GenitoUrinary Development Molecular Anatomy Project
Names
More detailed information about this field from each metasource.
GenitoUrinary Development Molecular Anatomy Project
metasource: Fairsharing.org
version: None
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
GUDMAP
metasource: Fairsharing.org
version: None
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
Names
More detailed information about this field from each metasource.
GenitoUrinary Development Molecular Anatomy Project
metasource: Fairsharing.orgversion: None
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
GUDMAP
metasource: Fairsharing.orgversion: None
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
Names
More detailed information about this field from each metasource.
GenitoUrinary Development Molecular Anatomy Project
metasource: Fairsharing.orgversion: None
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
GUDMAP
metasource: Fairsharing.orgversion: None
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
The GenitoUrinary Development Molecular Anatomy Project (GUDMAP) provides data and tools to facilitate research on the GenitoUrinary (GU) tract for the scientific and medical community. In addition to current GUDMAP data, this resource incorporates data generated by previous phases of GUDMAP and by the (Re)Building a Kidney (RBK) consortium.
Description
More detailed information about this field from each metasource.
The GenitoUrinary Development Molecular Anatomy Project (GUDMAP) provides data and tools to facilitate research on the GenitoUrinary (GU) tract for the scientific and medical community. In addition to current GUDMAP data, this resource incorporates data generated by previous phases of GUDMAP and by the (Re)Building a Kidney (RBK) consortium.
metasource: Fairsharing.orgversion: None
The GenitoUrinary Development Molecular Anatomy Project (GUDMAP) is a consortium of laboratories working to provide the scientific and medical community with tools to facilitate research. The key components are: (1) a molecular atlas of gene expression for the developing organs of the GenitoUrinary (GU) tract; (2) a high resolution molecular anatomy that highlights development of the GU system; (3) mouse strains to facilitate developmental and functional studies within the GU system; (4) tutorials describing GU organogenesis; and (5) rapid access to primary data via the GUDMAP database.
metasource: re3data.orgversion: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
Webpage:
https://gudmap.orgWebpage
More detailed information about this field from each metasource.
https://gudmap.org
metasource: Fairsharing.orgversion: None
https://www.gudmap.org/index.html
metasource: re3data.orgversion: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
Licence:
Name: Public DomainLicence name
More detailed information about this field from each metasource.
Public Domain
metasource: re3data.orgversion: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
Licence URL
More detailed information about this field from each metasource.
https://www.gudmap.org/about/
metasource: re3data.orgversion: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
Publications:
Publications
More detailed information about this field from each metasource.
GUDMAP: the genitourinary developmental molecular anatomy project
PMID: 18287559
metasource: Fairsharing.org
version: None
The GUDMAP database--an online resource for genitourinary research
PMID: 21652655
metasource: Fairsharing.org
version: None
Publications
More detailed information about this field from each metasource.
GUDMAP: the genitourinary developmental molecular anatomy project
PMID: 18287559
metasource: Fairsharing.org
version: None
The GUDMAP database--an online resource for genitourinary research
PMID: 21652655
metasource: Fairsharing.org
version: None
-
GUDMAP: the genitourinary developmental molecular anatomy project
PubMed citations: 145.
