FAIRsharing.q9neh8; Last edited: June 22, 2021, 11:59 a.m.; Last accessed: Jan 03 2022 7:09 p.m.

Gene Expression Database (GXD)
metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:37.496523

gxd
metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:37.496523

Other names: GXD, Gene Expression Database (GXD), gxd

The Gene Expression Database (GXD) is a community resource for gene expression information from the laboratory mouse. GXD stores and integrates different types of expression data and makes these data freely available in formats appropriate for comprehensive analysis. There is particular emphasis on endogenous gene expression during mouse development.

Webpage:

http://www.informatics.jax.org/expression.shtml

Licence:

Name: MGI Warranty Disclaimer and Copyright Notice
URL: http://www.informatics.jax.org/mgihome/other/copyright.shtml

Publications: (7)

Publications
More detailed information about this field from each metasource.

The mouse Gene Expression Database (GXD): 2014 update
PMID: 24163257
metasource: Fairsharing.org
version: FAIRsharing.org: GXD; MGI Mouse Gene Expression Database; DOI: https://doi.org/10.25504/FAIRsharing.q9neh8; Last edited: June 22, 2021, 11:59 a.m.; Last accessed: Jan 03 2022 7:09 p.m.

The mouse Gene Expression Database (GXD): 2019 update
PMID: 30335138
metasource: Fairsharing.org
version: FAIRsharing.org: GXD; MGI Mouse Gene Expression Database; DOI: https://doi.org/10.25504/FAIRsharing.q9neh8; Last edited: June 22, 2021, 11:59 a.m.; Last accessed: Jan 03 2022 7:09 p.m.

The mouse Gene Expression Database (GXD): 2011 update
PMID: 21062809
metasource: Fairsharing.org
version: FAIRsharing.org: GXD; MGI Mouse Gene Expression Database; DOI: https://doi.org/10.25504/FAIRsharing.q9neh8; Last edited: June 22, 2021, 11:59 a.m.; Last accessed: Jan 03 2022 7:09 p.m.

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:37.496523

The mouse Gene Expression Database (GXD): 2007 update
PMID: 17130151
metasource: Fairsharing.org
version: FAIRsharing.org: GXD; MGI Mouse Gene Expression Database; DOI: https://doi.org/10.25504/FAIRsharing.q9neh8; Last edited: June 22, 2021, 11:59 a.m.; Last accessed: Jan 03 2022 7:09 p.m.

The Mouse Gene Expression Database (GXD)
PMID: 11125060
metasource: Fairsharing.org
version: FAIRsharing.org: GXD; MGI Mouse Gene Expression Database; DOI: https://doi.org/10.25504/FAIRsharing.q9neh8; Last edited: June 22, 2021, 11:59 a.m.; Last accessed: Jan 03 2022 7:09 p.m.

The mouse Gene Expression Database (GXD): 2021 update
PMID: 33104772
metasource: Fairsharing.org
version: FAIRsharing.org: GXD; MGI Mouse Gene Expression Database; DOI: https://doi.org/10.25504/FAIRsharing.q9neh8; Last edited: June 22, 2021, 11:59 a.m.; Last accessed: Jan 03 2022 7:09 p.m.

The gene expression database for mouse development (GXD): putting developmental expression information at your fingertips
PMID: 24958384
metasource: Fairsharing.org
version: FAIRsharing.org: GXD; MGI Mouse Gene Expression Database; DOI: https://doi.org/10.25504/FAIRsharing.q9neh8; Last edited: June 22, 2021, 11:59 a.m.; Last accessed: Jan 03 2022 7:09 p.m.

The mouse Gene Expression Database (GXD): 2014 update PubMed citations: 53.

