XenMine
XenMine has been created to view, search and analyze Xenopus data, and provides essential information on gene expression changes and regulatory elements present in the genome. It contains published genomic datasets from both Xenopus tropicalis and Xenopus laevis.
Description
More detailed information about this field from each metasource.
XenMine has been created to view, search and analyze Xenopus data, and provides essential information on gene expression changes and regulatory elements present in the genome. It contains published genomic datasets from both Xenopus tropicalis and Xenopus laevis.
metasource: Fairsharing.orgversion: FAIRsharing.org: XenMine; XenMine; DOI: https://doi.org/10.25504/FAIRsharing.iHhPe9; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
Search and retrieve integrated Xenopus tropicalis and Xenopus laevis data
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:31:21.860396
Webpage:
http://www.xenmine.org/xenmineWebpage
More detailed information about this field from each metasource.
http://www.xenmine.org/xenmine
metasource: Fairsharing.orgversion: FAIRsharing.org: XenMine; XenMine; DOI: https://doi.org/10.25504/FAIRsharing.iHhPe9; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:31:21.860396
Licence:
Name: LGPL-2.1Licence name
More detailed information about this field from each metasource.
Publications:
Publications
More detailed information about this field from each metasource.
XenMine: A genomic interaction tool for the Xenopus community
PMID: 27157655
metasource: Fairsharing.org
version: FAIRsharing.org: XenMine; XenMine; DOI: https://doi.org/10.25504/FAIRsharing.iHhPe9; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
http://dx.doi.org/10.1093/bioinformatics/bts577
metasource: bio.tools
version: extracted_at: 2022-11-04T11:31:21.860396
Publications
More detailed information about this field from each metasource.
XenMine: A genomic interaction tool for the Xenopus community
PMID: 27157655
metasource: Fairsharing.org
version: FAIRsharing.org: XenMine; XenMine; DOI: https://doi.org/10.25504/FAIRsharing.iHhPe9; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
http://dx.doi.org/10.1093/bioinformatics/bts577
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:31:21.860396
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XenMine: A genomic interaction tool for the Xenopus community
PubMed citations: 3.
3 articles citing: XenMine: A genomic interaction tool for the Xenopus community
Uncovering the mesendoderm gene regulatory network through multi-omic data integration. PMID:35172134
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. PMID:30239679
Xenbase: a genomic, epigenomic and transcriptomic model organism database. PMID:29059324 - http://dx.doi.org/10.1093/bioinformatics/bts577
Tags:
Tags
More detailed information about this field from each metasource.
chromatin immunoprecipitation - dna sequencing
metasource: Fairsharing.org
version: FAIRsharing.org: XenMine; XenMine; DOI: https://doi.org/10.25504/FAIRsharing.iHhPe9; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
dna sequence data
metasource: Fairsharing.org
version: FAIRsharing.org: XenMine; XenMine; DOI: https://doi.org/10.25504/FAIRsharing.iHhPe9; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
gene
metasource: Fairsharing.org
version: FAIRsharing.org: XenMine; XenMine; DOI: https://doi.org/10.25504/FAIRsharing.iHhPe9; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
rna sequencing
metasource: Fairsharing.org
version: FAIRsharing.org: XenMine; XenMine; DOI: https://doi.org/10.25504/FAIRsharing.iHhPe9; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
data management
metasource: bio.tools
version: extracted_at: 2022-11-04T11:31:21.860396
genomics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:31:21.860396
proteomics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:31:21.860396
Tags
More detailed information about this field from each metasource.
chromatin immunoprecipitation - dna sequencing
metasource: Fairsharing.orgversion: FAIRsharing.org: XenMine; XenMine; DOI: https://doi.org/10.25504/FAIRsharing.iHhPe9; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
dna sequence data
metasource: Fairsharing.orgversion: FAIRsharing.org: XenMine; XenMine; DOI: https://doi.org/10.25504/FAIRsharing.iHhPe9; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
gene
metasource: Fairsharing.orgversion: FAIRsharing.org: XenMine; XenMine; DOI: https://doi.org/10.25504/FAIRsharing.iHhPe9; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
rna sequencing
metasource: Fairsharing.orgversion: FAIRsharing.org: XenMine; XenMine; DOI: https://doi.org/10.25504/FAIRsharing.iHhPe9; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
data management
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:31:21.860396
genomics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:31:21.860396
proteomics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:31:21.860396
chromatin immunoprecipitation - dna sequencing dna sequences gene rna sequence data management genomics proteomics
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