Tag: cell biology


Found 45 sources
Source Match ReputationScore*

Human Protein Atlas


The Human Protein Atlas is program started with the aim to map of all the human proteins in cells, tissues and organs using integration of various omics technologies. It consists of three parts: Tissue Atlas showing the distribution of proteins acros ...
100%

Database of Protein Disorder


The Database of Protein Disorder (DisProt) is a curated database that provides information about proteins that lack fixed 3D structure in their putatively native states, either in their entirety or in part.
61%

ExoCarta


A database of exosomes, membrane vesicles of endocytic origin released by diverse cell types.
56%

Cellosaurus


The Cellosaurus is a knowledge resource on cell lines. It attempts to describe all cell lines used in biomedical research. Its scope includes: Immortalized cell lines; naturally immortal cell lines (example: stem cell lines); finite life cell lines w ...
51%

BioNumbers


Useful biological numbers
48%

Agile Protein Interactomes Dataserver


APID Interactomes (Agile Protein Interactomes DataServer) provides information on the protein interactomes of numerous organisms, based on the integration of known experimentally validated protein-protein physical interactions (PPIs). The interactome ...
45%

Ascidian Network for In Situ Expression and Embryological Data


Aniseed is a database designed to offer a representation of ascidian embryonic development at the level of the genome (cis-regulatory sequences, spatial gene expression, protein annotation), of the cell (cell shapes, fate, lineage) or of the whole em ...
45%

Human Histone Database


HIstome (Human histone database) is a freely available, specialist, electronic database dedicated to display information about human histone variants, sites of their post-translational modifications and about various histone modifying enzymes.
45%

MitoFish


Mitochondrial genome database of fish with an accurate and automatic annotation pipeline.
43%

PathBank


PathBank is an interactive, visual database containing more than 100 000 machine-readable pathways found in model organisms such as humans, mice, E. coli, yeast, and Arabidopsis thaliana. The majority of these pathways are not found in any other path ...
42%

MERAV


Metabolic gEne RApid Visualizer
41%

American Type Culture Collection database


ATCC authenticates microorganisms and cell lines and manages logistics of long-term preservation and distribution of cultures for the scientific community. ATCC supports the cultures it acquires and authenticates with expert technical support, intell ...
40%

Genome Biology Ontology Language


To enable interoperability of genome annotations, we have developed the Genome Biology Ontology Language (GBOL) and associated stack (GBOL stack). GBOL is provenance centered and provides a consistent representation of genome derived automated predic ...
40%

The mitochondrial DNA breakpoints database


A comprehensive on-line resource with curated datasets of mitochondrial DNA (mtDNA) rearrangements.
40%

Human Pluripotent Stem Cell Registry


The human pluripotent stem cell registry (hPSCreg) is a public registry and data portal for human embryonic and induced pluripotent stem cell lines (hESC and hiPSC). The Registry provides comprehensive and standardized biological and legal informatio ...
40%

A database for spatially resolved transcriptomes


Spatially resolved transcriptomics providing gene expression profiles with positional information is key to tissue function and fundamental to disease pathology. SpatialDB is the first public database that specifically curates spatially resolved tran ...
39%

Recode


Recode2 is a database of genes that utilize non-standard translation for gene expression purposes. Recoding events described in the database include programmed ribosomal frameshifting, translational bypassing (aka hopping) and mRNA specific codon red ...
39%

ADPriboDB


ADP-ribosylated proteins and sites
38%

PhaSePro


Membraneless organelles (MOs) are dynamic liquid condensates that host a variety of specific cellular processes, such as ribosome biogenesis or RNA degradation. MOs form through liquid–liquid phase separation (LLPS), a process that relies on multiv ...
37%

DNAtraffic


A database for systems biology of DNA dynamics during the cell life.
37%

EnhancerAtlas


An updated resource with enhancer annotation in 586 tissue/cell types across nine species. an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species.
35%

EndoDB


a database of endothelial cell transcriptomics data. EndoDB The endothelial cell database (EndoDB) is a freely accessible added-value database that facilitates bench scientists to unlock the untapped potential of publicly available (single cell) tra ...
35%

snoDB


an interactive database of human snoRNA sequences, abundance and interactions. Tool to visualize expression data in heatmaps. Column Options Reset Filters Refresh Table. snoTHAW is a tool to help visualize snoRNA expression data from snoDB
35%

GlycoPOST


Raw Mass Spectrometry glycomics data
34%

NCBI Bookshelf


Searchable collection of biomedical books linked to terms in PubMed abstracts; when viewing an abstract, click on Books link to see phrases in abstract hyperlinked to book sections.
34%

PhaSepDB


PhaSepDB is a novel database that provides a collection of phase separation related proteins manually curated from publications and public database. In addition to curated proteins, PhaSepDB also provides the researchers with molecular signatures th ...
34%

DrLLPS


A data resource of liquid-liquid phase separation in eukaryotes. Here, we presented a data resource of LLPS (DrLLPS), a comprehensive data resource that contained 437,887 known and computationally detected LLPS-associated proteins in 164 eukaryotic ...
33%

PlanExp


PlanExp is an intuitive integration of complex RNA-seq datasets with planarian omics resources.
33%

SCDevDB


A Database for Insights Into Single-Cell Gene Expression Profiles During Human Developmental Processes. PRESDB:pig RNA Editing database
32%

SCLD


User-editable lineage maps illustrating both endogenous development and the directed differentiation of human and mouse embryonic stem cells.
32%

HmtVar


A data and text mining pipeline to annotate human mitochondrial variants with functional and clinical information. The main web resource to explore human mitochondrial variability data and their pathological correlation. HmtVar is a manually-curate ...
32%

The Cell Image Library


This library is a public and easily accessible resource database of images, videos, and animations of cells, capturing a wide diversity of organisms, cell types, and cellular processes. The Cell Image Library has been merged with "Cell Centered Datab ...
29%

BARD


BioAssay Research Database
29%

Cell cycle database (CellCycleDB)


A collection of genes and proteins involved in human and yeast cell cycle.
29%

BARCdb


Biobanking Analysis Resource Catalogue
29%

CLIMA


Cell line integrated molecular authentication.
29%

CloneDB


Clones and libraries: sequence data, map positions and distributor information
29%

LUCApedia


Predicted genome, proteome, and reactome of LUCA
29%

AirLab


Cloud-based platform to manage and share antibody-based single-cell research.
29%

ESCDb


Database which collects human and mouse embryonic stem cell related datasets. These datasets cover perturbation (both knock-down and overexpression) and chromatin immunoprecipitation (ChIP) experiments in embryonic stem (ES) and carcinoma (EC) cell l ...
29%

Culture collection of algae and protozoa (CCAP)


Culture collection of algae and protozoa.
29%

FunGenES


A database and web application for analyzing embryonic stem cells differentiation process on mouse model. The data is collected by FunGenES consortium and organized into six clusters to facilitate data mining.
29%

LinkPhinder


Accurate Prediction of Kinase-Substrate Networks Using Knowledge Graphs. Abstract Phosphorylation of specific substrates by protein kinases is a key control mechanism for vital cell-fate decisions and other cellular processes. However, discovering s ...
29%

The Taenia solium Genome Project


The Taenia solium genome project is a whole genome sequencing project of the parasite Taenia solium, the causal agent of human and porcine cysticercosis; a disease that is still a public health problem of relevance in Mexico. It is being carried out ...
29%

REFOLDdb


REFOLD has merged to REFOLDdb. REFOLDdb is a unique database for the life sciences research community, providing annotated information for designing new refolding protocols and customizing existing methodologies. We envisage that this resource will ...
29%

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