Allen Brain Atlas

Names

More detailed information about this field from each metasource. ×

Allen Brain Atlas

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

metasource: re3data.org
version: re3data.org: Allen Brain Atlas; editing status 2021-05-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3FP8R last accessed: 2022-11-04

metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

---

Data Portal

metasource: re3data.org
version: re3data.org: Allen Brain Atlas; editing status 2021-05-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3FP8R last accessed: 2022-11-04

---

allen_brain_atlas

metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

Close

Other names: Data Portal, allen_brain_atlas

Gene expression and neuroanatomical data.

Webpage:

Licence:

Publications:

Publications

More detailed information about this field from each metasource. ×

Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system
PMID: 23193282

metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

---

http://dx.doi.org/10.1093/nar/gks1042

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

Close

• Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system PubMed citations: 232.

  232 articles citing: Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system

  ×

  Deciphering spatial domains from spatially resolved transcriptomics with an adaptive graph attention auto-encoder. PMID:35365632

  ---

  Clinical and translational values of spatial transcriptomics. PMID:35365599

  ---

  Network Theoretical Approach to Explore Factors Affecting Signal Propagation and Stability in Dementia's Protein-Protein Interaction Network. PMID:35327643

  ---

  Detection of copy number variants and genes by chromosomal microarray in an Emirati neurodevelopmental disorders cohort. PMID:35325322

  ---

  Open Frontiers in Neural Cell Type Investigations; Lessons From Caenorhabditis elegans and Beyond, Toward a Multimodal Integration. PMID:35321480

  ---

  Biallelic variants in TRAPPC10 cause a microcephalic TRAPPopathy disorder in humans and mice. PMID:35298461

  ---

  Systems-Level Analysis of Genetic Variants Reveals Functional and Spatiotemporal Context in Treatment-resistant Schizophrenia. PMID:35278208

  ---

  The Case for Clinical Trials with Novel GABAergic Drugs in Diabetes Mellitus and Obesity. PMID:35207609

  ---

  Methods to Improve Molecular Diagnosis in Genomic Cold Cases in Pediatric Neurology. PMID:35205378

  ---

  Mitoquinone Helps Combat the Neurological, Cognitive, and Molecular Consequences of Open Head Traumatic Brain Injury at Chronic Time Point. PMID:35203460

  ---

  Untapped Neuroimaging Tools for Neuro-Oncology: Connectomics and Spatial Transcriptomics. PMID:35158732

  ---

  Sonogenetic control of mammalian cells using exogenous Transient Receptor Potential A1 channels. PMID:35140203

  ---

  Differential fate between oxytocin and vasopressin cells in the developing mouse brain. PMID:35028535

  ---

  NOWinBRAIN: a Large, Systematic, and Extendable Repository of 3D Reconstructed Images of a Living Human Brain Cum Head and Neck. PMID:35013825

  ---

  Relating Global and Local Connectome Changes to Dementia and Targeted Gene Expression in Alzheimer's Disease. PMID:35002653

  ---

  A Systematic, Open-Science Framework for Quantification of Cell-Types in Mouse Brain Sections Using Fluorescence Microscopy. PMID:34949993

  ---

  Network-based identification of miRNAs and transcription factors and in silico drug screening targeting δ-secretase involved in Alzheimer's disease. PMID:34917801

  ---

  Sex-Specific Microglial Activation and SARS-CoV-2 Receptor Expression Induced by Chronic Unpredictable Stress. PMID:34899189

  ---

  Single-cell transcriptome identifies molecular subtype of autism spectrum disorder impacted by de novo loss-of-function variants regulating glial cells. PMID:34802461

  ---

  Temporal and spatial transcriptomic dynamics across brain development in Xenopus laevis tadpoles. PMID:34751375

  ---

  Mitochondrial-nuclear cross-talk in the human brain is modulated by cell type and perturbed in neurodegenerative disease. PMID:34737414

  ---

  Circadian neurons in the paraventricular nucleus entrain and sustain daily rhythms in glucocorticoids. PMID:34599158

