Gramene: A curated, open-source, integrated data resource for comparative functional genomics in plants

Other names: Gramene, Gramene database, gramene

Gramene's purpose is to provide added value to plant genomics data sets available within the public sector, which will facilitate researchers' ability to understand the plant genomes and take advantage of genomic sequence known in one species for identifying and understanding corresponding genes, pathways and phenotypes in other plant species. It represents a broad spectrum of species ranging from unicellular photo-autotrophs, algae, monocots, dicots and other important taxonomic clades. Within Plant Reactome, a database portal of Gramene, there are over 60 plant genomes as well as pathways for more than 80 species.

Webpage:
http://www.gramene.org

Licence:
Name: Gramene Copyright Statement
URL: http://www.gramene.org/node/225

Publications: (15)

Tags:

chloroplast sequence coding sequence computational predictions dna sequences differential gene expression analysis gene gene ontology enrichment gene expression gene expression gene feature gene functional annotation gene model annotation gene name gene prediction gene report genetic interaction genetic map genetic marker genome genomic assembly mitochondrial sequence multiple sequence alignment nucleic acid sequence nucleic acid sequence alignment pathway model plastid sequence protein sequence identification rna sequence sequence alignment sequence annotation sequence feature sequence variant polypeptide region region plant plant genomics grain physiology, comparative plant genomes mapping plant biology molecular interactions, pathways and networks endocrinology and metabolism

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