Animal Quantitative Trait Loci (QTL) Database
Names
More detailed information about this field from each metasource.
Animal Quantitative Trait Loci (QTL) Database
metasource: Fairsharing.org
version: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Animal QTLdb
metasource: Fairsharing.org
version: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:26.587275
AnimalQTLdb
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Animal Quantitative Trait Loci
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
animal_qtldb
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:26.587275
Names
More detailed information about this field from each metasource.
Animal Quantitative Trait Loci (QTL) Database
metasource: Fairsharing.orgversion: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Animal QTLdb
metasource: Fairsharing.orgversion: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:26.587275
AnimalQTLdb
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Animal Quantitative Trait Loci
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
animal_qtldb
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:26.587275
Other names: Animal QTLdb, AnimalQTLdb, Animal Quantitative Trait Loci, animal_qtldb
Names
More detailed information about this field from each metasource.
Animal Quantitative Trait Loci (QTL) Database
metasource: Fairsharing.orgversion: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Animal QTLdb
metasource: Fairsharing.orgversion: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:26.587275
AnimalQTLdb
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Animal Quantitative Trait Loci
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
animal_qtldb
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:26.587275
The Animal Quantitative Trait Loci (QTL) Database (Animal QTLdb) strives to collect all publicly available trait mapping data, i.e. QTL (phenotype/expression, eQTL), candidate gene and association data (GWAS), and copy number variations (CNV) mapped to livestock animal genomes, in order to facilitate locating and comparing discoveries within and between species. New data and database tools are continually developed to align various trait mapping data to map-based genome features such as annotated genes.
Description
More detailed information about this field from each metasource.
The Animal Quantitative Trait Loci (QTL) Database (Animal QTLdb) strives to collect all publicly available trait mapping data, i.e. QTL (phenotype/expression, eQTL), candidate gene and association data (GWAS), and copy number variations (CNV) mapped to livestock animal genomes, in order to facilitate locating and comparing discoveries within and between species. New data and database tools are continually developed to align various trait mapping data to map-based genome features such as annotated genes.
metasource: Fairsharing.orgversion: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
The Animal Quantitative Trait Loci (QTL) database (AnimalQTLdb) is designed to house all publicly available QTL data on livestock animal species from which researchers can easily locate and compare QTL within species. The database tools are also added to link the QTL data to other types of genomic information, such as radiation hybrid (RH) maps, finger printed contig (FPC) physical maps, linkage maps, and comparative maps to the human genome, etc. On-going efforts are under way to apply the tool to other animal species, such as rat and mouse, and add more structural genome information for map alignments, in an attempt to aid comparative structural genomics studies.
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
This Animal Quantitative Trait Loci (QTL) database (Animal QTLdb) is designed to house all publicly available QTL and trait mapping data (i.e. trait and genome location association data; collectively called "QTL data" on this site) on livestock animal species for easily locating and making comparisons within and between species. New database tools are continuely added to align the QTL and association data to other types of genome information, such as annotated genes, RH / SNP markers, and human genome maps. Besides the QTL data from species listed below, the QTLdb is open to house QTL/association date from other animal species where feasible. Note that the JAS along with other journals, now require that new QTL/association data be entered into a QTL database as part of their publication requirements.
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
The Animal QTLdb and CorrDB are unique resources for livestock animal genetics and genomics research which have been used extensively by the international livestock genome research community.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:26.587275
Webpage:
https://www.animalgenome.org/QTLdbWebpage
More detailed information about this field from each metasource.
https://www.animalgenome.org/QTLdb
metasource: Fairsharing.orgversion: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:26.587275
http://www.animalgenome.org/QTLdb/
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
https://www.animalgenome.org/cgi-bin/QTLdb/index
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
Licence:
Name: otherLicence name
More detailed information about this field from each metasource.
other
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
CC-BY-4.0
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:26.587275
Licence URL
More detailed information about this field from each metasource.
https://www.animalgenome.org/QTLdb/app
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
Publications:
Publications
More detailed information about this field from each metasource.