  ---

  Wolframin-1-expressing neurons in the entorhinal cortex propagate tau to CA1 neurons and impair hippocampal memory in mice. PMID:34524859

  ---

  Genetic predisposition to tinnitus in the UK Biobank population. PMID:34518561

  ---

  Learning interpretable cellular and gene signature embeddings from single-cell transcriptomic data. PMID:34489404

  ---

  A Positively Selected MAGEE2 LoF Allele Is Associated with Sexual Dimorphism in Human Brain Size and Shows Similar Phenotypes in Magee2 Null Mice. PMID:34464968

  ---

  Supervised Learning With Perceptual Similarity for Multimodal Gene Expression Registration of a Mouse Brain Atlas. PMID:34393747

  ---

  Whole-body integration of gene expression and single-cell morphology. PMID:34380046

  ---

  Genome-Wide Association Studies Reveal Neurological Genes for Dog Herding, Predation, Temperament, and Trainability Traits. PMID:34368281

  ---

  "Guilt by association" is not competitive with genetic association for identifying autism risk genes. PMID:34354131

  ---

  Three-dimensional mapping of neurofibrillary tangle burden in the human medial temporal lobe. PMID:34259858

  ---

  The Mystery of Extramitochondrial Proteins Lysine Succinylation. PMID:34199982

  ---

  To Ubiquitinate or Not to Ubiquitinate: TRIM17 in Cell Life and Death. PMID:34069831

  ---

  Stress-induced alterations of mesocortical and mesolimbic dopaminergic pathways. PMID:34040100

  ---

  Chromatin remodeler Arid1a regulates subplate neuron identity and wiring of cortical connectivity. PMID:34011608

  ---

  Introducing ADNP and SIRT1 as new partners regulating microtubules and histone methylation. PMID:33967268

  ---

  Generation of hypothalamic arcuate organoids from human induced pluripotent stem cells. PMID:33961804

  ---

  Inducible knockout of Clec16a in mice results in sensory neurodegeneration. PMID:33927318

  ---

  Transcriptomic expression of AMPA receptor subunits and their auxiliary proteins in the human brain. PMID:33915226

  ---

  Emerging Role of ODC1 in Neurodevelopmental Disorders and Brain Development. PMID:33806076

  ---

  C21orf91 Regulates Oligodendroglial Precursor Cell Fate-A Switch in the Glial Lineage? PMID:33796011

  ---

  Genetic control of retinal ganglion cell genesis. PMID:33782712

  ---

  Prioritization of candidate genes for a South African family with Parkinson's disease using in-silico tools. PMID:33770142

  ---

  Flexible annotation atlas of the mouse brain: combining and dividing brain structures of the Allen Brain Atlas while maintaining anatomical hierarchy. PMID:33737651

  ---

  Cortical structural differences in major depressive disorder correlate with cell type-specific transcriptional signatures. PMID:33712584

  ---

  In Search of Molecular Markers for Cerebellar Neurons. PMID:33673348

  ---

  Transcriptional analysis of sodium valproate in a serotonergic cell line reveals gene regulation through both HDAC inhibition-dependent and independent mechanisms. PMID:33649518

  ---

  Interspecies chimeric conditions affect the developmental rate of human pluripotent stem cells. PMID:33647016

  ---

  Genetic contributions to autism spectrum disorder. PMID:33634770

  ---

  Robust decomposition of cell type mixtures in spatial transcriptomics. PMID:33603203

  ---

  Single-cell transcriptomic analysis of the adult mouse spinal cord reveals molecular diversity of autonomic and skeletal motor neurons. PMID:33589834

  ---

  Exploring the secrets of brain transcriptional regulation: developing methodologies, recent significant findings, and perspectives. PMID:33547496

  ---

  Vitamin D and schizophrenia: 20 years on. PMID:33500553

  ---

  Social isolation uncovers a circuit underlying context-dependent territory-covering micturition. PMID:33443190

  ---

  Developmental exposure to diesel exhaust upregulates transcription factor expression, decreases hippocampal neurogenesis, and alters cortical lamina organization: relevance to neurodevelopmental disorders. PMID:33327933