53 articles citing: The mouse Gene Expression Database (GXD): 2014 update

A cis-regulatory-directed pipeline for the identification of genes involved in cardiac development and disease. PMID:34906219
Imprinted Gene Expression and Function of the Dopa Decarboxylase Gene in the Developing Heart. PMID:34239874
Utilizing Organoid and Air-Liquid Interface Models as a Screening Method in the Development of New Host Defense Peptides. PMID:32509598
Analysis of pooled genome sequences from Djallonke and Sahelian sheep of Ghana reveals co-localisation of regions of reduced heterozygosity with candidate genes for disease resistance and adaptation to a tropical environment. PMID:31699027
High Functioning Autism with Missense Mutations in Synaptotagmin-Like Protein 4 (SYTL4) and Transmembrane Protein 187 (TMEM187) Genes: SYTL4- Protein Modeling, Protein-Protein Interaction, Expression Profiling and MicroRNA Studies. PMID:31323913
Common and distinct transcriptional signatures of mammalian embryonic lethality. PMID:31243271
Multi-omics "upstream analysis" of regulatory genomic regions helps identifying targets against methotrexate resistance of colon cancer. PMID:29900117
Genetic Dissection of a Supergene Implicates Tfap2a in Craniofacial Evolution of Threespine Sticklebacks. PMID:29593029
Susceptibility of different mouse strains to peri-implantitis. PMID:29044525
Selective Constraints on Coding Sequences of Nervous System Genes Are a Major Determinant of Duplicate Gene Retention in Vertebrates. PMID:28981708
MicroRNAs Induce a Permissive Chromatin Environment that Enables Neuronal Subtype-Specific Reprogramming of Adult Human Fibroblasts. PMID:28886366
Comparative studies of vertebrate iduronate 2-sulfatase (IDS) genes and proteins: evolution of A mammalian X-linked gene. PMID:28401457
Systems biology of facial development: contributions of ectoderm and mesenchyme. PMID:28363736
Transcriptomic dynamics of breast cancer progression in the MMTV-PyMT mouse model. PMID:28212608
eMouseAtlas: An atlas-based resource for understanding mammalian embryogenesis. PMID:28161522
The 24th annual Nucleic Acids Research database issue: a look back and upcoming changes. PMID:28053160
ARID3A is required for mammalian placenta development. PMID:27965054
The mouse Gene Expression Database (GXD): 2017 update. PMID:27899677
Single-Cell Resolution of Temporal Gene Expression during Heart Development. PMID:27840107
Genetics of Combined Pituitary Hormone Deficiency: Roadmap into the Genome Era. PMID:27828722
"Upstream Analysis": An Integrated Promoter-Pathway Analysis Approach to Causal Interpretation of Microarray Data. PMID:27600225
Transcriptome and proteome characterization of surface ectoderm cells differentiated from human iPSCs. PMID:27550649
Exome sequencing discloses KALRN homozygous variant as likely cause of intellectual disability and short stature in a consanguineous pedigree. PMID:27421267
Parallel evolution of male germline epigenetic poising and somatic development in animals. PMID:27294618
Defining the identity of mouse embryonic dermal fibroblasts. PMID:27265328
Using Whole Exome Sequencing to Identify Candidate Genes With Rare Variants In Nonsyndromic Cleft Lip and Palate. PMID:27229527
Representation of anatomy in online atlases and databases: a survey and collection of patterns for interface design. PMID:27206491
Data Sources for Trait Databases: Comparing the Phenomic Content of Monographs and Evolutionary Matrices. PMID:27191170
Role of renal urothelium in the development and progression of kidney disease. PMID:27115886
GeneAnalytics: An Integrative Gene Set Analysis Tool for Next Generation Sequencing, RNAseq and Microarray Data. PMID:26983021
Underlying genetic factors of the VATER/VACTERL association with special emphasis on the "Renal" phenotype. PMID:26857713
Gene profiling of embryonic skeletal muscle lacking type I ryanodine receptor Ca(2+) release channel. PMID:26831464
Accelerating Adverse Outcome Pathway Development Using Publicly Available Data Sources. PMID:26809562
A Novel de novo Mutation in CEACAM16 Associated with Postlingual Hearing Impairment. PMID:26648831
Animal models to study acute and chronic intestinal inflammation in mammals. PMID:26561503
Developing the eHistology Atlas. PMID:26500249
A mouse informatics platform for phenotypic and translational discovery. PMID:26314589
MouseMine: a new data warehouse for MGI. PMID:26092688
The mouse gene expression database: New features and how to use them effectively. PMID:26045019
Cardiac gene expression data and in silico analysis provide novel insights into human and mouse taste receptor gene regulation. PMID:25986534
MIsoMine: a genome-scale high-resolution data portal of expression, function and networks at the splice isoform level in the mouse. PMID:25953081
FNTM: a server for predicting functional networks of tissues in mouse. PMID:25940632
GXD: a community resource of mouse Gene Expression Data. PMID:25939429
What to compare and how: Comparative transcriptomics for Evo-Devo. PMID:25864439
Biochemical functional predictions for protein structures of unknown or uncertain function. PMID:25848497
The Mouse Genome Database (MGD): facilitating mouse as a model for human biology and disease. PMID:25348401
Mouse ENU Mutagenesis to Understand Immunity to Infection: Methods, Selected Examples, and Perspectives. PMID:25268389
Hybrid curation of gene-mutation relations combining automated extraction and crowdsourcing. PMID:25246425
Ligature-induced peri-implantitis in mice. PMID:25244403
Rapid identification of major-effect genes using the collaborative cross. PMID:25236450
Exome sequencing identifies a recurrent de novo ZSWIM6 mutation associated with acromelic frontonasal dysostosis. PMID:25105228
The gene expression database for mouse development (GXD): putting developmental expression information at your fingertips. PMID:24958384
The Mouse Genome Database: integration of and access to knowledge about the laboratory mouse. PMID:24285300
The mouse Gene Expression Database (GXD): 2019 update PubMed citations: 53.