Developmental progress and current status of the Animal QTLdb
PMID: 26602686
metasource: Fairsharing.org
version: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Bringing the Animal QTLdb and CorrDB into the future: meeting new challenges and providing updated services
PMID: 34850103
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:26.587275
http://dx.doi.org/10.1093/nar/gks1150
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications
More detailed information about this field from each metasource.
Developmental progress and current status of the Animal QTLdb
PMID: 26602686
metasource: Fairsharing.org
version: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Bringing the Animal QTLdb and CorrDB into the future: meeting new challenges and providing updated services
PMID: 34850103
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:26.587275
http://dx.doi.org/10.1093/nar/gks1150
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
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Developmental progress and current status of the Animal QTLdb
PubMed citations: 106.
106 articles citing: Developmental progress and current status of the Animal QTLdb
Comprehensive Analysis of Long Noncoding RNA Modified by m6A Methylation in Oxidative and Glycolytic Skeletal Muscles. PMID:35562992
Identification of novel alternative splicing associated with mastitis disease in Holstein dairy cows using large gap read mapping. PMID:35305573
Identifying Loci Under Positive Selection in Yellow Korean Cattle (Hanwoo). PMID:35210744
Transcriptome analysis reveals the potential roles of long non-coding RNAs in feed efficiency of chicken. PMID:35169237
Interference With ACSL1 Gene in Bovine Adipocytes: Transcriptome Profiling of mRNA and lncRNA Related to Unsaturated Fatty Acid Synthesis. PMID:34977220
Bringing the Animal QTLdb and CorrDB into the future: meeting new challenges and providing updated services. PMID:34850103
Comparative Transcriptome Analysis of Milk Somatic Cells During Lactation Between Two Intensively Reared Dairy Sheep Breeds. PMID:34349787
Analysis of long intergenic non-coding RNAs transcriptomic profiling in skeletal muscle growth during porcine embryonic development. PMID:34315913
Application of the targeted sequencing approach reveals the single nucleotide polymorphism (SNP) repertoire in microRNA genes in the pig genome. PMID:33972633
Classical, Molecular, and Genomic Cytogenetics of the Pig, a Clinical Perspective. PMID:33925534
Insights into adaption and growth evolution: a comparative genomics study on two distinct cattle breeds from Northern and Southern China. PMID:33614243
Different expression of lipid metabolism-related genes in Shandong black cattle and Luxi cattle based on transcriptome analysis. PMID:33318614
Integrated analysis of lncRNA, miRNA and mRNA reveals novel insights into the fertility regulation of large white sows. PMID:32928107
Genome-wide detection of signatures of selection in indicine and Brazilian locally adapted taurine cattle breeds using whole-genome re-sequencing data. PMID:32917133
Genetic Mapping of Quantitative Trait Loci for Egg Production and Egg Quality Traits in Chickens: a Review. PMID:32908402
RNA-Seq based genetic variant discovery provides new insights into controlling fat deposition in the tail of sheep. PMID:32782325
Gene Networks Driving Genetic Variation in Milk and Cheese-Making Traits of Spanish Assaf Sheep. PMID:32605032
An improved pig reference genome sequence to enable pig genetics and genomics research. PMID:32543654
Genome-wide scan highlights the role of candidate genes on phenotypic plasticity for age at first calving in Nellore heifers. PMID:32296097
Detection of rs665862918 (15-bp Indel) of the HIAT1 Gene and its Strong Genetic Effects on Growth Traits in Goats. PMID:32102183
Effect of a Single Nucleotide Polymorphism in the Cholecystokinin Type A Receptor Gene on Growth Traits of the Miyazaki Jitokko Chicken. PMID:32055203
Functional and population genetic features of copy number variations in two dairy cattle populations. PMID:31992181
Recent advances in understanding genetic variants associated with growth, carcass and meat productivity traits in sheep (Ovis aries): an update. PMID:31893215
Whole genome detection of recent selection signatures in Sarabi cattle: a unique Iranian taurine breed. PMID:31808064
Analysis of pooled genome sequences from Djallonke and Sahelian sheep of Ghana reveals co-localisation of regions of reduced heterozygosity with candidate genes for disease resistance and adaptation to a tropical environment. PMID:31699027
Inter- and intra-breed genome-wide copy number diversity in a large cohort of European equine breeds. PMID:31640551
A functional regulatory variant of MYH3 influences muscle fiber-type composition and intramuscular fat content in pigs. PMID:31603892
Animal-ImputeDB: a comprehensive database with multiple animal reference panels for genotype imputation. PMID:31584087
A targeted genotyping approach to enhance the identification of variants for lactation persistency in dairy cows. PMID:31581300
