GeneMarkeR

Names

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GeneMarkeR

metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:31.503879

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genemarker

metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:31.503879

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CellO

CellO (Cell Ontology-based classification) is a Python package for performing cell type classification of human RNA-seq data. CellO makes hierarchical predictions against the Cell Ontology. These clas ...

NBRP resources

System for collecting, preserving and providing bioresources for use as experimental materials for life science research.

lnc2cancer

Lnc2Cancer 3.0 includes comprehensive data on experimentally supported long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) associated with human cancers. In addition, web tools for analyzing l ...

CerealESTdb

The CerealESTdb, a user-friendly, searchable, and interactive database has been developed with a primary goal to provide information on assembled and annotated ESTs from four major crop plants, namely ...

ColorCells

ColorCells is a database of expression, classification and functions of lncRNAs in single cells. Single cell RNA sequencing (scRNA-Seq) technology has revealed significant differences in gene expressi ...

BrainPalmSeq

A curated RNA-seq database of palmitoylating and de-palmitoylating enzyme expression in the mouse brain.

TISCH

Uniformly processed tumor (and microenvironment) scRNA-seq data

MTCards

A database of mitochondrial genome variants in chinese population

Cancer RNA-Seq Nexus

PlanExp

PlanExp is an intuitive integration of complex RNA-seq datasets with planarian omics resources.

Bibliome Variant Database

The Bibliome Variant Database is a collection of variants mined from open-access primary literature. All variants included in the database have been mapped to the human genome and are presented in a m ...

Spatio-temporal cell atlas of the human brain

STAB is a comprehensive cell atlas resource for the human brain, containing single-cell gene expression profiling of 42 cell subtypes across 20 brain regions and 11 developmental periods. With cell su ...

TF-Marker

A comprehensive manually curated database for transcription factors and related markers in specific cell and tissue types in human.

SPICA

The Swiss Portal for Immune Cell Analysis (SPICA) is a web resource dedicated to the exploration and analysis of single-cell RNA-seq data of immune cells.

PSRN

Plant stress RNA-Seq nexus (PSRN) - stress-specific transcriptome database in plant cells.

TissueNexus

A database of human tissue functional gene networks built with a large compendium of curated RNA-seq data.

ScType

Fully-automated and ultra-fast cell-type identification using specific marker combinations from single-cell transcriptomic data.

Cell Taxonomy

A curated repository of cell types with multifaceted characterization.

ncRNA-eQTL

A database to systematically evaluate the effects of SNPs on non-coding RNA expression across cancer types | Numerous studies indicate that ncRNAs have critical functions across biological processes, ...