  ---

  Protein Interaction Network Biology in Neuroscience. PMID:33314619

  ---

  Time-Varying Gene Network Analysis of Human Prefrontal Cortex Development. PMID:33304381

  ---

  Bridging the Brain and Data Sciences. PMID:33211552

  ---

  High-Resolution Transcriptomic and Proteomic Profiling of Heterogeneity of Brain-Derived Microglia in Multiple Sclerosis. PMID:33192299

  ---

  X-chromosome regulation and sex differences in brain anatomy. PMID:33171144

  ---

  Genome-wide meta-analysis of brain volume identifies genomic loci and genes shared with intelligence. PMID:33154357

  ---

  Normal Mouse Brain Proteome II: Analysis of Brain Regions by High-resolution Mass Spectrometry. PMID:33099477

  ---

  Modeling Reveals Human-Rodent Differences in H-Current Kinetics Influencing Resonance in Cortical Layer 5 Neurons. PMID:33068000

  ---

  The γ-Protocadherins Regulate the Survival of GABAergic Interneurons during Developmental Cell Death. PMID:33060174

  ---

  Functional relationships between recessive inherited genes and genes with de novo variants in autism spectrum disorder. PMID:33023636

  ---

  Bridging the Gap Between Fluid Biomarkers for Alzheimer's Disease, Model Systems, and Patients. PMID:32982716

  ---

  Cilia interactome with predicted protein-protein interactions reveals connections to Alzheimer's disease, aging and other neuropsychiatric processes. PMID:32973177

  ---

  CrustyBase: an interactive online database for crustacean transcriptomes. PMID:32928113

  ---

  Dissecting diagnostic heterogeneity in depression by integrating neuroimaging and genetics. PMID:32781460

  ---

  Evolution of Human Brain Atlases in Terms of Content, Applications, Functionality, and Availability. PMID:32728882

  ---

  Density Visualization Pipeline: A Tool for Cellular and Network Density Visualization and Analysis. PMID:32676020

  ---

  BRICseq Bridges Brain-wide Interregional Connectivity to Neural Activity and Gene Expression in Single Animals. PMID:32619423

  ---

  The transcriptional signature associated with human motile cilia. PMID:32616903

  ---

  A Chromatin Accessibility Atlas of the Developing Human Telencephalon. PMID:32610082

  ---

  Evolution and transition of expression trajectory during human brain development. PMID:32576137

  ---

  Developments from Bulk Optogenetics to Single-Cell Strategies to Dissect the Neural Circuits that Underlie Aberrant Motivational States. PMID:32513671

  ---

  Small Animal Shanoir (SAS) A Cloud-Based Solution for Managing Preclinical MR Brain Imaging Studies. PMID:32508612

  ---

  The (Un)Conscious Mouse as a Model for Human Brain Functions: Key Principles of Anesthesia and Their Impact on Translational Neuroimaging. PMID:32508601

  ---

  Transcriptional consequences of MBD5 disruption in mouse brain and CRISPR-derived neurons. PMID:32503625

  ---

  Species Classification for Neuroscience Literature Based on Span of Interest Using Sequence-to-Sequence Learning Model. PMID:32372933

  ---

  Quantitative cellular-resolution map of the oxytocin receptor in postnatally developing mouse brains. PMID:32313029

  ---

  Cathepsin B in neurodegeneration of Alzheimer's disease, traumatic brain injury, and related brain disorders. PMID:32305689

  ---

  Commentary: Putting 'Emotional Intelligences' in Their Place: Introducing the Integrated Model of Affect-Related Individual Differences. PMID:32300322

  ---

  Forecasting risk gene discovery in autism with machine learning and genome-scale data. PMID:32165711

  ---

  Diffeomorphic Registration With Intensity Transformation and Missing Data: Application to 3D Digital Pathology of Alzheimer's Disease. PMID:32116503

  ---

  Peripheral-to-central immune communication at the area postrema glial-barrier following bleomycin-induced sterile lung injury in adult rats. PMID:32097765

