulation during astrocyte differentiation. PMID:31098297
Expanding the neurodevelopmental phenotypes of individuals with de novo KMT2A variants. PMID:31044088
Multi-ancestry genome-wide gene-smoking interaction study of 387,272 individuals identifies new loci associated with serum lipids. PMID:30926973
Genetic variants differentially associated with rheumatoid arthritis and systemic lupus erythematosus reveal the disease-specific biology. PMID:30804378
A gene expression signature in developing Purkinje cells predicts autism and intellectual disability co-morbidity status. PMID:30679692
Semantic Disease Gene Embeddings (SmuDGE): phenotype-based disease gene prioritization without phenotypes. PMID:30423077
Transcriptional Heterogeneity of Cryptococcus gattii VGII Compared with Non-VGII Lineages Underpins Key Pathogenicity Pathways. PMID:30355668
Common schizophrenia alleles are enriched in mutation-intolerant genes and in regions under strong background selection. PMID:29483656
Mechanisms of action of Coxiella burnetii effectors inferred from host-pathogen protein interactions. PMID:29176882
The Mouse Tumor Biology Database: A Comprehensive Resource for Mouse Models of Human Cancer. PMID:29092943
Whole exome sequencing in 342 congenital cardiac left sided lesion cases reveals extensive genetic heterogeneity and complex inheritance patterns. PMID:29089047
Diverse type 2 diabetes genetic risk factors functionally converge in a phenotype-focused gene network. PMID:29059180
Transcriptional memory of cells of origin overrides β-catenin requirement of MLL cancer stem cells. PMID:28978671
Sequence analysis of chromosome 1 revealed different selection patterns between Chinese wild mice and laboratory strains. PMID:28631230
Muscle-relevant genes marked by stable H3K4me2/3 profiles and enriched MyoD binding during myogenic differentiation. PMID:28609469
Genetic association study of exfoliation syndrome identifies a protective rare variant at LOXL1 and five new susceptibility loci. PMID:28553957
Diverse application of MRI for mouse phenotyping. PMID:28544650
1000 Genomes-based meta-analysis identifies 10 novel loci for kidney function. PMID:28452372
Gene ORGANizer: linking genes to the organs they affect. PMID:28444223
MYC-driven inhibition of the glutamate-cysteine ligase promotes glutathione depletion in liver cancer. PMID:28219903
Functional Genomics Identifies Tis21-Dependent Mechanisms and Putative Cancer Drug Targets Underlying Medulloblastoma Shh-Type Development. PMID:27965576
The genetic basis and fitness consequences of sperm midpiece size in deer mice. PMID:27910854
Mouse Genome Database (MGD)-2017: community knowledge resource for the laboratory mouse. PMID:27899570
CardioTF, a database of deconstructing transcriptional circuits in the heart system. PMID:27635320
Techniques and Approaches to Genetic Analyses in Nephrological Disorders. PMID:27617137
The Role of Retrotransposons in Gene Family Expansions in the Human and Mouse Genomes. PMID:27503295
Systems Genetic Analyses Highlight a TGFβ-FOXO3 Dependent Striatal Astrocyte Network Conserved across Species and Associated with Stress, Sleep, and Huntington's Disease. PMID:27390852
The harmonizome: a collection of processed datasets gathered to serve and mine knowledge about genes and proteins. PMID:27374120
Identification of SLC41A3 as a novel player in magnesium homeostasis. PMID:27349617
A catalog of hemizygous variation in 127 22q11 deletion patients. PMID:27274857
Defining the identity of mouse embryonic dermal fibroblasts. PMID:27265328
An Integrated Data Driven Approach to Drug Repositioning Using Gene-Disease Associations. PMID:27196054
Capturing phenotypes for precision medicine. PMID:27148566
Dominant Splice Site Mutations in PIK3R1 Cause Hyper IgM Syndrome, Lymphadenopathy and Short Stature. PMID:27076228
Genome-Wide Association Study to Identify Genes Related to Renal Mercury Concentrations in Mice. PMID:26942574
A dominant gain-of-function mutation in universal tyrosine kinase SRC causes thrombocytopenia, myelofibrosis, bleeding, and bone pathologies. PMID:26936507
Phenotype Similarity Regression for Identifying the Genetic Determinants of Rare Diseases. PMID:26924528
Integrative subcellular proteomic analysis allows accurate prediction of human disease-causing genes. PMID:26912414
