Tag: cell


Found 41 sources
Source Match ReputationScore*

CellML


CellML language is an open standard based on the XML markup language. CellML is being developed by the Auckland Bioengineering Institute at the University of Auckland and affiliated research groups. The purpose of CellML is to store and exchange comp ...
100%

Cell Ontology


The Cell Ontology (CL) is a candidate OBO Foundry ontology for the representation of cell types. First described in 2005, the CL integrates cell types from the prokaryotic, fungal, and eukaryotic organisms. As a core component of the OBO Foundry, the ...
97%

GeneCards: human genes, protein and diseases


GeneCards is a searchable, integrated, database of human genes that provides concise genomic, transcriptomic, genetic, proteomic, functional and disease related information on all known and predicted human genes.
95%

Mouse Phenome Database


Characterizations of hundreds of strains of laboratory mice to facilitate translational discoveries and to assist in selection of strains for experimental studies. Data sets are voluntarily contributed by researchers or retrieved by us from public so ...
94%

Metabolomics Workbench


Experimental data generated by NIH Metabolomics Regional Comprehensive Metabolomics Resource Cores (RCMRC)s * and other NIH-sponsored projects is available for searching and analysis, via online interfaces. Users may also search the Metabolomics Work ...
91%

BioAssay Ontology


The BioAssay Ontology (BAO) describes chemical biology screening assays and their results including high-throughput screening (HTS) data for the purpose of categorizing assays and data analysis.
87%

BRENDA tissue / enzyme source


A structured controlled vocabulary for the source of an enzyme. It comprises terms for tissues, cell lines, cell types and cell cultures from uni- and multicellular organisms.
86%

Open Microscopy Environment eXtensible Markup Language


OME develops open-source software and data format standards for the storage and manipulation of biological microscopy data. It is a joint project between universities, research establishments, industry and the software development community. The purp ...
81%

Cell Line Ontology


The Cell Line Ontology (CLO) is a community-driven ontology that is developed to standardize and integrate cell line information and support computer-assisted reasoning. Thousands of cell lines have been artificially developed and used for different ...
79%

Cell Image Library


This library is a public and easily accessible resource database of images, videos, and animations of cells, capturing a wide diversity of organisms, cell types, and cellular processes. The purpose of this database is to advance research on cellular ...
77%

Allen Brain Atlas


Gene expression and neuroanatomical data.
72%

Cell Behavior Ontology


The Cell Behavior Ontology (CBO) describes multi-cell computational models. In particular to describe both the existential behaviors of cells (spatiality, growth, movement, adhesion, death, ...) and computational models of those behaviors.
68%

Cell Cycle Ontology


CCO contains genes, proteins, interactions (comprising genes or proteins that participate in them), processes from the cell cycle subtree of GO, molecular functions (GO), taxa, and ontological constructs (like an upper level ontology and relationship ...
67%

FlowRepository


FlowRepository is a database of flow cytometry experiments where you can query and download data collected and annotated according to the MIFlowCyt standard. Data are generally associated with peer reviewed manuscripts.
67%

Minimal Information About a Cellular Assay


The Minimum Information About a Cellular Assay (MIACA) was developed as an information guideline and a modular Cellular Assay Object Model (CA-OM) that is capable of covering the range of cellular assays possible and which is the basis for efficient ...
66%

EpiFactors


EpiFactors is a web-accessible database that provides broad information about human proteins and complexes involved in epigenetic regulation. It also lists corresponding genes and their expression levels in several samples, in particular 458 human pr ...
65%

BioImage Archive


The BioImage Archive stores and distributes biological images that are useful to life-science researchers. Its development will provide data archiving services to the broader bioimaging database community. This includes added-value bioimaging data re ...
64%

Ontology for MicroRNA Target


The purpose of the OMIT ontology is to establish data exchange standards and common data elements in the microRNA (miR) domain. Biologists (cell biologists in particular) and bioinformaticians can make use of OMIT to leverage emerging semantic techno ...
64%

CellFinder


CellFinder maps validated gene and protein expression, phenotype and images related to cell types.The data allow characterization and comparison of cell types and can be browsed by using the body browser and by searching for cells or genes. All cells ...
64%

SCPortalen


SCPortalen is a single-cell database created to facilitate and enable researchers to access and explore published single-cell datasets. It integrates human and mouse single-cell transcriptomics datasets, single-cell metadata, cell images and sequence ...
61%