53 articles citing: The mouse Gene Expression Database (GXD): 2019 update

Cytokine Receptor-Like Factor 3 (CRLF3) Contributes to Early Zebrafish Hematopoiesis. PMID:35795682
SLC38A10 Knockout Mice Display a Decreased Body Weight and an Increased Risk-Taking Behavior in the Open Field Test. PMID:35677577
Establishment of H3K9-methylated heterochromatin and its functions in tissue differentiation and maintenance. PMID:35562425
Incomplete lineage sorting and phenotypic evolution in marsupials. PMID:35447073
Exome sequencing of families from Ghana reveals known and candidate hearing impairment genes. PMID:35440622
The Cancer Research Database (CRDB): Integrated Platform to Gain Statistical Insight Into the Correlation Between Cancer and COVID-19. PMID:35430561
Whole Genome Sequencing Unravels New Genetic Determinants of Early-Onset Familial Osteoporosis and Low BMD in Malta. PMID:35205249
Postnatal expression of IGF2 is the norm in amniote vertebrates. PMID:35193406
The effects of Tbx15 and Pax1 on facial and other physical morphology in mice. PMID:34938962
A cis-regulatory-directed pipeline for the identification of genes involved in cardiac development and disease. PMID:34906219
Derivedness Index for Estimating Degree of Phenotypic Evolution of Embryos: A Study of Comparative Transcriptomic Analyses of Chordates and Echinoderms. PMID:34900995
Sex Differences in Embryonic Gonad Transcriptomes and Benzo[a]pyrene Metabolite Levels After Transplacental Exposure. PMID:34734245
Mouse Genome Informatics (MGI): latest news from MGD and GXD. PMID:34698891
Beyond Neurons: Long Distance Communication in Development and Cancer. PMID:34621752
Genomic and physiological analyses of the zebrafish atrioventricular canal reveal molecular building blocks of the secondary pacemaker region. PMID:34557935
A systems approach using Diversity Outbred mice distinguishes the cardiovascular effects and genetics of circulating GDF11 from those of its homolog, myostatin. PMID:34510201
Annotated expression and activity data for murine recombinase alleles and transgenes: the CrePortal resource. PMID:34482425
Coronavirus Disease 2019 and Liver Injury: A Retrospective Analysis of Hospitalized Patients in New York City. PMID:34447685
Lifespan-Associated Gene Expression Signatures of Recombinant BXD Mice Implicates Coro7 and Set in Longevity. PMID:34306034
Whole Blood Transcriptome Characterization of 3xTg-AD Mouse and Its Modulation by Transcranial Direct Current Stimulation (tDCS). PMID:34299250
Crk adaptor proteins are necessary for the development of the zebrafish retina. PMID:34268820
RGS14 Regulation of Post-Synaptic Signaling and Spine Plasticity in Brain. PMID:34201943
µ-Crystallin: A thyroid hormone binding protein. PMID:34020530
Prolactin-Releasing Peptide Differentially Regulates Gene Transcriptomic Profiles in Mouse Bone Marrow-Derived Macrophages. PMID:33923285
Mechanistic Drivers of Müllerian Duct Development and Differentiation Into the Oviduct. PMID:33763415