145 articles citing: GUDMAP: the genitourinary developmental molecular anatomy project
Introducing blood flow in kidney explants by engraftment onto the chick chorioallantoic membrane is not sufficient to induce arterial smooth muscle cell development. PMID:35791886
TERT Expression in Wilms Tumor Is Regulated by Promoter Mutation or Hypermethylation, WT1, and N-MYC. PMID:35406427
Bioenergetic Evolution Explains Prevalence of Low Nephron Number at Birth: Risk Factor for CKD. PMID:35372951
Regrow or Repair: An Update on Potential Regenerative Therapies for the Kidney. PMID:34789545
Anatomical structures, cell types and biomarkers of the Human Reference Atlas. PMID:34750582
Single Cell Transcriptome Helps Better Understanding Crosstalk in Diabetic Kidney Disease. PMID:34485320
Spatial transcriptional mapping of the human nephrogenic program. PMID:34428401
Single cell regulatory landscape of the mouse kidney highlights cellular differentiation programs and disease targets. PMID:33859189
Molecular Actions Underlying Wolffian Duct Regression in Sexual Differentiation of Murine Reproductive Tracts. PMID:33684916
Pancreatlas: Applying an Adaptable Framework to Map the Human Pancreas in Health and Disease. PMID:33294866
Single-Cell Profiling of AKI in a Murine Model Reveals Novel Transcriptional Signatures, Profibrotic Phenotype, and Epithelial-to-Stromal Crosstalk. PMID:33115917
Advances in understanding vertebrate nephrogenesis. PMID:33092489
Kctd15 regulates nephron segment development by repressing Tfap2a activity. PMID:33028614
Sprr2f protects against renal injury by decreasing the level of reactive oxygen species in female mice. PMID:33017192
Modelling kidney disease using ontology: insights from the Kidney Precision Medicine Project. PMID:32939051
An era of single-cell genomics consortia. PMID:32929222
Single-Cell RNA Sequencing Reveals mRNA Splice Isoform Switching during Kidney Development. PMID:32651222
Identification and characterization of cellular heterogeneity within the developing renal interstitium. PMID:32586976
Integrated multi-omics approaches to improve classification of chronic kidney disease. PMID:32424281
Interstitial microRNA miR-214 attenuates inflammation and polycystic kidney disease progression. PMID:32182218
Canonical Wnt/β-catenin activity and differential epigenetic marks direct sexually dimorphic regulation of Irx3 and Irx5 in developing mouse gonads. PMID:32108023
Investigation of DNA variants specific to ROBO2 Isoform 'a' in Irish vesicoureteric reflux patients reveals marked CpG island variation. PMID:32041992
Quantitative classification of chromatin dynamics reveals regulators of intestinal stem cell differentiation. PMID:31862843
Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney. PMID:31689386
Cre-loxP Reporter Mouse Reveals Stochastic Activity of the Foxp3 Promoter. PMID:31616418
Histology Atlas of the Developing Mouse Urinary System With Emphasis on Prenatal Days E10.5-E18.5. PMID:31599209
Single-Cell Transcriptomic Map of the Human and Mouse Bladders. PMID:31462402
Tfap2a is a novel gatekeeper of nephron differentiation during kidney development. PMID:31160420
A tale of two tracts: history, current advances, and future directions of research on sexual differentiation of reproductive tracts†. PMID:31058957
Insights from deconvolution of cell subtype proportions enhance the interpretation of functional genomic data. PMID:31022271
Molecular determinants of WNT9b responsiveness in nephron progenitor cells. PMID:30978219
Thrombospondin Type 1 Domain-Containing 7A Localizes to the Slit Diaphragm and Stabilizes Membrane Dynamics of Fully Differentiated Podocytes. PMID:30971456
Loss of miR-17~92 results in dysregulation of Cftr in nephron progenitors. PMID:30838872
Direct reprogramming to human nephron progenitor-like cells using inducible piggyBac transposon expression of SNAI2-EYA1-SIX1. PMID:30827514
A genome wide association study for the number of animals born dead in domestic pigs. PMID:30616509
Homeogene emx1 is required for nephron distal segment development in zebrafish. PMID:30575756
A Cellular Anatomy of the Normal Adult Human Prostate and Prostatic Urethra. PMID:30566875
Astrocytes and microglia: Models and tools. PMID:30541903
Spontaneous calcium activity in metanephric mesenchymal cells regulates branching morphogenesis in the embryonic kidney. PMID:30496703
Comparative Analysis and Refinement of Human PSC-Derived Kidney Organoid Differentiation with Single-Cell Transcriptomics. PMID:30449713
Single-cell analysis of progenitor cell dynamics and lineage specification in the human fetal kidney. PMID:30166318
Ex vivo live cell tracking in kidney organoids using light sheet fluorescence microscopy. PMID:30048451
Geometry of Gene Expression Space of Wilms' Tumors From Human Patients. PMID:30029183
A blood capillary plexus-derived population of progenitor cells contributes to genesis of the dermal lymphatic vasculature during embryonic development. PMID:29773646
The non-human primate kidney transcriptome in fetal development. PMID:29603257
Conserved and Divergent Features of Mesenchymal Progenitor Cell Types within the Cortical Nephrogenic Niche of the Human and Mouse Kidney. PMID:29449449
Transcriptional regulatory control of mammalian nephron progenitors revealed by multi-factor cistromic analysis and genetic studies. PMID:29377931
