Planarian Anatomy Ontology: a resource to connect data within and across experimental platforms.
PMID:34318308
The Ontology of the Amphioxus Anatomy and Life Cycle (AMPHX).
PMID:33981708
Automated generation of gene summaries at the Alliance of Genome Resources.
PMID:32559296
Two new functions in the WormBase Enrichment Suite.
PMID:32550381
WormBase: a modern Model Organism Information Resource.
PMID:31642470
Gene Ontology Causal Activity Modeling (GO-CAM) moves beyond GO annotations to structured descriptions of biological functions and systems.
PMID:31548717
Using WormBase: A Genome Biology Resource for Caenorhabditis elegans and Related Nematodes.
PMID:29761466
Textpresso Central: a customizable platform for searching, text mining, viewing, and curating biomedical literature.
PMID:29523070
COMICS: Cartoon Visualization of Omics Data in Spatial Context Using Anatomical Ontologies.
PMID:29083911
Tissue enrichment analysis for C. elegans genomics.
PMID:27618863
Representation of anatomy in online atlases and databases: a survey and collection of patterns for interface design.
PMID:27206491
Overlapping cell population expression profiling and regulatory inference in C. elegans.
PMID:26926147
WormBase 2016: expanding to enable helminth genomic research.
PMID:26578572
Ontology application and use at the ENCODE DCC.
PMID:25776021
Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR.
PMID:23160413
Evaluation of research in biomedical ontologies.
PMID:22962340
The modENCODE Data Coordination Center: lessons in harvesting comprehensive experimental details.
PMID:21856757
PhenomeNET: a whole-phenome approach to disease gene discovery.
PMID:21737429
Representing ontogeny through ontology: a developmental biologist's guide to the gene ontology.
PMID:19921742