Identification of New miRNA-mRNA Networks in the Development of Non-syndromic Cleft Lip With or Without Cleft Palate. PMID:33732700
SSSPTA is essential for serine palmitoyltransferase function during development and hematopoiesis. PMID:33662400
Deletion of Orphan G Protein-Coupled Receptor GPR37L1 in Mice Alters Cardiovascular Homeostasis in a Sex-Specific Manner. PMID:33633567
Revealing the role of the human blood plasma proteome in obesity using genetic drivers. PMID:33627659
Cell-to-cell variation in gene expression and the aging process. PMID:33595768
KDM5A mutations identified in autism spectrum disorder using forward genetics. PMID:33350388
Axin-Mediated Regulation of Lifespan and Muscle Health in C. elegans Requires AMPK-FOXO Signaling. PMID:33319173
Epigenetic activation of a RAS/MYC axis in H3.3K27M-driven cancer. PMID:33277484
The mouse Gene Expression Database (GXD): 2021 update. PMID:33104772
Protocol to Design, Clone, and Validate sgRNAs for In Vivo Reverse Genetic Studies. PMID:33043306
The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals. PMID:33037820
Quantitative Proteomics Links the LRRC59 Interactome to mRNA Translation on the ER Membrane. PMID:32788342
Spatial Transcriptomics of Nematodes Identifies Sperm Cells as a Source of Genomic Novelty and Rapid Evolution. PMID:32785688
Gene expression of the IGF hormones and IGF binding proteins across time and tissues in a model reptile. PMID:32776803
Mitochondrial spongiotic brain disease: astrocytic stress and harmful rapamycin and ketosis effect. PMID:32737078
Hub Proteins Involved in RAW 264.7 Macrophages Exposed to Direct Current Electric Field. PMID:32599940
Genetic architecture underlying changes in carotenoid accumulation during the evolution of the blind Mexican cavefish, Astyanax mexicanus. PMID:32488995
Dichotomy between the transcriptomic landscape of naturally versus accelerated aged murine hearts. PMID:32424227
In Vivo Cell Fate Tracing Provides No Evidence for Mesenchymal to Epithelial Transition in Adult Fallopian Tube and Uterus. PMID:32402291
Reorganized 3D Genome Structures Support Transcriptional Regulation in Mouse Spermatogenesis. PMID:32315832
Conditional Single Vector CRISPR/SaCas9 Viruses for Efficient Mutagenesis in the Adult Mouse Nervous System. PMID:32209486
GXD's RNA-Seq and Microarray Experiment Search: using curated metadata to reliably find mouse expression studies of interest. PMID:32140729
In Vitro, In Vivo, and In Silico Methods for Assessment of Muscle Size and Muscle Growth Regulation. PMID:31939770
The ParaHox gene Cdx4 induces acute erythroid leukemia in mice. PMID:31770439
Biological Network Approaches and Applications in Rare Disease Studies. PMID:31614842
A Portal to Visualize Transcriptome Profiles in Mouse Models of Neurological Disorders. PMID:31561642
Keratinocyte-derived TGFβ is not required to maintain skin immune homeostasis. PMID:31118160
Mouse Genome Database (MGD) 2019. PMID:30407599
The mouse Gene Expression Database (GXD): 2011 update PubMed citations: 50.