Bringing Renal Biopsy Interpretation Into the Molecular Age With Single-Cell RNA Sequencing. PMID:29291760
Rare copy number variants identified in prune belly syndrome. PMID:29174092
Generation of interspecies limited chimeric nephrons using a conditional nephron progenitor cell replacement system. PMID:29170512
Genome-wide linkage and association study implicates the 10q26 region as a major genetic contributor to primary nonsyndromic vesicoureteric reflux. PMID:29097723
Postimplantation Mga expression and embryonic lethality of two gene-trap alleles. PMID:29066359
The developmental programme for genesis of the entire kidney is recapitulated in Wilms tumour. PMID:29040332
The promise of single-cell RNA sequencing for kidney disease investigation. PMID:28893418
A Gene Implicated in Activation of Retinoic Acid Receptor Targets Is a Novel Renal Agenesis Gene in Humans. PMID:28739660
Cellular heterogeneity in the ureteric progenitor niche and distinct profiles of branching morphogenesis in organ development. PMID:28705898
Novel de novo variant in EBF3 is likely to impact DNA binding in a patient with a neurodevelopmental disorder and expanded phenotypes: patient report, in silico functional assessment, and review of published cases. PMID:28487885
A brief review of kidney development, maturation, developmental abnormalities, and drug toxicity: juvenile animal relevancy. PMID:28458450
Diversification of Cell Lineages in Ureter Development. PMID:28028137
Direct reprogramming of fibroblasts into renal tubular epithelial cells by defined transcription factors. PMID:27820600
CellMapper: rapid and accurate inference of gene expression in difficult-to-isolate cell types. PMID:27687735
Techniques and Approaches to Genetic Analyses in Nephrological Disorders. PMID:27617137
Representation of anatomy in online atlases and databases: a survey and collection of patterns for interface design. PMID:27206491
Partitioning-Defective 1a/b Depletion Impairs Glomerular and Proximal Tubule Development. PMID:27185860
Role of renal urothelium in the development and progression of kidney disease. PMID:27115886
Development of the Mammalian Kidney. PMID:26969971
Uroplakin 1b is critical in urinary tract development and urothelial differentiation and homeostasis. PMID:26880456
Kidney disease in children: latest advances and remaining challenges. PMID:26831913
Novel Functions of Renin Precursors in Homeostasis and Disease. PMID:26661526
Proteomic analysis of embryonic kidney development: Heterochromatin proteins as epigenetic regulators of nephrogenesis. PMID:26359909
Genetic and Informatic Analyses Implicate Kif12 as a Candidate Gene within the Mpkd2 Locus That Modulates Renal Cystic Disease Severity in the Cys1cpk Mouse. PMID:26295839
Understanding normal and abnormal development of the Wolffian/epididymal duct by using transgenic mice. PMID:26112482
WNT/β-Catenin Signaling Is Required for Integration of CD24+ Renal Progenitor Cells into Glycerol-Damaged Adult Renal Tubules. PMID:26089915
Nephron proximal tubule patterning and corpuscles of Stannius formation are regulated by the sim1a transcription factor and retinoic acid in zebrafish. PMID:25542995
An integrated pipeline for the multidimensional analysis of branching morphogenesis. PMID:25411953
Wilms tumor suppressor, WT1, suppresses epigenetic silencing of the β-catenin gene. PMID:25331950
Renal Gene Expression Database (RGED): a relational database of gene expression profiles in kidney disease. PMID:25252782
Genitourinary defects associated with genomic deletions in 2p15 encompassing OTX1. PMID:25203062
Induction and patterning of the metanephric nephron. PMID:25194660
Single cell dissection of early kidney development: multilineage priming. PMID:25053437
Intragenic motifs regulate the transcriptional complexity of Pkhd1/PKHD1. PMID:24984783
Discovery of new glomerular disease-relevant genes by translational profiling of podocytes in vivo. PMID:24940801
Genome-wide association study and mouse expression data identify a highly conserved 32 kb intergenic region between WNT3 and WNT9b as possible susceptibility locus for isolated classic exstrophy of the bladder. PMID:24852367
A gene expression atlas of early craniofacial development. PMID:24780627
Translational profiles of medullary myofibroblasts during kidney fibrosis. PMID:24652793
A new genome scan for primary nonsyndromic vesicoureteric reflux emphasizes high genetic heterogeneity and shows linkage and association with various genes already implicated in urinary tract development. PMID:24498626
Coordination of kidney organogenesis by Wnt signaling. PMID:24445433
FOXD1 promotes nephron progenitor differentiation by repressing decorin in the embryonic kidney. PMID:24284212
In situ histone landscape of nephrogenesis. PMID:24169366
Generation of the podocyte and tubular components of an amniote kidney: timing of specification and a role for Wnt signaling. PMID:24154527
The genetics and epigenetics of kidney development. PMID:24011574
Genome-wide analysis of the p53 gene regulatory network in the developing mouse kidney. PMID:24003036
MicroRNAs: potential regulators of renal development genes that contribute to CAKUT. PMID:23996519
Building an atlas of gene expression driving kidney development: pushing the limits of resolution. PMID:23996451
Defining cell-type specificity at the transcriptional level in human disease. PMID:23950145
