MAC-INMV-SSR
A web application dedicated to genotyping members of Mycobacterium avium complex (MAC) including Mycobacterium avium subsp. paratuberculosis strains. Genotyping of Mycobacterium avium subsp. paratuberculosis (Map) is an indispensable tool for surveillance of this significant veterinary pathogen. For Map, multi-locus variable number tandem repeat analysis (MLVA) targeting mycobacterial interspersed repetitive units (MIRUs) and other variable number variable-number tandem repeats (VNTRs) was established using 8 markers. In the recent past this standard, portable, reproducible and discriminatory typing method has been frequently applied alone or in combinations with multi-locus short-sequence-repeat (MLSSR) sequencing. With the widespread use of these genotyping methods, standardization between laboratories needs to be managed, and knowledge of existing profiles and newly defined genotypes should be indexed and shared.
Description
More detailed information about this field from each metasource.
A web application dedicated to genotyping members of Mycobacterium avium complex (MAC) including Mycobacterium avium subsp. paratuberculosis strains. Genotyping of Mycobacterium avium subsp. paratuberculosis (Map) is an indispensable tool for surveillance of this significant veterinary pathogen. For Map, multi-locus variable number tandem repeat analysis (MLVA) targeting mycobacterial interspersed repetitive units (MIRUs) and other variable number variable-number tandem repeats (VNTRs) was established using 8 markers. In the recent past this standard, portable, reproducible and discriminatory typing method has been frequently applied alone or in combinations with multi-locus short-sequence-repeat (MLSSR) sequencing. With the widespread use of these genotyping methods, standardization between laboratories needs to be managed, and knowledge of existing profiles and newly defined genotypes should be indexed and shared.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:29:28.928549
Webpage:
http://mac-inmv.tours.inra.fr/0_macinmv/Webpage
More detailed information about this field from each metasource.
http://mac-inmv.tours.inra.fr/0_macinmv/
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:29:28.928549
Publications:
Publications
More detailed information about this field from each metasource.
MAC-INMV-SSR: a web application dedicated to genotyping members of Mycobacterium avium complex (MAC) including Mycobacterium avium subsp. paratuberculosis strains
PMID: 31634642
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:28.928549
Publications
More detailed information about this field from each metasource.
MAC-INMV-SSR: a web application dedicated to genotyping members of Mycobacterium avium complex (MAC) including Mycobacterium avium subsp. paratuberculosis strains
PMID: 31634642
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:28.928549
-
MAC-INMV-SSR: a web application dedicated to genotyping members of Mycobacterium avium complex (MAC) including Mycobacterium avium subsp. paratuberculosis strains
PubMed citations: 3.
3 articles citing: MAC-INMV-SSR: a web application dedicated to genotyping members of Mycobacterium avium complex (MAC) including Mycobacterium avium subsp. paratuberculosis strains
Whole-Genome Analysis of Mycobacterium avium subsp. paratuberculosis IS900 Insertions Reveals Strain Type-Specific Modalities. PMID:34040595
Isolation, Molecular Typing, and Antibiotic Susceptibility Testing of Mycobacterium avium Subspecies hominissuis From a Dog With Generalized Mycobacteriosis. PMID:33330691
Genetic Diversity Among Mycobacterium avium Subspecies Revealed by Analysis of Complete Genome Sequences. PMID:32849358
Tags:
Tags
More detailed information about this field from each metasource.
dna polymorphism
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:28.928549
genotype and phenotype
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:28.928549
database management
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:28.928549
Tags
More detailed information about this field from each metasource.
dna polymorphism
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:29:28.928549
genotype and phenotype
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:29:28.928549
database management
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:29:28.928549
dna polymorphism genotype and phenotype data management
Need help integrating and/or managing biomedical data?