50 articles citing: The mouse Gene Expression Database (GXD): 2011 update

Single-cell transcriptomics of human iPSC differentiation dynamics reveal a core molecular network of Parkinson's disease. PMID:35027645
Induction of Cyp450 enzymes by 4-thiazolidinone-based derivatives in 3T3-L1 cells in vitro. PMID:33219472
Cumulative contact frequency of a chromatin region is an intrinsic property linked to its function. PMID:32864204
Cyp2b-Knockdown Mice Poorly Metabolize Corn Oil and Are Age-Dependent Obese. PMID:30421529
Integrative Bioinformatic Analysis of Transcriptomic Data Identifies Conserved Molecular Pathways Underlying Ionizing Radiation-Induced Bystander Effects (RIBE). PMID:29186820
Role of CYP2B in Phenobarbital-Induced Hepatocyte Proliferation in Mice. PMID:28546505
Representation of anatomy in online atlases and databases: a survey and collection of patterns for interface design. PMID:27206491
Gbx2 is essential for maintaining thalamic neuron identity and repressing habenular characters in the developing thalamus. PMID:26297811
Dysregulation of Mitochondrial Functions and Osteogenic Differentiation in Cisd2-Deficient Murine Induced Pluripotent Stem Cells. PMID:26230298
The mouse gene expression database: New features and how to use them effectively. PMID:26045019
MIsoMine: a genome-scale high-resolution data portal of expression, function and networks at the splice isoform level in the mouse. PMID:25953081
GXD: a community resource of mouse Gene Expression Data. PMID:25939429
CpG island-mediated global gene regulatory modes in mouse embryonic stem cells. PMID:25405324
Identification of a face enhancer reveals direct regulation of LIM homeobox 8 (Lhx8) by wingless-int (WNT)/β-catenin signaling. PMID:25190800
Mouse IDGenes: a reference database for genetic interactions in the developing mouse brain. PMID:25145340
Differences in gene expression between mouse and human for dynamically regulated genes in early embryo. PMID:25089626
ENU Mutagenesis in the Mouse. PMID:25042716
Cell fusion enhances mesendodermal differentiation of human induced pluripotent stem cells. PMID:25004077
The gene expression database for mouse development (GXD): putting developmental expression information at your fingertips. PMID:24958384
TBX3 Directs Cell-Fate Decision toward Mesendoderm. PMID:24319661
CellFinder: a cell data repository. PMID:24304896
The mouse Gene Expression Database (GXD): 2014 update. PMID:24163257
GEISHA: an evolving gene expression resource for the chicken embryo. PMID:24150938
The enhancer landscape during early neocortical development reveals patterns of dense regulation and co-option. PMID:24009522
EMAP/EMAPA ontology of mouse developmental anatomy: 2013 update. PMID:23972281
A yeast one-hybrid and microfluidics-based pipeline to map mammalian gene regulatory networks. PMID:23917988
LifeMap Discovery™: the embryonic development, stem cells, and regenerative medicine research portal. PMID:23874394
Heterogeneous conservation of Dlx paralog co-expression in jawed vertebrates. PMID:23840829
Integrating anatomy and function for zebrafish circuit analysis. PMID:23630469
TRACER: a resource to study the regulatory architecture of the mouse genome. PMID:23547943
Reuse of public genome-wide gene expression data. PMID:23269463
Differences in enhancer activity in mouse and zebrafish reporter assays are often associated with changes in gene expression. PMID:23253453
The mouse genome database: genotypes, phenotypes, and models of human disease. PMID:23175610
Manual Gene Ontology annotation workflow at the Mouse Genome Informatics Database. PMID:23110975
Web-based digital gene expression atlases for the mouse. PMID:22936000
BioGPS and GXD: mouse gene expression data-the benefits and challenges of data integration. PMID:22847375
The genomic landscape shaped by selection on transposable elements across 18 mouse strains. PMID:22703977
Comparative analysis of human and mouse expression data illuminates tissue-specific evolutionary patterns of miRNAs. PMID:22457063
Systematic approaches to central nervous system myelin. PMID:22441408
The mouse-human anatomy ontology mapping project. PMID:22434834
Mouse genetic and phenotypic resources for human genetics. PMID:22422677
Predicting the lethal phenotype of the knockout mouse by integrating comprehensive genomic data. PMID:22419784
A focused in situ hybridization screen identifies candidate transcriptional regulators of thymic epithelial cell development and function. PMID:22087235
Lentiviral-mediated RNAi knockdown yields a novel mouse model for studying Cyp2b function. PMID:22083726
The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouse. PMID:22075990
De novo genesis of enhancers in vertebrates. PMID:22069375
A comparative gene expression database for invertebrates. PMID:21861937
A gene-phenotype network for the laboratory mouse and its implications for systematic phenotyping. PMID:21625554
Mouse resources for craniofacial research. PMID:21309071
Mouse mutants and phenotypes: accessing information for the study of mammalian gene function. PMID:21185380
The mouse Gene Expression Database (GXD): 2007 update PubMed citations: 48.