The luminal connection: from animal development to lumopathies. PMID:23820023
Loss of Sh3gl2/endophilin A1 is a common event in urothelial carcinoma that promotes malignant behavior. PMID:23814487
TNXB mutations can cause vesicoureteral reflux. PMID:23620400
Role for compartmentalization in nephron progenitor differentiation. PMID:23487745
Lower urinary tract development and disease. PMID:23408557
Recent advances in prostate development and links to prostatic diseases. PMID:23335485
Diacylglycerol kinase K variants impact hypospadias in a California study population. PMID:23177175
A transcriptome-wide screen for mRNAs enriched in fetal Leydig cells: CRHR1 agonism stimulates rat and mouse fetal testis steroidogenesis. PMID:23133512
A systems approach and skeletal myogenesis. PMID:22991503
A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract. PMID:22988430
BioGPS and GXD: mouse gene expression data-the benefits and challenges of data integration. PMID:22847375
Histone deacetylases in kidney development: implications for disease and therapy. PMID:22722820
FGF9 and FGF20 maintain the stemness of nephron progenitors in mice and man. PMID:22698282
Loss of the urothelial differentiation marker FOXA1 is associated with high grade, late stage bladder cancer and increased tumor proliferation. PMID:22590586
Mouse strain specific gene expression differences for illumina microarray expression profiling in embryos. PMID:22583621
Mammalian kidney development: principles, progress, and projections. PMID:22550230
E protein transcription factors are required for the development of CD4(+) lineage T cells. PMID:22425249
Pericyte TIMP3 and ADAMTS1 modulate vascular stability after kidney injury. PMID:22383695
A protein kinase A and Wnt-dependent network regulating an intermediate stage in epithelial tubulogenesis during kidney development. PMID:22290330
Bmp7 functions via a polarity mechanism to promote cloacal septation. PMID:22253716
Renal organogenesis: what can it tell us about renal repair and regeneration? PMID:22198432
A genome-wide association study of men with symptoms of testicular dysgenesis syndrome and its network biology interpretation. PMID:22140272
FGF/EGF signaling regulates the renewal of early nephron progenitors during embryonic development. PMID:22031548
Temporal differences in granulosa cell specification in the ovary reflect distinct follicle fates in mice. PMID:21976597
Nephron formation adopts a novel spatial topology at cessation of nephrogenesis. PMID:21963425
The BioMart interface to the eMouseAtlas gene expression database EMAGE. PMID:21930504
Zebrafish nephrogenesis involves dynamic spatiotemporal expression changes in renal progenitors and essential signals from retinoic acid and irx3b. PMID:21761484
Variation in human recombination rates and its genetic determinants. PMID:21698098
The GUDMAP database--an online resource for genitourinary research. PMID:21652655
Expression of metanephric nephron-patterning genes in differentiating mesonephric tubules. PMID:21491542
Identification of anchor genes during kidney development defines ontological relationships, molecular subcompartments and regulatory pathways. PMID:21386911
Genetic mosaic analysis reveals a major role for frizzled 4 and frizzled 8 in controlling ureteric growth in the developing kidney. PMID:21343368
Defining the genetic blueprint of kidney development. PMID:21336810
Microdissection of the gene expression codes driving nephrogenesis. PMID:21220959
The mouse Gene Expression Database (GXD): 2011 update. PMID:21062809
Understanding kidney disease: toward the integration of regulatory networks across species. PMID:21044762
Mutations in SOX17 are associated with congenital anomalies of the kidney and the urinary tract. PMID:20960469
Genetics of congenital anomalies of the kidney and urinary tract. PMID:20798957
Comparative gene expression analysis of genital tubercle development reveals a putative appendicular Wnt7 network for the epidermal differentiation. PMID:20510229
Patterning a complex organ: branching morphogenesis and nephron segmentation in kidney development. PMID:20493806
Computational toxicology: realizing the promise of the toxicity testing in the 21st century. PMID:20483702
Molecular anatomy of the kidney: what have we learned from gene expression and functional genomics? PMID:20049614
Neuropeptide Y functions as a facilitator of GDNF-induced budding of the Wolffian duct. PMID:19934016
Advances in early kidney specification, development and patterning. PMID:19906853
The bladder extracellular matrix. Part I: architecture, development and disease. PMID:19890339
An Hh-dependent pathway in lateral plate mesoderm enables the generation of left/right asymmetry. PMID:19879143
More than a decade of developmental gene expression atlases: where are we now? PMID:19822576
High-resolution gene expression analysis of the developing mouse kidney defines novel cellular compartments within the nephron progenitor population. PMID:19591821
Expression patterns of the aquaporin gene family during renal development: influence of genetic variability. PMID:19367412
Three-dimensional visualization of testis cord morphogenesis, a novel tubulogenic mechanism in development. PMID:19334288 -
The GUDMAP database--an online resource for genitourinary research
PubMed citations: 138.