The effect of non-coding DNA variations on P53 and cMYC competitive inhibition at cis-overlapping motifs. PMID:26908612
Weak Epistasis Generally Stabilizes Phenotypes in a Mouse Intercross. PMID:26828925
Comprehensive analysis of schizophrenia-associated loci highlights ion channel pathways and biologically plausible candidate causal genes. PMID:26755824
Using host-pathogen protein interactions to identify and characterize Francisella tularensis virulence factors. PMID:26714771
A large genome-wide association study of age-related macular degeneration highlights contributions of rare and common variants. PMID:26691988
Exome Sequencing Identifies Pathogenic and Modifier Mutations in a Child With Sporadic Dilated Cardiomyopathy. PMID:26656454
Identifying Novel Transcriptional Regulators with Circadian Expression. PMID:26644408
Genetic architecture of early pre-inflammatory stage transcription signatures of autoimmune diabetes in the pancreatic lymph nodes of the NOD mouse reveals significant gene enrichment on chromosomes 6 and 7. PMID:26629415
Towards a compendium of essential genes - From model organisms to synthetic lethality in cancer cells. PMID:26627871
SINCERA: A Pipeline for Single-Cell RNA-Seq Profiling Analysis. PMID:26600239
Differential variability and correlation of gene expression identifies key genes involved in neuronal differentiation. PMID:26586157
Mouse genome database 2016. PMID:26578600
MouseNet v2: a database of gene networks for studying the laboratory mouse and eight other model vertebrates. PMID:26527726
Multiple SNP Set Analysis for Genome-Wide Association Studies Through Bayesian Latent Variable Selection. PMID:26515609
The folate-coupled enzyme MTHFD2 is a nuclear protein and promotes cell proliferation. PMID:26461067
Strong selection for behavioural resilience in Australian stock working dogs identified by selective sweep analysis. PMID:26401334
RNASeqMetaDB: a database and web server for navigating metadata of publicly available mouse RNA-Seq datasets. PMID:26323714
Transcriptional maturation of the mouse auditory forebrain. PMID:26271746
Use of model organism and disease databases to support matchmaking for human disease gene discovery. PMID:26269093
Incorporating Functional Information in Tests of Excess De Novo Mutational Load. PMID:26235986
Orthology for comparative genomics in the mouse genome database. PMID:26223881
Analysis of mammalian gene function through broad-based phenotypic screens across a consortium of mouse clinics. PMID:26214591
SHIELD: an integrative gene expression database for inner ear research. PMID:26209310
Regulator of G-protein signaling 2 (RGS2) suppresses premature calcium release in mouse eggs. PMID:26160904
Galectin-3 Binding Protein Secreted by Breast Cancer Cells Inhibits Monocyte-Derived Fibrocyte Differentiation. PMID:26136428
Tissue-Specific Evolution of Protein Coding Genes in Human and Mouse. PMID:26121354
Publisher’s Note:Abstraction for data integration:Fusing mammalian molecular, cellular and phenotype big datasets for better knowledge extraction. PMID:26101093
Revealing Pathway Dynamics in Heart Diseases by Analyzing Multiple Differential Networks. PMID:26083688
Tissue-Specific Regulation of Oncogene Expression Using Cre-Inducible ROSA26 Knock-In Transgenic Mice. PMID:26069083
Analysis of the human diseasome using phenotype similarity between common, genetic, and infectious diseases. PMID:26051359
Novel Findings from CNVs Implicate Inhibitory and Excitatory Signaling Complexes in Schizophrenia. PMID:26050040
DeAnnCNV: a tool for online detection and annotation of copy number variations from whole-exome sequencing data. PMID:26013811
Label-Free Protein-RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression. PMID:25993413
PsyGeNET: a knowledge platform on psychiatric disorders and their genes. PMID:25964630
A systems approach identifies networks and genes linking sleep and stress: implications for neuropsychiatric disorders. PMID:25921536
Toll-like receptor signaling in vertebrates: testing the integration of protein, complex, and pathway data in the protein ontology framework. PMID:25894391
DisGeNET: a discovery platform for the dynamical exploration of human diseases and their genes. PMID:25877637