  ---

  A molecular gradient along the longitudinal axis of the human hippocampus informs large-scale behavioral systems. PMID:32075960

  ---

  Genetic evidence of gender difference in autism spectrum disorder supports the female-protective effect. PMID:32066658

  ---

  Critical exon indexing improves clinical interpretation of copy number variants in neurodevelopmental disorders. PMID:32042908

  ---

  ZEBrA: Zebra finch Expression Brain Atlas-A resource for comparative molecular neuroanatomy and brain evolution studies. PMID:32037563

  ---

  Exclusive neuronal detection of KGDHC-specific subunits in the adult human brain cortex despite pancellular protein lysine succinylation. PMID:31982949

  ---

  The evolution of brain structure captured in stereotyped cell count and cell type distributions. PMID:31945723

  ---

  A Cross-Species Systems Genetics Analysis Links APBB1IP as a Candidate for Schizophrenia and Prepulse Inhibition. PMID:31920576

  ---

  BEST: a web server for brain expression Spatio-temporal pattern analysis. PMID:31805847

  ---

  How Big Data and High-performance Computing Drive Brain Science. PMID:31805369

  ---

  Ocular Dominance Plasticity in Binocular Primary Visual Cortex Does Not Require C1q. PMID:31801811

  ---

  Whole-cortex mapping of common genetic influences on depression and a social deficits dimension. PMID:31727881

  ---

  Comparative analysis of cellular expression pattern of schizophrenia risk genes in human versus mouse cortex. PMID:31700606

  ---

  Enhanced and unified anatomical labeling for a common mouse brain atlas. PMID:31699990

  ---

  Genome-wide DNA methylation data from adult brain following prenatal immune activation and dietary intervention. PMID:31667312

  ---

  Dissecting the genetic basis of comorbid epilepsy phenotypes in neurodevelopmental disorders. PMID:31653223

  ---

  Integrated Analysis of Brain Transcriptome Reveals Convergent Molecular Pathways in Autism Spectrum Disorder. PMID:31649562

  ---

  PACAP and Other Neuropeptide Targets Link Chronic Migraine and Opioid-induced Hyperalgesia in Mouse Models. PMID:31649062

  ---

  Genetic Control of Expression and Splicing in Developing Human Brain Informs Disease Mechanisms. PMID:31626773

  ---

  Unsupervised machine learning using an imaging mass spectrometry dataset automatically reassembles grey and white matter. PMID:31519997

  ---

  Dynamical Electrical Complexity Is Reduced during Neuronal Differentiation in Autism Spectrum Disorder. PMID:31474529

  ---

  Cell numbers, distribution, shape, and regional variation throughout the murine hippocampal formation from the adult brain Allen Reference Atlas. PMID:31444616

  ---

  Large-scale neuroanatomical study uncovers 198 gene associations in mouse brain morphogenesis. PMID:31371714

  ---

  Degeneracy in hippocampal physiology and plasticity. PMID:31301166

  ---

  Think: Theory for Africa. PMID:31295253

  ---

  Locus coeruleus-CA1 projections are involved in chronic depressive stress-induced hippocampal vulnerability to transient global ischaemia. PMID:31270312

  ---

  Age and Sex-Related Changes to Gene Expression in the Mouse Spinal Cord. PMID:31267314

  ---

  Nuclei multiplexing with barcoded antibodies for single-nucleus genomics. PMID:31266958

  ---

  LINE1 and Mecp2 methylation of the adult striatum and prefrontal cortex exposed to prenatal immune activation. PMID:31193946

  ---

  Reconstruction and Simulation of a Scaffold Model of the Cerebellar Network. PMID:31156416

  ---

  GPR37 Signaling Modulates Migration of Olfactory Ensheathing Cells and Gonadotropin Releasing Hormone Cells in Mice. PMID:31143101

  ---

  An in-silico approach for discovery of microRNA-TF regulation of DISC1 interactome mediating neuronal migration. PMID:31098296

  ---

  Leveraging heterogeneity for neural computation with fading memory in layer 2/3 cortical microcircuits. PMID:31022182