Comparative adipose transcriptome analysis digs out genes related to fat deposition in two pig breeds. PMID:31501489
Genome-wide association analysis of egg production performance in chickens across the whole laying period. PMID:31412760
Genome-Wide Association Study of Growth and Feeding Traits in Pekin Ducks. PMID:31404312
Genome Analysis Reveals Genetic Admixture and Signature of Selection for Productivity and Environmental Traits in Iraqi Cattle. PMID:31379916
Genome-Wide Association Analysis for Resistance to Infectious Pancreatic Necrosis Virus Identifies Candidate Genes Involved in Viral Replication and Immune Response in Rainbow Trout (Oncorhynchus mykiss). PMID:31324747
A large interactive visual database of copy number variants discovered in taurine cattle. PMID:31241156
Causal phenotypic networks for egg traits in an F2 chicken population. PMID:31240383
Functional annotation and Bayesian fine-mapping reveals candidate genes for important agronomic traits in Holstein bulls. PMID:31240250
Genomic measures of inbreeding in the Norwegian-Swedish Coldblooded Trotter and their associations with known QTL for reproduction and health traits. PMID:31132983
In silico genome-wide miRNA-QTL-SNPs analyses identify a functional SNP associated with mastitis in Holsteins. PMID:31096910
Genome-wide association study and genomic predictions for exterior traits in Yorkshire pigs1. PMID:31087081
Genome-wide association studies for 30 haematological and blood clinical-biochemical traits in Large White pigs reveal genomic regions affecting intermediate phenotypes. PMID:31065004
Genome-Wide Investigation and Functional Analysis of Sus scrofa RNA Editing Sites across Eleven Tissues. PMID:31052161
Genome-Wide Association Study Reveals Candidate Genes for Growth Relevant Traits in Pigs. PMID:31024621
Loss of function mutations in essential genes cause embryonic lethality in pigs. PMID:30875370
Survey of allele specific expression in bovine muscle. PMID:30862965
Identification and Expression Analysis of Long Noncoding RNAs in Fat-Tail of Sheep Breeds. PMID:30787031
Exploring the genetics of trotting racing ability in horses using a unique Nordic horse model. PMID:30717660
Introgression of Chinese haplotypes contributed to the improvement of Danish Duroc pigs. PMID:30697340
Integrating Selection Mapping With Genetic Mapping and Functional Genomics. PMID:30619447
Genome-wide association study reveals novel loci associated with body size and carcass yields in Pekin ducks. PMID:30606130
Genetic control of longissimus dorsi muscle gene expression variation and joint analysis with phenotypic quantitative trait loci in pigs. PMID:30606113
Ensembl variation resources. PMID:30576484
A Meta-Analysis Including Pre-selected Sequence Variants Associated With Seven Traits in Three French Dairy Cattle Populations. PMID:30459810
Building a livestock genetic and genomic information knowledgebase through integrative developments of Animal QTLdb and CorrDB. PMID:30407520
Detection of copy number variations in brown and white layers based on genotyping panels with different densities. PMID:30400769
A genome-wide detection of selection signatures in conserved and commercial pig breeds maintained in Poland. PMID:30348079
Differences in gene expression profiles for subcutaneous adipose, liver, and skeletal muscle tissues between Meishan and Landrace pigs with different backfat thicknesses. PMID:30240433
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. PMID:30239679
Genomic Analysis To Identify Signatures of Artificial Selection and Loci Associated with Important Economic Traits in Duroc Pigs. PMID:30237295
Genomic Prediction of Complex Phenotypes Using Genic Similarity Based Relatedness Matrix. PMID:30233646
A comparative analysis of label-free liquid chromatography-mass spectrometry liver proteomic profiles highlights metabolic differences between pig breeds. PMID:30208024
Genome-wide definition of selective sweeps reveals molecular evidence of trait-driven domestication among elite goat (Capra species) breeds for the production of dairy, cashmere, and meat. PMID:30165633
Genomic Insights Into the Multiple Factors Controlling Abdominal Fat Deposition in a Chicken Model. PMID:30073018
Genetic variations for egg quality of chickens at late laying period revealed by genome-wide association study. PMID:30018363
Polygenic Basis and Variable Genetic Architectures Contribute to the Complex Nature of Body Weight -A Genome-Wide Study in Four Chinese Indigenous Chicken Breeds. PMID:30013594
Identification of putative regulatory regions and transcription factors associated with intramuscular fat content traits. PMID:29945546
Genome-wide association study on chicken carcass traits using sequence data imputed from SNP array. PMID:29936586
The identification of novel regions for reproduction trait in Landrace and Large White pigs using a single step genome-wide association study. PMID:29879826
Human-Mediated Introgression of Haplotypes in a Modern Dairy Cattle Breed. PMID:29848486