138 articles citing: The GUDMAP database--an online resource for genitourinary research
Introducing blood flow in kidney explants by engraftment onto the chick chorioallantoic membrane is not sufficient to induce arterial smooth muscle cell development. PMID:35791886
TERT Expression in Wilms Tumor Is Regulated by Promoter Mutation or Hypermethylation, WT1, and N-MYC. PMID:35406427
Museum of spatial transcriptomics. PMID:35273392
Single-cell RNA sequencing reveals differential cell cycle activity in key cell populations during nephrogenesis. PMID:34789782
Regrow or Repair: An Update on Potential Regenerative Therapies for the Kidney. PMID:34789545
Mouse Genome Informatics (MGI): latest news from MGD and GXD. PMID:34698891
Crim1 and Kelch-like 14 exert complementary dual-directional developmental control over segmentally specific corticospinal axon projection targeting. PMID:34686337
Corticospinal neuron subpopulation-specific developmental genes prospectively indicate mature segmentally specific axon projection targeting. PMID:34686320
5-HT3 Signaling Alters Development of Sacral Neural Crest Derivatives That Innervate the Lower Urinary Tract. PMID:34202161
Generation of patterned kidney organoids that recapitulate the adult kidney collecting duct system from expandable ureteric bud progenitors. PMID:34131121
Single cell regulatory landscape of the mouse kidney highlights cellular differentiation programs and disease targets. PMID:33859189
Progesterone receptor isoform B regulates the Oxtr-Plcl2-Trpc3 pathway to suppress uterine contractility. PMID:33707208
Molecular Actions Underlying Wolffian Duct Regression in Sexual Differentiation of Murine Reproductive Tracts. PMID:33684916
Copy Number Variant Analysis and Genome-wide Association Study Identify Loci with Large Effect for Vesicoureteral Reflux. PMID:33597122
Transient receptor potential channels in sensory mechanisms of the lower urinary tract. PMID:33536636
Pancreatlas: Applying an Adaptable Framework to Map the Human Pancreas in Health and Disease. PMID:33294866
Cellular State Transformations Using Deep Learning for Precision Medicine Applications. PMID:33205131
Single-Cell Profiling of AKI in a Murine Model Reveals Novel Transcriptional Signatures, Profibrotic Phenotype, and Epithelial-to-Stromal Crosstalk. PMID:33115917
Advances in understanding vertebrate nephrogenesis. PMID:33092489
Kctd15 regulates nephron segment development by repressing Tfap2a activity. PMID:33028614
Sprr2f protects against renal injury by decreasing the level of reactive oxygen species in female mice. PMID:33017192
Modelling kidney disease using ontology: insights from the Kidney Precision Medicine Project. PMID:32939051
An era of single-cell genomics consortia. PMID:32929222
A novel distal convoluted tubule-specific Cre-recombinase driven by the NaCl cotransporter gene. PMID:32657158
Single-Cell RNA Sequencing Reveals mRNA Splice Isoform Switching during Kidney Development. PMID:32651222
Identification and characterization of cellular heterogeneity within the developing renal interstitium. PMID:32586976
Integrated multi-omics approaches to improve classification of chronic kidney disease. PMID:32424281
Interstitial microRNA miR-214 attenuates inflammation and polycystic kidney disease progression. PMID:32182218
Loss of Cx43 in Murine Sertoli Cells Leads to Altered Prepubertal Sertoli Cell Maturation and Impairment of the Mitosis-Meiosis Switch. PMID:32164318
Canonical Wnt/β-catenin activity and differential epigenetic marks direct sexually dimorphic regulation of Irx3 and Irx5 in developing mouse gonads. PMID:32108023
Investigation of DNA variants specific to ROBO2 Isoform 'a' in Irish vesicoureteric reflux patients reveals marked CpG island variation. PMID:32041992
Mutational analysis of genes with ureteric progenitor cell-specific expression in branching morphogenesis of the mouse kidney. PMID:32017326
Genetic manipulation of ureteric bud tip progenitors in the mammalian kidney through an Adamts18 enhancer driven tet-on inducible system. PMID:31734175
Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney. PMID:31689386
Spatiotemporal immune zonation of the human kidney. PMID:31604275
Histology Atlas of the Developing Mouse Urinary System With Emphasis on Prenatal Days E10.5-E18.5. PMID:31599209
Tfap2a is a novel gatekeeper of nephron differentiation during kidney development. PMID:31160420