  ---

  InTool Explorer: An Interactive Exploratory Analysis Tool for Versatile Visualizations of Neuroscientific Data. PMID:30914926

  ---

  Distinct Cortical-Thalamic-Striatal Circuits through the Parafascicular Nucleus. PMID:30905392

  ---

  A dynamic view of the proteomic landscape during differentiation of ReNcell VM cells, an immortalized human neural progenitor line. PMID:30778261

  ---

  Conflicting emergences. Weak vs. strong emergence for the modelling of brain function. PMID:30684520

  ---

  Single-cell transcriptomic analysis of mouse neocortical development. PMID:30635555

  ---

  Glioblastoma's Next Top Model: Novel Culture Systems for Brain Cancer Radiotherapy Research. PMID:30621226

  ---

  The selenium-containing compound 3-((4-chlorophenyl)selanyl)-1-methyl-1H-indole reverses depressive-like behavior induced by acute restraint stress in mice: modulation of oxido-nitrosative stress and inflammatory pathway. PMID:30610349

  ---

  Polygenic disruption of retinoid signalling in schizophrenia and a severe cognitive deficit subtype. PMID:30532020

  ---

  Born to Cry: A Genetic Dissection of Infant Vocalization. PMID:30420800

  ---

  A structural equation model for imaging genetics using spatial transcriptomics. PMID:30390165

  ---

  Identification of spatially associated subpopulations by combining scRNAseq and sequential fluorescence in situ hybridization data. PMID:30371680

  ---

  Mapping Molecular Datasets Back to the Brain Regions They are Extracted from: Remembering the Native Countries of Hypothalamic Expatriates and Refugees. PMID:30334222

  ---

  The Use of Stem Cell-Derived Neurons for Understanding Development and Disease of the Cerebellum. PMID:30319335

  ---

  Reproducibility of Molecular Phenotypes after Long-Term Differentiation to Human iPSC-Derived Neurons: A Multi-Site Omics Study. PMID:30245212

  ---

  Geppetto: a reusable modular open platform for exploring neuroscience data and models. PMID:30201843

  ---

  A UNIFIED STATISTICAL FRAMEWORK FOR SINGLE CELL AND BULK RNA SEQUENCING DATA. PMID:30174778

  ---

  Cell-type-specific interrogation of CeA Drd2 neurons to identify targets for pharmacological modulation of fear extinction. PMID:30135420

  ---

  On the Usage of Brain Atlases in Neuroimaging Research. PMID:30094652

  ---

  Microstructure-Informed Connectomics: Enriching Large-Scale Descriptions of Healthy and Diseased Brains. PMID:30079754

  ---

  Lysosomal Cathepsin Protease Gene Expression Profiles in the Human Brain During Normal Development. PMID:30008074

  ---

  A Web-Based Atlas Combining MRI and Histology of the Squirrel Monkey Brain. PMID:30006920

  ---

  Human brain gene expression profiles of the cathepsin V and cathepsin L cysteine proteases, with the PC1/3 and PC2 serine proteases, involved in neuropeptide production. PMID:29998195

  ---

  Mouse MRI shows brain areas relatively larger in males emerge before those larger in females. PMID:29976930

  ---

  Neuronal Dysfunction and Behavioral Abnormalities Are Evoked by Neural Cells and Aggravated by Inflammatory Microglia in Peroxisomal β-Oxidation Deficiency. PMID:29892213

  ---

  A comparative study of the genetic components of three subcategories of autism spectrum disorder. PMID:29875476

  ---

  Changing Trends in Computational Drug Repositioning. PMID:29874824

  ---

  Convergent Pathways in Idiopathic Autism Revealed by Time Course Transcriptomic Analysis of Patient-Derived Neurons. PMID:29849033

  ---

  Systematic interrogation of diverse Omic data reveals interpretable, robust, and generalizable transcriptomic features of clinically successful therapeutic targets. PMID:29782487

  ---

  Deconvolution of Human Brain Cell Type Transcriptomes Unraveled Microglia-Specific Potential Biomarkers. PMID:29755398

