Predicted genome, proteome, and reactome of LUCA
cell biology
REACTOME is an open-source, open access, manually curated and peer-reviewed pathway database.
The Princeton University MicroArray database (PUMAdb) stores raw and normalized data from microarray experiments, as well as their corresponding image files. In addition, PUMAdb provides interfaces fo ...
Plant metabolic, regulatory and signaling pathways
The Cellosaurus is a knowledge resource on cell lines. It attempts to describe all cell lines used in biomedical research. Its scope includes: Immortalized cell lines; naturally immortal cell lines (e ...
Macro- and micronuclear genes in spirotrichous ciliates
The PCL file format is a tab delimited file format that describes an expression dataset.
SHOGoiN Cell Database is a repository for accumulating and integrating diverse human cell information to support a wide range of cell research at the single-cell resolution. It is an extension of the ...
Useful biological numbers
Cell Bank/Stem Cell Bank is a nonprofit biological resource center, which includes two divisions named as cell bank and stem cell bank. It is affiliated to Shanghai Institute of Biochemistry and Cell ...
GIANT2 (Genome-wide Integrated Analysis of gene Networks in Tissues) is an interactive web server that enables biomedical researchers to analyze their proteins and pathways of interest and generate hy ...
A curated repository of cell types with multifaceted characterization.
This library is a public and easily accessible resource database of images, videos, and animations of cells, capturing a wide diversity of organisms, cell types, and cellular processes. The Cell Image ...
The Cell Line Ontology (CLO) is a community-driven ontology that is developed to standardize and integrate cell line information and support computer-assisted reasoning. Thousands of cell lines have b ...
Rice proteome database
This is a data table format used in the PUMAdb workflow to transform a .pcl file into a .cdt (clustered data table) file which contains the original data, but reordered, to reflect the clustering.
A collection of genes and proteins involved in human and yeast cell cycle.
IMGT-ONTOLOGY provides a specific vocabulary of the terminology to be used in immunogenetics and immunoinformatics. The ontology allows for the standardization for immunogenetics data from genome, pro ...
>>>!!!<<< SMD has been retired. After approximately fifteen years of microarray-centric research service, the Stanford Microarray Database has been retired. We apologize for any inconvenience; please ...
The Molecular Connections Cell Line Ontology models primary and established cell lines-both normal and pathologic. It covers around 400 cell lines. This ontology has been built to include the major do ...
AlphaFold DB provides open access to 3D protein structure predictions for the human proteome and 20 other model organisms to accelerate scientific research. It is based on AlphaFold AI system develope ...