A tale of two tracts: history, current advances, and future directions of research on sexual differentiation of reproductive tracts†. PMID:31058957
Wnt signaling mediates new nephron formation during zebrafish kidney regeneration. PMID:31036548
Insights from deconvolution of cell subtype proportions enhance the interpretation of functional genomic data. PMID:31022271
Molecular determinants of WNT9b responsiveness in nephron progenitor cells. PMID:30978219
A temporal and spatial map of axons in developing mouse prostate. PMID:30976911
Macrophages restrict the nephrogenic field and promote endothelial connections during kidney development. PMID:30758286
A Cellular Anatomy of the Normal Adult Human Prostate and Prostatic Urethra. PMID:30566875
Astrocytes and microglia: Models and tools. PMID:30541903
Spontaneous calcium activity in metanephric mesenchymal cells regulates branching morphogenesis in the embryonic kidney. PMID:30496703
Single-cell analysis of progenitor cell dynamics and lineage specification in the human fetal kidney. PMID:30166318
Osterix functions downstream of anti-Müllerian hormone signaling to regulate Müllerian duct regression. PMID:30061417
Toward mapping the human body at a cellular resolution. PMID:30058989
Ex vivo live cell tracking in kidney organoids using light sheet fluorescence microscopy. PMID:30048451
Geometry of Gene Expression Space of Wilms' Tumors From Human Patients. PMID:30029183
Germline mutations and somatic inactivation of TRIM28 in Wilms tumour. PMID:29912901
Evolution, kidney development, and chronic kidney disease. PMID:29857053
Advances in predictive in vitro models of drug-induced nephrotoxicity. PMID:29626199
Conditional ablation of the prorenin receptor in nephron progenitor cells results in developmental programming of hypertension. PMID:29611334
Evolution and Kidney Development: A Rosetta Stone for Nephrology. PMID:29449452
Conserved and Divergent Features of Mesenchymal Progenitor Cell Types within the Cortical Nephrogenic Niche of the Human and Mouse Kidney. PMID:29449449
Identification of novel candidate genes for 46,XY disorders of sex development (DSD) using a C57BL/6J-Y POS mouse model. PMID:29378665
Transcriptional regulatory control of mammalian nephron progenitors revealed by multi-factor cistromic analysis and genetic studies. PMID:29377931
Rare copy number variants identified in prune belly syndrome. PMID:29174092
Genome-wide linkage and association study implicates the 10q26 region as a major genetic contributor to primary nonsyndromic vesicoureteric reflux. PMID:29097723
Towards precision nephrology: the opportunities and challenges of genomic medicine. PMID:29043570
The developmental programme for genesis of the entire kidney is recapitulated in Wilms tumour. PMID:29040332
Refuting the hypothesis that semaphorin-3f/neuropilin-2 exclude blood vessels from the cap mesenchyme in the developing kidney. PMID:28929539
Psychrophilic proteases dramatically reduce single-cell RNA-seq artifacts: a molecular atlas of kidney development. PMID:28851704
A Gene Implicated in Activation of Retinoic Acid Receptor Targets Is a Novel Renal Agenesis Gene in Humans. PMID:28739660
Cellular heterogeneity in the ureteric progenitor niche and distinct profiles of branching morphogenesis in organ development. PMID:28705898
Transcription factor TFCP2L1 patterns cells in the mouse kidney collecting ducts. PMID:28577314
Evidence of In Vitro Preservation of Human Nephrogenesis at the Single-Cell Level. PMID:28552604
Repression of Interstitial Identity in Nephron Progenitor Cells by Pax2 Establishes the Nephron-Interstitium Boundary during Kidney Development. PMID:28535371
Novel de novo variant in EBF3 is likely to impact DNA binding in a patient with a neurodevelopmental disorder and expanded phenotypes: patient report, in silico functional assessment, and review of published cases. PMID:28487885
Migration pathways of sacral neural crest during development of lower urogenital tract innervation. PMID:28449850
Direct reprogramming of fibroblasts into renal tubular epithelial cells by defined transcription factors. PMID:27820600
Techniques and Approaches to Genetic Analyses in Nephrological Disorders. PMID:27617137
Role of CD34 family members in lumen formation in the developing kidney. PMID:27542690
Ablation of the epithelial-specific splicing factor Esrp1 results in ureteric branching defects and reduced nephron number. PMID:27404344
Representation of anatomy in online atlases and databases: a survey and collection of patterns for interface design. PMID:27206491