American Type Culture Collection database


ATCC authenticates microorganisms and cell lines and manages logistics of long-term preservation and distribution of cultures for the scientific community. ATCC supports the cultures it acquires and authenticates with expert technical support, intell ...
61%

Cellular Microscopy Phenotype Ontology


Cellular Microscopy Phenotype Ontology (CMPO) is a species neutral ontology for describing general phenotypic observations relating to the whole cell, cellular components, cellular processes and cell populations
61%

Global Alliance for Genomics and Health Metadata Model


The metadata model for GA4GH, an international coalition of both public and private interested parties, formed to enable the sharing of genomic and clinical data.
60%

Cell Phenotype Ontology


The CPO is an ontology of morphological and physiological phenotypic characteristics of cells, cell components and cellular processes. Its prime application is to provide terms and uniform definition patterns for the annotation of cellular phenotypes ...
59%

Cell Culture Ontology


Cell Culture Ontology (CCONT) is an ontology for the formal representation of cell lines and their corresponding culture conditions.
58%

Dictyostelium Anatomy Ontology


The Dictyostelium Anatomy Ontology ontology describes the anatomy of the slime mold. It defines the structural makeup of Dictyostelium and its composing parts including the different cell types, throughout its life cycle. It has two main goals: (1) p ...
58%

C. elegans gross anatomy


A structured controlled vocabulary of the anatomy of Caenorhabditis elegans.
57%

Minimum Information About a Cellular Assay for Regenerative Medicine


Currently, there are more than 20 human cell information storage sites around the world. However, reproducibility and data exchange among different laboratories or cell information providers are usually inadequate or nonexistent because of the lack o ...
56%

FAANG metadata sample specification standard


The FAANG metadata sample specification document describes the principles and structure for the FAANG metadata guidance. The main goal of the FAANG standards is to ensure all FAANG samples are well described and that the description is well structure ...
53%

Common Access to Biological Resources and Information


CABRI will refine tools and test the formation of an integrated resource centre service linking catalogue databases of different organism types, genetic materials and other "biologicals" in Europe so that the user world-wide can access these relevant ...
52%

SHOGoiN


SHOGoiN Cell Database is a repository for accumulating and integrating diverse human cell information to support a wide range of cell research at the single-cell resolution. It is an extension of the human cell database, CELLPEDIA. The database consi ...
50%

FuGEFlow


FuGEFlow represents a collaborative effort to develop of flow cytometry experimental workflow description based on the FuGE model. The Functional Genomics Experiment data model (FuGE) describes common aspects of comprehensive, high-throughput experim ...
48%

Molecular Connections Cell Line Ontology


The Molecular Connections Cell Line Ontology models primary and established cell lines-both normal and pathologic. It covers around 400 cell lines. This ontology has been built to include the major domains in the field of biology like anatomy, bio-mo ...
48%

Neuroscience Information Framework Cell


NIF has developed a comprehensive vocabulary for annotating and searching neuroscience resources.
47%

FlyTrap


Drosophila transgenic lines created using an intron protein trap strategy
47%

UCSD-Nature Signaling Gateway Molecule Pages


Expert-authored and peer-reviewed information on mammalian proteins involved in cellular signaling
47%

Breast tissue cell lines


List of cell lines derived from breast tissue, both normal and pathological. The ontology in built in OWL with cross relation to classes- genetic variation, pathological condition, genes, chemicals and drugs.
44%

Germplasm Resources Information Network


GRIN provides National Genetic Resources Program (NGRP) personnel and germplasm users continuous access to databases for the maintenance of passport, characterization, evaluation, inventory, and distribution data important for the effective managemen ...
44%

SimTK


SimTK is a free project-hosting platform for the biomedical computation community that enables researchers to easily share their software, data, and models and provides the infrastructure so they can support and grow a community around their projects ...
44%

Minimum Information About Particle Tracking Experiments


The proposed Minimum Information About Particle Tracking Experiments (MIAPTE) reporting guidelines described here aims to deliver a set of rules representing the minimal information required to report and support interpretation and assessment of data ...
44%

BBMRI-ERIC Directory


BBMRI-ERIC is a European research infrastructure for biobanking. We bring together all the main players from the biobanking field – researchers, biobankers, industry, and patients – to boost biomedical research. To that end, we offer quality manageme ...
44%

*ReputationScore indicates how established a given datasource is. Find out more.




Need help integrating and/or managing biomedical data?