  ---

  Transcriptional Profiling of Somatostatin Interneurons in the Spinal Dorsal Horn. PMID:29717160

  ---

  Using single-cell genomics to understand developmental processes and cell fate decisions. PMID:29661792

  ---

  Influence of full-length dystrophin on brain volumes in mouse models of Duchenne muscular dystrophy. PMID:29601589

  ---

  Whole-organism clone tracing using single-cell sequencing. PMID:29590089

  ---

  Rare variants in axonogenesis genes connect three families with sound-color synesthesia. PMID:29507195

  ---

  The pharmacoepigenomics informatics pipeline defines a pathway of novel and known warfarin pharmacogenomics variants. PMID:29400612

  ---

  A three-dimensional stereotaxic atlas of the gray short-tailed opossum (Monodelphis domestica) brain. PMID:29214509

  ---

  Cross-Laboratory Analysis of Brain Cell Type Transcriptomes with Applications to Interpretation of Bulk Tissue Data. PMID:29204516

  ---

  Mutant-IDH1-dependent chromatin state reprogramming, reversibility, and persistence. PMID:29180699

  ---

  Why is there selective subcortical vulnerability in ADHD? Clues from postmortem brain gene expression data. PMID:29180674

  ---

  Computational and mathematical methods in brain atlasing. PMID:29096578

  ---

  Human brain atlasing: past, present and future. PMID:29096577

  ---

  The Stem Cell Marker Lgr5 Defines a Subset of Postmitotic Neurons in the Olfactory Bulb. PMID:28847812

  ---

  Income inequality, gene expression, and brain maturation during adolescence. PMID:28784996

  ---

  CD133 Regulates IL-1β Signaling and Neutrophil Recruitment in Glioblastoma. PMID:28736425

  ---

  Associating transcription factors and conserved RNA structures with gene regulation in the human brain. PMID:28720872

  ---

  Comparing the Expression of Genes Related to Serotonin (5-HT) in C57BL/6J Mice and Humans Based on Data Available at the Allen Mouse Brain Atlas and Allen Human Brain Atlas. PMID:28630769

  ---

  Functional Connectivity Mapping in the Animal Model: Principles and Applications of Resting-State fMRI. PMID:28539914

  ---

  Insulin Resistance as a Link between Amyloid-Beta and Tau Pathologies in Alzheimer's Disease. PMID:28515688

  ---

  Distribution of ELOVL4 in the Developing and Adult Mouse Brain. PMID:28507511

  ---

  Global gene expression profiling of healthy human brain and its application in studying neurological disorders. PMID:28420888

  ---

  The Open Anatomy Browser: A Collaborative Web-Based Viewer for Interoperable Anatomy Atlases. PMID:28396633

  ---

  PH20 is not expressed in murine CNS and oligodendrocyte precursor cells. PMID:28275653

  ---

  Network Reconstruction Reveals that Valproic Acid Activates Neurogenic Transcriptional Programs in Adult Brain Following Traumatic Injury. PMID:28271248

  ---

  Automated Ischemic Lesion Segmentation in MRI Mouse Brain Data after Transient Middle Cerebral Artery Occlusion. PMID:28197090

  ---

  Win-win data sharing in neuroscience. PMID:28139675

  ---

  BrainScope: interactive visual exploration of the spatial and temporal human brain transcriptome. PMID:28132031

  ---

  Transcriptomic profiling of purified patient-derived dopamine neurons identifies convergent perturbations and therapeutics for Parkinson's disease. PMID:28096185

  ---

  Biallelic SCN10A mutations in neuromuscular disease and epileptic encephalopathy. PMID:28078312

  ---

  Magnetic resonance fingerprinting based on realistic vasculature in mice. PMID:28043909

  ---

  Brain Vascular Imaging Techniques. PMID:28042833

  ---

  mRNA Transcriptomics of Galectins Unveils Heterogeneous Organization in Mouse and Human Brain. PMID:28018170

  ---

  Genome-wide changes in lncRNA, splicing, and regional gene expression patterns in autism. PMID:27919067