Genome-wide Analysis of Body Proportion Classifies Height-Associated Variants by Mechanism of Action and Implicates Genes Important for Skeletal Development. PMID:25865494
Biochemical functional predictions for protein structures of unknown or uncertain function. PMID:25848497
Conservation of pro-longevity genes among mammals. PMID:25804384
Performance of case-control rare copy number variation annotation in classification of autism. PMID:25783485
Nonviral Reprogramming of Human Wharton's Jelly Cells Reveals Differences Between ATOH1 Homologues. PMID:25760435
Immunogenetics. Dynamic profiling of the protein life cycle in response to pathogens. PMID:25745177
Web resources for model organism studies. PMID:25707592
PEAT: an intelligent and efficient paired-end sequencing adapter trimming algorithm. PMID:25707528
PTEN regulates natural killer cell trafficking in vivo. PMID:25646418
Whole-genome sequencing of quartet families with autism spectrum disorder. PMID:25621899
Chromatin decompaction by the nucleosomal binding protein HMGN5 impairs nuclear sturdiness. PMID:25609380
Reconstructing genome-wide protein-protein interaction networks using multiple strategies with homologous mapping. PMID:25602759
Biological interpretation of genome-wide association studies using predicted gene functions. PMID:25597830
Whole-exome sequencing in undiagnosed genetic diseases: interpreting 119 trios. PMID:25590979
Inhibitor of differentiation 4 (ID4): From development to cancer. PMID:25512197
Methodology for the inference of gene function from phenotype data. PMID:25495798
Homozygous and compound-heterozygous mutations in TGDS cause Catel-Manzke syndrome. PMID:25480037
Gene expression profiling studies in regenerating nerves in a mouse model for CMT1X: uninjured Cx32-knockout peripheral nerves display expression profile of injured wild type nerves. PMID:25447941
The BioGRID interaction database: 2015 update. PMID:25428363
OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software. PMID:25428351
INFRAFRONTIER--providing mutant mouse resources as research tools for the international scientific community. PMID:25414328
Beyond protein expression, MOPED goes multi-omics. PMID:25404128
Diversity Outbred Mice Identify Population-Based Exposure Thresholds and Genetic Factors that Influence Benzene-Induced Genotoxicity. PMID:25376053
Genenames.org: the HGNC resources in 2015. PMID:25361968
The Mouse Genome Database (MGD): facilitating mouse as a model for human biology and disease. PMID:25348401
Hybrid mice reveal parent-of-origin and Cis- and trans-regulatory effects in the retina. PMID:25340786
Mouse Tumor Biology (MTB): a database of mouse models for human cancer. PMID:25332399
EpilepsyGene: a genetic resource for genes and mutations related to epilepsy. PMID:25324312
Systematic analysis of the phosphoproteome and kinase-substrate networks in the mouse testis. PMID:25293948
Clinical interpretation of CNVs with cross-species phenotype data. PMID:25280750
Mouse ENU Mutagenesis to Understand Immunity to Infection: Methods, Selected Examples, and Perspectives. PMID:25268389
De novo mutations in synaptic transmission genes including DNM1 cause epileptic encephalopathies. PMID:25262651
Genetic dissection of the ity3 locus identifies a role for ncf2 co-expression modules and suggests selp as a candidate gene underlying the ity3.2 locus. PMID:25161653
Lean Big Data integration in systems biology and systems pharmacology. PMID:25109570
Differential hippocampal gene expression and pathway analysis in an etiology-based mouse model of major depressive disorder. PMID:25059218
The gene expression database for mouse development (GXD): putting developmental expression information at your fingertips. PMID:24958384
PubServer: literature searches by homology. PMID:24957597
Representing kidney development using the gene ontology. PMID:24941002
StemCellNet: an interactive platform for network-oriented investigations in stem cell biology. PMID:24852251
BioCreative-IV virtual issue. PMID:24852177
Commentary on Shimoyama et al. (2012): three ontologies to define phenotype measurement data. PMID:24795755
Cognition and hippocampal plasticity in the mouse is altered by monosomy of a genomic region implicated in Down syndrome. PMID:24752061