Tag: data management


Found 40 sources
Source Match ReputationScore*

modMine


modMine is an integrated web resource of data and tools to browse and search modENCODE data and experimental details, download results and access the GBrowse genome browser.
100%

RxNORM


RxNorm provides normalized names for clinical drugs and links its names to many of the drug vocabularies commonly used in pharmacy management and drug interaction software, including those of First Databank, Micromedex, MediSpan, Gold Standard Drug D ...
78%

FlyMine


FlyMine is an integrated database of genomic, expression and protein data for Drosophila, Anopheles and C. elegans. Integrating data makes it possible to run sophisticated data mining queries that span domains of biological knowledge.
78%

YeastMine


Search and retrieve S. cerevisiae data with YeastMine, populated by SGD and powered by InterMine.
67%

ThaleMine


ThaleMine enables you to analyze Arabidopsis thaliana genes, proteins, gene expression, protein-protein interactions, orthologs, and more. Use plain text or structured queries for interactive gene and protein reports.
64%

Golm Metabolome Database


The Golm Metabolome Database (GMD) provides gas chromatography (GC) mass spectrometry (MS) reference spectra, reference metabolite profiles and tools for one of the most widespread routine technologies applied to the large scale screening and discove ...
64%

HymenopteraMine


HymenopteraMine integrates genomic data for bees, ants and the parasitoid jewel wasp. Expression and variation data are provided for A. mellifera.
62%

PlanMine


PlanMine is an integrated web resource of data & tools to mine Planarian biology.
61%

ZebrafishMine


ZebrafishMine is a tool to customize searches of Zebrafish-related biological data including genes, proteins, fish, and reagents
61%

BovineMine


BovineMine integrates the bovine reference genome assembly with many other biological data sets, including genomes of other species. The sheep and goat genomes allow comparison across ruminants. Model organism data (human, mouse, rat) allow well-cura ...
61%

CHOmine


CHOmine integrates many types of data for Cricetulus griseus, and CHO cells. You can run flexible queries, export results and analyse lists of data.
58%

Hemolytik


A Database of Hemolytic and Non-hemolytic Peptides
56%

Clusteval


Free and extendable opensource platform for objective performance comparison of arbitrary Clustering Methods on different datasets.
54%

RepetDB


RepetDB provides repeat consensus detected and classified by TEdenovo and used by TEannot to annotate copies in genomes.
54%

PhytoMine


An InterMine interface to data from Phytozome
54%

HumanMine


HumanMine integrates many types of data for Homo sapiens and Mus musculus. You can run flexible queries, export results and analyse lists of data.
54%

XenMine


XenMine has been created to view, search and analyze Xenopus data, and provides essential information on gene expression changes and regulatory elements present in the genome. It contains published genomic datasets from both Xenopus tropicalis and Xe ...
54%

GrapeMine


GrapeMine is dedicated to grapevine data. It provides access to many kind of data types like genomic annotation data as well as SNPs, markers and phenotyping data.
49%

BeanMine


This mine integrates many types of data for string bean built from the LIS chado database.
49%

PeanutMine


PeanutMine integrates peanut data from LIS PeanutBase and other sources.
49%

MedicMine


MedicMine integrates many types of data for Medicago truncatula. You can run flexible queries, export results and analyse lists of genes.
49%

CowpeaMine


CowpeaMine integrates genomic and genetic data for cowpea, Vigna unguiculata. It is built from the LIS tripal.chado database as well as data from publications.
49%

SoyMine


This mine integrates many types of data for soybean. It is currently under development by LIS, built from the LIS chado database (genomic data) and the SoyBase database (genetic data) as well as other resources
49%

LegumeMine


This mine integrates data for multiple legume species. It is under development by NCGR and is built from the LIS and PeanutBase chado databases as well as exports from other sources.
49%

WheatMine


WheatMine integrates many types of data for Triticum aestivum including gene model, markers, and scaffolds. You can run flexible queries, export results and analyse lists of data.
49%

WormMine


WormMine integrates many types of data for C. elegans and related nematodes. You can run flexible queries, export results and analyse lists of data.
49%

ChickpeaMine


ChickpeaMine integrates data for chickpea varieties desi and kabuli. It is developed by LIS/NCGR, built from the LIS chado database and the Chickpea Transcriptome Atlas - I.
49%

ChemSpider


ChemSpider is a freely available collection of compound data from across the web, which aggregates chemical structures and their associated information into a single searchable repository entry. These entries are supplemented with additional properti ...
49%

RatMine


RatMine integrates many types of data for Rattus Norvegicus, Homo Sapiens, Mus Musculus and other organisms. You can run flexible queries, export results and analyse lists of data.
49%

PANGAEA - Data Publisher for Earth and Environmental Science


The information system PANGAEA is operated as an Open Access library aimed at archiving, publishing and distributing georeferenced data from earth system research. PANGAEA is a member of the ICSU World Data System (WDS).
49%

RaMP


A Comprehensive Relational Database of Metabolomics Pathways for Pathway Enrichment Analysis of Genes and Metabolites.
49%

PAGER


Pathway, Annotated-list, and Gene-signature Electronic Repository.
48%

RAEdb


Database of enhancers identified by high-throughput reporter assays.
47%

PathBase


European mutant mice pathology database: histopathology photomicrographs and macroscopic images
44%

OakMine


Quercus robur annotation database
41%

dBBQs


The database of bacterial quality scores.
41%

MaizeMine


An integrated data warehouse for MaizeGDB
41%

LocustMine


An integrated Omics data warehouse for Locust, Locusta migratoria
41%

miRMaid


Intuitive and modular software platform designed to unify miRBase and independent miRNA data resources. It enables miRNA researchers to computationally address complex questions involving the multitude of miRNA data resources.
41%

DiversityExsiccatae


DiversityExsiccatae (DWB-DE) is an application of Diversity Workbench (DWB). It might be installed as part of a DWB environment, but also as a stand-alone application, e. g., in a local installation. Each DWB module is devoted to a specific data doma ...
41%

*ReputationScore indicates how established a given datasource is. Find out more.




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