Genome-wide scan reveals population stratification and footprints of recent selection in Nelore cattle. PMID:29720080
Genome-Wide Association Studies Identify Candidate Genes for Coat Color and Mohair Traits in the Iranian Markhoz Goat. PMID:29670642
A survey of functional genomic variation in domesticated chickens. PMID:29661130
Trends in genome-wide and region-specific genetic diversity in the Dutch-Flemish Holstein-Friesian breeding program from 1986 to 2015. PMID:29642838
A Key Gene, PLIN1, Can Affect Porcine Intramuscular Fat Content Based on Transcriptome Analysis. PMID:29617344
Power and precision of QTL mapping in simulated multiple porcine F2 crosses using whole-genome sequence information. PMID:29614956
Eigen decomposition expedites longitudinal genome-wide association studies for milk production traits in Chinese Holstein. PMID:29576014
Genomic selection signatures in sheep from the Western Pyrenees. PMID:29566643
Artificial selection increased body weight but induced increase of runs of homozygosity in Hanwoo cattle. PMID:29561881
Screening for candidate genes related with histological microstructure, meat quality and carcass characteristic in pig based on RNA-seq data. PMID:29531190
Identification of molecular pathways and candidate genes associated with cocks' comb size trait by genome-wide transcriptome analysis. PMID:29386544
Genomic Region Containing Toll-Like Receptor Genes Has a Major Impact on Total IgM Antibodies Including KLH-Binding IgM Natural Antibodies in Chickens. PMID:29375555
Genomic study and Medical Subject Headings enrichment analysis of early pregnancy rate and antral follicle numbers in Nelore heifers. PMID:29293733
Whole-genome resequencing reveals candidate mutations for pig prolificacy. PMID:29263279
SNP co-association and network analyses identify E2F3, KDM5A and BACH2 as key regulators of the bovine milk fatty acid profile. PMID:29230020
A Strategy for Identifying Quantitative Trait Genes Using Gene Expression Analysis and Causal Analysis. PMID:29186889
A systematic survey to identify lethal recessive variation in highly managed pig populations. PMID:29121877
Identification of copy number variation in French dairy and beef breeds using next-generation sequencing. PMID:29065859
Signatures of Selection and Interspecies Introgression in the Genome of Chinese Domestic Pigs. PMID:29016799
Genome-wide mapping of large deletions and their population-genetic properties in dairy cattle. PMID:28985340
Transcriptomic profiling in muscle and adipose tissue identifies genes related to growth and lipid deposition. PMID:28877211
The Bos taurus-Bos indicus balance in fertility and milk related genes. PMID:28763475
Gene expression allelic imbalance in ovine brown adipose tissue impacts energy homeostasis. PMID:28665992
Identification and characterization of long intergenic noncoding RNAs in bovine mammary glands. PMID:28629368
Knowledge Discovery in Biological Databases for Revealing Candidate Genes Linked to Complex Phenotypes. PMID:28609292
Detection of QTL for traits related to adaptation to sub-optimal climatic conditions in chickens. PMID:28427323
Variant discovery in the sheep milk transcriptome using RNA sequencing. PMID:28202015
Identification of Candidate Genes for Reactivity in Guzerat (Bos indicus) Cattle: A Genome-Wide Association Study. PMID:28125592
Identification of novel candidate genes for the inverted teat defect in sows using a genome-wide marker panel. PMID:28050760
A Review of Selected Genes with Known Effects on Performance and Health of Cattle. PMID:28018909
Developing integrated crop knowledge networks to advance candidate gene discovery. PMID:28018846
Identification of growth trait related genes in a Yorkshire purebred pig population by genome-wide association studies. PMID:27809465
Single Nucleotide Polymorphism Discovery in Bovine Pituitary Gland Using RNA-Seq Technology. PMID:27606429
Genome-Wide Association Study Singles Out SCD and LEPR as the Two Main Loci Influencing Intramuscular Fat Content and Fatty Acid Composition in Duroc Pigs. PMID:27023885
Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants. PMID:27006194
An integrated in silico approach for functional and structural impact of non- synonymous SNPs in the MYH1 gene in Jeju Native Pigs. PMID:26847462
In silico screening of the chicken genome for overlaps between genomic regions: microRNA genes, coding and non-coding transcriptional units, QTL, and genetic variations. PMID:26800695 -
Bringing the Animal QTLdb and CorrDB into the future: meeting new challenges and providing updated services
PubMed citations: 1.
1 articles citing: Bringing the Animal QTLdb and CorrDB into the future: meeting new challenges and providing updated services
Population Genetic Structure and Selection Signature Analysis of Beijing Black Pig. PMID:35401688 - http://dx.doi.org/10.1093/nar/gks1150
Tags:
Tags
More detailed information about this field from each metasource.
copy number variation
metasource: Fairsharing.org
version: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
gene expression data