Partitioning-Defective 1a/b Depletion Impairs Glomerular and Proximal Tubule Development. PMID:27185860
Role of renal urothelium in the development and progression of kidney disease. PMID:27115886
Renal dysplasia in the neonate. PMID:26849006
Kidney disease in children: latest advances and remaining challenges. PMID:26831913
Irf6 directly regulates Klf17 in zebrafish periderm and Klf4 in murine oral epithelium, and dominant-negative KLF4 variants are present in patients with cleft lip and palate. PMID:26692521
Novel Functions of Renin Precursors in Homeostasis and Disease. PMID:26661526
Polygenic inheritance of cryptorchidism susceptibility in the LE/orl rat. PMID:26502805
The IUPHAR/BPS Guide to PHARMACOLOGY in 2016: towards curated quantitative interactions between 1300 protein targets and 6000 ligands. PMID:26464438
Renal stromal miRNAs are required for normal nephrogenesis and glomerular mesangial survival. PMID:26438731
Integrin-linked Kinase Controls Renal Branching Morphogenesis via Dual Specificity Phosphatase 8. PMID:26407593
Developing a functional urinary bladder: a neuronal context. PMID:26389118
Proteomic analysis of embryonic kidney development: Heterochromatin proteins as epigenetic regulators of nephrogenesis. PMID:26359909
Schistosoma haematobium egg-induced bladder urothelial abnormalities dependent on p53 are modulated by host sex. PMID:26160678
Understanding normal and abnormal development of the Wolffian/epididymal duct by using transgenic mice. PMID:26112482
The mouse gene expression database: New features and how to use them effectively. PMID:26045019
Deducing the stage of origin of Wilms' tumours from a developmental series of Wt1-mutant mice. PMID:26035382
Alternatively spliced isoforms of WT1 control podocyte-specific gene expression. PMID:25993318
GXD: a community resource of mouse Gene Expression Data. PMID:25939429
Nephron proximal tubule patterning and corpuscles of Stannius formation are regulated by the sim1a transcription factor and retinoic acid in zebrafish. PMID:25542995
An integrated pipeline for the multidimensional analysis of branching morphogenesis. PMID:25411953
Identification of a multipotent self-renewing stromal progenitor population during mammalian kidney organogenesis. PMID:25358792
Wilms tumor suppressor, WT1, suppresses epigenetic silencing of the β-catenin gene. PMID:25331950
A self-avoidance mechanism in patterning of the urinary collecting duct tree. PMID:25205115
Genitourinary defects associated with genomic deletions in 2p15 encompassing OTX1. PMID:25203062
Single cell dissection of early kidney development: multilineage priming. PMID:25053437
ENU Mutagenesis in the Mouse. PMID:25042716
The gene expression database for mouse development (GXD): putting developmental expression information at your fingertips. PMID:24958384
Representing kidney development using the gene ontology. PMID:24941002
Death associated protein kinase 2 is expressed in cortical interstitial cells of the mouse kidney. PMID:24906443
Genome-wide association study and mouse expression data identify a highly conserved 32 kb intergenic region between WNT3 and WNT9b as possible susceptibility locus for isolated classic exstrophy of the bladder. PMID:24852367
A gene expression atlas of early craniofacial development. PMID:24780627
Validating single-cell genomics for the study of renal development. PMID:24759149
Dre - Cre sequential recombination provides new tools for retinal ganglion cell labeling and manipulation in mice. PMID:24608965
A new genome scan for primary nonsyndromic vesicoureteric reflux emphasizes high genetic heterogeneity and shows linkage and association with various genes already implicated in urinary tract development. PMID:24498626
CellFinder: a cell data repository. PMID:24304896
FOXD1 promotes nephron progenitor differentiation by repressing decorin in the embryonic kidney. PMID:24284212
The mouse Gene Expression Database (GXD): 2014 update. PMID:24163257
GEISHA: an evolving gene expression resource for the chicken embryo. PMID:24150938
Molecular basis of renal adaptation in a murine model of congenital obstructive nephropathy. PMID:24023768
Genome-wide analysis of the p53 gene regulatory network in the developing mouse kidney. PMID:24003036
Identification of human nephron progenitors capable of generation of kidney structures and functional repair of chronic renal disease. PMID:23996934