48 articles citing: The mouse Gene Expression Database (GXD): 2007 update

Estimation of non-null SNP effect size distributions enables the detection of enriched genes underlying complex traits. PMID:32542026
Selective Constraints on Coding Sequences of Nervous System Genes Are a Major Determinant of Duplicate Gene Retention in Vertebrates. PMID:28981708
Representation of anatomy in online atlases and databases: a survey and collection of patterns for interface design. PMID:27206491
Stability-driven nonnegative matrix factorization to interpret spatial gene expression and build local gene networks. PMID:27071099
Burden analysis of rare microdeletions suggests a strong impact of neurodevelopmental genes in genetic generalised epilepsies. PMID:25950944
Integrated annotation and analysis of in situ hybridization images using the ImAnno system: application to the ear and sensory organs of the fetal mouse. PMID:25706271
The mouse Gene Expression Database (GXD): 2014 update. PMID:24163257
The AERO system: a 3D-like approach for recording gene expression patterns in the whole mouse embryo. PMID:24146773
In silico prediction of a disease-associated STIL mutant and its affect on the recruitment of centromere protein J (CENPJ). PMID:23772360
Hierarchical approaches for systems modeling in cardiac development. PMID:23463736
Identification of germ cell-specific genes in mammalian meiotic prophase. PMID:23445120
Tissue-specific functional networks for prioritizing phenotype and disease genes. PMID:23028291
BioGPS and GXD: mouse gene expression data-the benefits and challenges of data integration. PMID:22847375
A focused in situ hybridization screen identifies candidate transcriptional regulators of thymic epithelial cell development and function. PMID:22087235
Anatomy ontologies and potential users: bridging the gap. PMID:21995944
BioMart as an integration solution for the International Knockout Mouse Consortium. PMID:21930503
A comparative gene expression database for invertebrates. PMID:21861937
The GUDMAP database--an online resource for genitourinary research. PMID:21652655
The Mouse Tumor Biology Database (MTB): a central electronic resource for locating and integrating mouse tumor pathology data. PMID:21282667
The mouse Gene Expression Database (GXD): 2011 update. PMID:21062809
The Mouse Genome Database (MGD): premier model organism resource for mammalian genomics and genetics. PMID:21051359
Understanding kidney disease: toward the integration of regulatory networks across species. PMID:21044762
Characterising and predicting haploinsufficiency in the human genome. PMID:20976243
SCLD: a Stem Cell Lineage Database for the annotation of cell types and developmental lineages. PMID:20972216
The IKMC web portal: a central point of entry to data and resources from the International Knockout Mouse Consortium. PMID:20929875
Toward a complete in silico, multi-layered embryonic stem cell regulatory network. PMID:20890967
Mutations in SCARF2 are responsible for Van Den Ende-Gupta syndrome. PMID:20887961
The Renal Gene Ontology Annotation Initiative. PMID:20885853
Expression of the transcription factor, TFII-I, during post-implantation mouse embryonic development. PMID:20642858
Expectations, validity, and reality in gene expression profiling. PMID:20579843
Human intronic enhancers control distinct sub-domains of Gli3 expression during mouse CNS and limb development. PMID:20426846
Systematic image-driven analysis of the spatial Drosophila embryonic expression landscape. PMID:20087342
Identification of novel chromosomal regions associated with airway hyperresponsiveness in recombinant congenic strains of mice. PMID:20012967
The Mouse Genome Database: enhancements and updates. PMID:19864252
More than a decade of developmental gene expression atlases: where are we now? PMID:19822576
Knowledge-driven enhancements for task composition in bioinformatics. PMID:19796396
EMMA--mouse mutant resources for the international scientific community. PMID:19783817
EMAGE mouse embryo spatial gene expression database: 2010 update. PMID:19767607
Regulation of mouse embryonic stem cell neural differentiation by retinoic acid. PMID:19217899
Mutations in STIL, encoding a pericentriolar and centrosomal protein, cause primary microcephaly. PMID:19215732
The Mouse Genome Database genotypes::phenotypes. PMID:18981050
FlyEx, the quantitative atlas on segmentation gene expression at cellular resolution. PMID:18953041
Rapid identification of PAX2/5/8 direct downstream targets in the otic vesicle by combinatorial use of bioinformatics tools. PMID:18828907
MiMiR--an integrated platform for microarray data sharing, mining and analysis. PMID:18801157
Meta-analysis and profiling of cardiac expression modules. PMID:18780758
Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE). PMID:18327244
EMAGE--Edinburgh Mouse Atlas of Gene Expression: 2008 update. PMID:18077470
4DXpress: a database for cross-species expression pattern comparisons. PMID:17916571
The Mouse Gene Expression Database (GXD) PubMed citations: 25.

