Cell Phenotype Ontology
Names
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Cell Phenotype Ontology
metasource: Fairsharing.org
version: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
CPO
metasource: Fairsharing.org
version: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Names
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Cell Phenotype Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
CPO
metasource: Fairsharing.orgversion: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Names
More detailed information about this field from each metasource.
Cell Phenotype Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
CPO
metasource: Fairsharing.orgversion: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
The CPO is an ontology of morphological and physiological phenotypic characteristics of cells, cell components and cellular processes. Its prime application is to provide terms and uniform definition patterns for the annotation of cellular phenotypes. The CPO can be used for the annotation of observed abnormalities in domains, such as systems microscopy, in which cellular abnormalities are observed and for which no phenotype ontology has been created.
Description
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The CPO is an ontology of morphological and physiological phenotypic characteristics of cells, cell components and cellular processes. Its prime application is to provide terms and uniform definition patterns for the annotation of cellular phenotypes. The CPO can be used for the annotation of observed abnormalities in domains, such as systems microscopy, in which cellular abnormalities are observed and for which no phenotype ontology has been created.
metasource: Fairsharing.orgversion: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Webpage:
https://code.google.com/archive/p/cell-phenotype/Webpage
More detailed information about this field from each metasource.
https://code.google.com/archive/p/cell-phenotype/
metasource: Fairsharing.orgversion: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Licence:
Name: BSD-3-Clause License (Modified BSD License) (New BSD License)Licence name
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BSD-3-Clause License (Modified BSD License) (New BSD License)
metasource: Fairsharing.orgversion: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Licence URL
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https://opensource.org/licenses/BSD-3-Clause
metasource: Fairsharing.orgversion: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Publications:
Publications
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Semantic integration of physiology phenotypes with an application to the Cellular Phenotype Ontology
PMID: 22539675
metasource: Fairsharing.org
version: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Publications
More detailed information about this field from each metasource.
Semantic integration of physiology phenotypes with an application to the Cellular Phenotype Ontology
PMID: 22539675
metasource: Fairsharing.org
version: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
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Semantic integration of physiology phenotypes with an application to the Cellular Phenotype Ontology
PubMed citations: 14.
14 articles citing: Semantic integration of physiology phenotypes with an application to the Cellular Phenotype Ontology
Sharing and reusing cell image data. PMID:29851565
Improving the interoperability of biomedical ontologies with compound alignments. PMID:29316968
Integrating phenotype ontologies with PhenomeNET. PMID:29258588
The anatomy of phenotype ontologies: principles, properties and applications. PMID:28387809
How can functional annotations be derived from profiles of phenotypic annotations? PMID:28183267
The cellular microscopy phenotype ontology. PMID:27195102
A generic methodological framework for studying single cell motility in high-throughput time-lapse data. PMID:26072499
TermGenie - a web-application for pattern-based ontology class generation. PMID:25937883
POEAS: Automated Plant Phenomic Analysis Using Plant Ontology. PMID:25574136
Label-free drug discovery. PMID:24723889
CellFinder: a cell data repository. PMID:24304896
Learning to recognize phenotype candidates in the auto-immune literature using SVM re-ranking. PMID:24155869
Using ontologies to study cell transitions. PMID:24103098
FYPO: the fission yeast phenotype ontology. PMID:23658422
Tags:
Tags
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cell
metasource: Fairsharing.org
version: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
cell morphology
metasource: Fairsharing.org
version: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
morphology
metasource: Fairsharing.org
version: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
phenotype
metasource: Fairsharing.org
version: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Tags
More detailed information about this field from each metasource.
cell
metasource: Fairsharing.orgversion: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
cell morphology
metasource: Fairsharing.orgversion: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
morphology
metasource: Fairsharing.orgversion: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
phenotype
metasource: Fairsharing.orgversion: FAIRsharing.org: CPO; Cell Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.tb6w4b; Last edited: Feb. 13, 2020, 2:49 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
cell cell morphology morphology phenotype
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