PhytoMine
An InterMine interface to data from Phytozome
Description
More detailed information about this field from each metasource.
An InterMine interface to data from Phytozome
metasource: Fairsharing.orgversion: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
An InterMine interface to data from Phytozome, the Plant Comparative Genomics portal of the Department of Energy's Joint Genome Institute, which hosts 81 assembled and annotation genomes, from 78 viridiplantae species.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:31:21.860396
Webpage:
https://phytozome.jgi.doe.gov/phytomine/Webpage
More detailed information about this field from each metasource.
https://phytozome.jgi.doe.gov/phytomine/
metasource: Fairsharing.orgversion: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:31:21.860396
Licence:
Name: LGPL-2.1Licence name
More detailed information about this field from each metasource.
Publications:
Publications
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http://dx.doi.org/10.1093/bioinformatics/bts577
metasource: bio.tools
version: extracted_at: 2022-11-04T11:31:21.860396
Publications
More detailed information about this field from each metasource.
http://dx.doi.org/10.1093/bioinformatics/bts577
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:31:21.860396
Tags:
Tags
More detailed information about this field from each metasource.
gene expression
metasource: Fairsharing.org
version: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
gene expression data
metasource: Fairsharing.org
version: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
orthologous
metasource: Fairsharing.org
version: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
paralogous
metasource: Fairsharing.org
version: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
protein
metasource: Fairsharing.org
version: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
transcript
metasource: Fairsharing.org
version: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
polypeptide_region
metasource: Fairsharing.org
version: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
data management
metasource: bio.tools
version: extracted_at: 2022-11-04T11:31:21.860396
genomics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:31:21.860396
proteomics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:31:21.860396
Tags
More detailed information about this field from each metasource.
gene expression
metasource: Fairsharing.orgversion: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
gene expression data
metasource: Fairsharing.orgversion: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
orthologous
metasource: Fairsharing.orgversion: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
paralogous
metasource: Fairsharing.orgversion: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
protein
metasource: Fairsharing.orgversion: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
transcript
metasource: Fairsharing.orgversion: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
polypeptide_region
metasource: Fairsharing.orgversion: FAIRsharing.org: PhytoMine; PhytoMine; DOI: https://doi.org/10.25504/FAIRsharing.w7Yuyx; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:09 p.m.
data management
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:31:21.860396
genomics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:31:21.860396
proteomics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:31:21.860396
gene expression gene expression orthology paralogous protein transcript polypeptide region data management genomics proteomics
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