metasource: Fairsharing.org
version: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
genome-wide association study
metasource: Fairsharing.org
version: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
phenotype
metasource: Fairsharing.org
version: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
quantitative trait loci
metasource: Fairsharing.org
version: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
human and other vertebrate genomes
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
model organisms, comparative genomics
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
dna sequence
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
bioinformatics
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
cattle
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
chicken
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
chromosome
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
comparative genomics
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
gene association information
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
genetics
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
genomics
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
permuation
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
pig
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
rainbow trout
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
sheep
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
single-nucleotide polymorphism
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
structural genomics
metasource: re3data.org
version: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
genotype and phenotype
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:26.587275
zoology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:26.587275
dna polymorphism
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:26.587275
data submission, annotation and curation
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:26.587275
mapping
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:26.587275
Tags
More detailed information about this field from each metasource.
copy number variation
metasource: Fairsharing.orgversion: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
gene expression data
metasource: Fairsharing.orgversion: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
genome-wide association study
metasource: Fairsharing.orgversion: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
phenotype
metasource: Fairsharing.orgversion: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
quantitative trait loci
metasource: Fairsharing.orgversion: FAIRsharing.org: Animal QTLdb; Animal Quantitative Trait Loci (QTL) Database; DOI: https://doi.org/10.25504/FAIRsharing.HO0DyR; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
human and other vertebrate genomes
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
model organisms, comparative genomics
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
dna sequence
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
bioinformatics
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
cattle
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
chicken
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
chromosome
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
comparative genomics
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
gene association information
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
genetics
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
genomics
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
permuation
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
pig
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
rainbow trout
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
sheep
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
single-nucleotide polymorphism
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
structural genomics
metasource: re3data.orgversion: re3data.org: Animal QTLdb; editing status 2021-12-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HW4X last accessed: 2022-11-04
genotype and phenotype
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:26.587275
zoology
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:26.587275
dna polymorphism
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:26.587275
data submission, annotation and curation
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:26.587275
mapping
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:26.587275
copy number variation gene expression genome-wide association study phenotype quantitative trait loci human and other vertebrate genomes model organisms dna sequence bioinformatics cattle chicken chromosome comparative genomics gene association information genetics genomics permuation pig rainbow trout sheep single-nucleotide polymorphism structural genomics genotype and phenotype zoology dna polymorphism data submission, annotation and curation mapping
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