  ---

  Brain transcriptome atlases: a computational perspective. PMID:27909802

  ---

  The mouse Gene Expression Database (GXD): 2017 update. PMID:27899677

  ---

  NSDNA: a manually curated database of experimentally supported ncRNAs associated with nervous system diseases. PMID:27899613

  ---

  Accelerating glioblastoma drug discovery: Convergence of patient-derived models, genome editing and phenotypic screening. PMID:27825983

  ---

  Global analysis of gene expression and projection target correlations in the mouse brain. PMID:27747484

  ---

  Toward the holistic, reference, and extendable atlas of the human brain, head, and neck. PMID:27747483

  ---

  A bioimage informatics platform for high-throughput embryo phenotyping. PMID:27742664

  ---

  A cellular and regulatory map of the GABAergic nervous system of C. elegans. PMID:27740909

  ---

  Genome-wide association study of working memory brain activation. PMID:27671502

  ---

  The harmonizome: a collection of processed datasets gathered to serve and mine knowledge about genes and proteins. PMID:27374120

  ---

  NBLAST: Rapid, Sensitive Comparison of Neuronal Structure and Construction of Neuron Family Databases. PMID:27373836

  ---

  Representation of anatomy in online atlases and databases: a survey and collection of patterns for interface design. PMID:27206491

  ---

  The calcium sensor Copine-6 regulates spine structural plasticity and learning and memory. PMID:27194588

  ---

  RBFOX1 and RBFOX2 are dispensable in iPSCs and iPSC-derived neurons and do not contribute to neural-specific paternal UBE3A silencing. PMID:27146458

  ---

  Enrichr: a comprehensive gene set enrichment analysis web server 2016 update. PMID:27141961

  ---

  A map of terminal regulators of neuronal identity in Caenorhabditis elegans. PMID:27136279

  ---

  Characterization of piRNAs across postnatal development in mouse brain. PMID:27112104

  ---

  Clec16a is Critical for Autolysosome Function and Purkinje Cell Survival. PMID:26987296

  ---

  The Development and Analysis of Integrated Neuroscience Data. PMID:26903852

  ---

  MTD: a mammalian transcriptomic database to explore gene expression and regulation. PMID:26822098

  ---

  Golgi: Interactive Online Brain Mapping. PMID:26635596

  ---

  Generation and Disease Model Relevance of a Manganese Enhanced Magnetic Resonance Imaging-Based NOD/scid-IL-2Rγc(null) Mouse Brain Atlas. PMID:26556033

  ---

  Long non-coding RNAs in corticogenesis: deciphering the non-coding code of the brain. PMID:26516210

  ---

  Quantitative high-throughput gene expression profiling of human striatal development to screen stem cell-derived medium spiny neurons. PMID:26417608

  ---

  A gene expression resource generated by genome-wide lacZ profiling in the mouse. PMID:26398943

  ---

  Systems biology and gene networks in neurodevelopmental and neurodegenerative disorders. PMID:26149713

  ---

  Co-expression network of neural-differentiation genes shows specific pattern in schizophrenia. PMID:25981335

  ---

  Genes with de novo mutations are shared by four neuropsychiatric disorders discovered from NPdenovo database. PMID:25849321

  ---

  The Scalable Brain Atlas: Instant Web-Based Access to Public Brain Atlases and Related Content. PMID:25682754

  ---

  Subcellular localization of K+ channels in mammalian brain neurons: remarkable precision in the midst of extraordinary complexity. PMID:25611506

  ---

  Inter-individual variability contrasts with regional homogeneity in the human brain DNA methylome. PMID:25572316

  ---

  BRF1 mutations alter RNA polymerase III-dependent transcription and cause neurodevelopmental anomalies. PMID:25561519

  ---

  Mapping social behavior-induced brain activation at cellular resolution in the mouse. PMID:25558063

  ---

  Decoding neuroproteomics: integrating the genome, translatome and functional anatomy. PMID:25349915

  ---

  Reconstruction of the gene regulatory network involved in the sonic hedgehog pathway with a potential role in early development of the mouse brain. PMID:25299227

