The UCSC Archaeal Genome Browser

Other names: UCSC Archaeal Genome Browser

The UCSC Archaeal Genome Browser is a window on the biology of more than 100 microbial species from the domain Archaea. Basic gene annotation is derived from NCBI Genbank/RefSeq entries, with overlays of sequence conservation across multiple species, nucleotide and protein motifs, non-coding RNA predictions, operon predictions, and other types of bioinformatic analyses. In addition, we display available gene expression data (microarray or high-throughput RNA sequencing). Direct contributions or notices of publication of functional genomic data or bioinformatic analyses from archaeal research labs are very welcome.

Webpage:
http://archaea.ucsc.edu

Publications:

Tags:

crispr computational predictions dna sequences gc content gene expression gene functional annotation genome map insertion sequence multiple sequence alignment non-coding rna nucleic acid sequence alignment operon prediction orthology paralogous promoter rna sequence sequence annotation transcription factor binding site prediction genomics prokaryotic genome

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