MicroRNAs: potential regulators of renal development genes that contribute to CAKUT. PMID:23996519
Building an atlas of gene expression driving kidney development: pushing the limits of resolution. PMID:23996451
Bone morphogenetic protein signaling in nephron progenitor cells. PMID:23954916
The KUPNetViz: a biological network viewer for multiple -omics datasets in kidney diseases. PMID:23883183
LifeMap Discovery™: the embryonic development, stem cells, and regenerative medicine research portal. PMID:23874394
Heterogeneous conservation of Dlx paralog co-expression in jawed vertebrates. PMID:23840829
The luminal connection: from animal development to lumopathies. PMID:23820023
Direct transcriptional reprogramming of adult cells to embryonic nephron progenitors. PMID:23766537
C-kit(+) cells isolated from developing kidneys are a novel population of stem cells with regenerative potential. PMID:23733311
TNXB mutations can cause vesicoureteral reflux. PMID:23620400
FAK-Src signalling is important to renal collecting duct morphogenesis: discovery using a hierarchical screening technique. PMID:23616926
Recent advances in prostate development and links to prostatic diseases. PMID:23335485
Reuse of public genome-wide gene expression data. PMID:23269463
A systems approach and skeletal myogenesis. PMID:22991503
A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract. PMID:22988430
An optimized procedure for fluorescence-activated cell sorting (FACS) isolation of autonomic neural progenitors from visceral organs of fetal mice. PMID:22929412
eMouseAtlas, EMAGE, and the spatial dimension of the transcriptome. PMID:22847374
Mammalian kidney development: principles, progress, and projections. PMID:22550230
Renal organogenesis: what can it tell us about renal repair and regeneration? PMID:22198432
Temporal differences in granulosa cell specification in the ovary reflect distinct follicle fates in mice. PMID:21976597
Tags:
Tags
More detailed information about this field from each metasource.
animal organ development
metasource: Fairsharing.org
version: None
cell culture
metasource: Fairsharing.org
version: None
differential gene expression analysis
metasource: Fairsharing.org
version: None
gene expression data
metasource: Fairsharing.org
version: None
bioinformatics
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
biology
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
gene expression
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
microarray gene expression
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
mouse
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
nus muculus
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
ontology
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
stem cells
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
transgenic mouse
metasource: re3data.org
version: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
Tags
More detailed information about this field from each metasource.
animal organ development
metasource: Fairsharing.orgversion: None
cell culture
metasource: Fairsharing.orgversion: None
differential gene expression analysis
metasource: Fairsharing.orgversion: None
gene expression data
metasource: Fairsharing.orgversion: None
bioinformatics
metasource: re3data.orgversion: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
biology
metasource: re3data.orgversion: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
gene expression
metasource: re3data.orgversion: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
microarray gene expression
metasource: re3data.orgversion: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
mouse
metasource: re3data.orgversion: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
nus muculus
metasource: re3data.orgversion: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
ontology
metasource: re3data.orgversion: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
stem cells
metasource: re3data.orgversion: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
transgenic mouse
metasource: re3data.orgversion: re3data.org: GUDMAP; editing status 2022-03-28; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3M36P last accessed: 2022-11-04
animal organ development cell culture differential gene expression analysis gene expression bioinformatics gene expression microarray gene expression mouse nus muculus ontology stem cells transgenic mouse
Need help integrating and/or managing biomedical data?