25 articles citing: The Mouse Gene Expression Database (GXD)

A Review of Current Standards and the Evolution of Histopathology Nomenclature for Laboratory Animals. PMID:30476141
Automated transition analysis of activated gene regulation during diauxic nutrient shift in Escherichia coli and adipocyte differentiation in mouse cells. PMID:29745848
Text mining in cancer gene and pathway prioritization. PMID:25392685
The mouse Gene Expression Database (GXD): 2011 update. PMID:21062809
Automated pipeline for atlas-based annotation of gene expression patterns: application to postnatal day 7 mouse brain. PMID:19698790
Towards the use of argumentation in bioinformatics: a gene expression case study. PMID:18586728
Databases of free expression. PMID:17143588
Mouse Tumor Biology Database (MTB): status update and future directions. PMID:17135195
The mouse Gene Expression Database (GXD): 2007 update. PMID:17130151
Bioinformatics methods for identifying candidate disease genes. PMID:16848981
GeneSeeker: extraction and integration of human disease-related information from web-based genetic databases. PMID:15980578
Anatomics: the intersection of anatomy and bioinformatics. PMID:15679867
Using ontologies to describe mouse phenotypes. PMID:15642100
The mouse Gene Expression Database (GXD): updates and enhancements. PMID:14681482
Pathbase: a database of mutant mouse pathology. PMID:14681470
Connecting sequence and biology in the laboratory mouse. PMID:12819150
Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia. PMID:12819125
The mouse genome sequence--the end of the tail, or just the beginning? PMID:12702199
Integrating computationally assembled mouse transcript sequences with the Mouse Genome Informatics (MGI) database. PMID:12620126
MGD: the Mouse Genome Database. PMID:12519980
CnidBase: The Cnidarian Evolutionary Genomics Database. PMID:12519972
MEPD: a Medaka gene expression pattern database. PMID:12519950
Extension and integration of the gene ontology (GO): combining GO vocabularies with external vocabularies. PMID:12466303
The impact of p53 loss on murine plasmacytoma development. PMID:12067213
The Mouse Genome Database (MGD): the model organism database for the laboratory mouse. PMID:11752269