  ---

  Expression of ORAII, a plasma membrane resident subunit of the CRAC channel, in rodent and non-rodent species. PMID:25249026

  ---

  The Digital Ageing Atlas: integrating the diversity of age-related changes into a unified resource. PMID:25232097

  ---

  A multi-resource data integration approach: identification of candidate genes regulating cell proliferation during neocortical development. PMID:25191221

  ---

  Reconstruction of 3-dimensional histology volume and its application to study mouse mammary glands. PMID:25145969

  ---

  High-resolution mapping of transcriptional dynamics across tissue development reveals a stable mRNA-tRNA interface. PMID:25122613

  ---

  An inside job: how endosomal Na(+)/H(+) exchangers link to autism and neurological disease. PMID:25002837

  ---

  Allen Brain Atlas-Driven Visualizations: a web-based gene expression energy visualization tool. PMID:24904397

  ---

  Perturbed neural activity disrupts cerebral angiogenesis during a postnatal critical period. PMID:24305053

  ---

  Feed your head: neurodevelopmental control of feeding and metabolism. PMID:24274739

  ---

  Raphe GABAergic neurons mediate the acquisition of avoidance after social defeat. PMID:23986235

  ---

  An informatics approach to integrating genetic and neurological data in speech and language neuroscience. PMID:23949335

  ---

  Rax regulates hypothalamic tanycyte differentiation and barrier function in mice. PMID:23939786

  ---

  LifeMap Discovery™: the embryonic development, stem cells, and regenerative medicine research portal. PMID:23874394

  ---

  Computational genetic neuroanatomy of the developing mouse brain: dimensionality reduction, visualization, and clustering. PMID:23845024

  ---

  Progress toward treatments for synaptic defects in autism. PMID:23744158

  ---

  Mapping brain circuitry with a light microscope. PMID:23722211

  ---

  Yunis-Varón syndrome is caused by mutations in FIG4, encoding a phosphoinositide phosphatase. PMID:23623387
• http://dx.doi.org/10.1093/nar/gks1042

Tags:

Tags

More detailed information about this field from each metasource. ×

microarray data and other gene expression databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

---

rna sequencing data

metasource: re3data.org
version: re3data.org: Allen Brain Atlas; editing status 2021-05-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3FP8R last accessed: 2022-11-04

---

cell

metasource: re3data.org
version: re3data.org: Allen Brain Atlas; editing status 2021-05-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3FP8R last accessed: 2022-11-04

---

electrophysiology

metasource: re3data.org
version: re3data.org: Allen Brain Atlas; editing status 2021-05-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3FP8R last accessed: 2022-11-04

---

genomics

metasource: re3data.org
version: re3data.org: Allen Brain Atlas; editing status 2021-05-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3FP8R last accessed: 2022-11-04

---

human brain

metasource: re3data.org
version: re3data.org: Allen Brain Atlas; editing status 2021-05-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3FP8R last accessed: 2022-11-04

---

morphology

metasource: re3data.org
version: re3data.org: Allen Brain Atlas; editing status 2021-05-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3FP8R last accessed: 2022-11-04

---

mouse brain

metasource: re3data.org
version: re3data.org: Allen Brain Atlas; editing status 2021-05-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3FP8R last accessed: 2022-11-04

---

neurology

metasource: re3data.org
version: re3data.org: Allen Brain Atlas; editing status 2021-05-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3FP8R last accessed: 2022-11-04

---

neuroscience

metasource: re3data.org
version: re3data.org: Allen Brain Atlas; editing status 2021-05-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3FP8R last accessed: 2022-11-04

---

primate brain

metasource: re3data.org
version: re3data.org: Allen Brain Atlas; editing status 2021-05-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3FP8R last accessed: 2022-11-04

---

neurobiology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

---

mri

metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

---

gene expression

metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

---

gene transcripts

metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

---

imaging

metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

Close

microarray data and other gene expression rna sequencing data cell electrophysiology genomics human brain morphology mouse brain neurology neuroscience primate brain neurobiology mri gene expression gene transcripts imaging