Database of small human non-coding RNAs
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More detailed information about this field from each metasource.
Database of small human non-coding RNAs
metasource: Fairsharing.org
version: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
DASHR
metasource: Fairsharing.org
version: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Names
More detailed information about this field from each metasource.
Database of small human non-coding RNAs
metasource: Fairsharing.orgversion: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
DASHR
metasource: Fairsharing.orgversion: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Names
More detailed information about this field from each metasource.
Database of small human non-coding RNAs
metasource: Fairsharing.orgversion: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
DASHR
metasource: Fairsharing.orgversion: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Integrated annotation and sequencing-based expression data for all major classes of human small non-coding RNAs (sncRNAs) for both full sncRNA transcripts and mature sncRNA products derived from these larger RNAs.
Description
More detailed information about this field from each metasource.
Integrated annotation and sequencing-based expression data for all major classes of human small non-coding RNAs (sncRNAs) for both full sncRNA transcripts and mature sncRNA products derived from these larger RNAs.
metasource: Fairsharing.orgversion: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
DASHR, the database of all major classes of human small non-coding RNAs (sncRNAs), contains the most comprehensive information (sequence, annotation, sequencing-based expression levels, RNA secondary structure, and evidence of specific RNA processing) to date on both full sncRNA transcripts and mature sncRNA products derived from these larger RNAs in various human tissues. The database is publicly available at http://lisanwanglab.org/DASHR and the corresponding DASHR UCSC Genome Browser hub http://lisanwanglab.org/DASHR/tracks/hub.txt.
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Webpage:
http://lisanwanglab.org/DASHRWebpage
More detailed information about this field from each metasource.
http://lisanwanglab.org/DASHR
metasource: Fairsharing.orgversion: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications:
Publications
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DASHR: database of small human noncoding RNAs
PMID: 26553799
metasource: Fairsharing.org
version: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
http://dx.doi.org/10.1093/nar/gkv1188
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications
More detailed information about this field from each metasource.
DASHR: database of small human noncoding RNAs
PMID: 26553799
metasource: Fairsharing.org
version: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
http://dx.doi.org/10.1093/nar/gkv1188
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
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DASHR: database of small human noncoding RNAs
PubMed citations: 38.
38 articles citing: DASHR: database of small human noncoding RNAs
CRISPRs in the human genome are differentially expressed between malignant and normal adjacent to tumor tissue. PMID:35396392
Dysregulation of Human Somatic piRNA Expression in Parkinson's Disease Subtypes and Stages. PMID:35269612
MGcount: a total RNA-seq quantification tool to address multi-mapping and multi-overlapping alignments ambiguity in non-coding transcripts. PMID:35030988
Deciphering the tRNA-derived small RNAs: origin, development, and future. PMID:34934044
PIWI interacting RNAs perspectives: a new avenues in future cancer investigations. PMID:34723746
Non-coding RNAs in Regulating Tumor Angiogenesis. PMID:34616746
Systematic Identification and Functional Validation of New snoRNAs in Human Muscle Progenitors. PMID:34564318
piRNAs as Modulators of Disease Pathogenesis. PMID:33673453
Non-Coding RNA Databases in Cardiovascular Research. PMID:32887511
HiPR: High-throughput probabilistic RNA structure inference. PMID:32637050
Multiple information carried by RNAs: total eclipse or a light at the end of the tunnel? PMID:32559119
The Biogenesis and Functions of piRNAs in Human Diseases. PMID:32516734
PIWI-interacting RNAs are differentially expressed during cardiac differentiation of human pluripotent stem cells. PMID:32369512
MicroRNA 27a Is a Key Modulator of Cholesterol Biosynthesis. PMID:32071155
RNA-Seq profiling of deregulated miRs in CLL and their impact on clinical outcome. PMID:31932582
Mechanisms of tissue and cell-type specificity in heritable traits and diseases. PMID:31913361
Small noncoding RNA discovery and profiling with sRNAtools based on high-throughput sequencing. PMID:31885040
Identification of tRNA-derived ncRNAs in TCGA and NCI-60 panel cell lines and development of the public database tRFexplorer. PMID:31735953
SEAweb: the small RNA Expression Atlas web application. PMID:31598718
Inferring the Molecular Mechanisms of Noncoding Alzheimer's Disease-Associated Genetic Variants. PMID:31561366
Altered Fecal Small RNA Profiles in Colorectal Cancer Reflect Gut Microbiome Composition in Stool Samples. PMID:31530647
The full recovery of mice (Mus Musculus C57BL/6 strain) from virus-induced sarcoma after treatment with a complex of DDMC delivery system and sncRNAs. PMID:31193489
The cellular landscape of mid-size noncoding RNA. PMID:30843375
DASHR 2.0: integrated database of human small non-coding RNA genes and mature products. PMID:30668832
Non-coding RNAome of RPE cells under oxidative stress suggests unknown regulative aspects of Retinitis pigmentosa etiopathogenesis. PMID:30413775
Arena-Idb: a platform to build human non-coding RNA interaction networks. PMID:30367585
Mini viral RNAs act as innate immune agonists during influenza virus infection. PMID:30224800
Distribution of ncRNAs expression across hypothalamic-pituitary-gonadal axis in Capra hircus. PMID:29848285
SPAR: small RNA-seq portal for analysis of sequencing experiments. PMID:29733404
m6ASNP: a tool for annotating genetic variants by m6A function. PMID:29617790
Small non-coding RNA profiling in human biofluids and surrogate tissues from healthy individuals: description of the diverse and most represented species. PMID:29423032
Drosha drives the formation of DNA:RNA hybrids around DNA break sites to facilitate DNA repair. PMID:29416038
Systematic comparison of small RNA library preparation protocols for next-generation sequencing. PMID:29402217
m6AVar: a database of functional variants involved in m6A modification. PMID:29036329
Characterization of mouse serum exosomal small RNA content: The origins and their roles in modulating inflammatory response. PMID:28514744
DES-ncRNA: A knowledgebase for exploring information about human micro and long noncoding RNAs based on literature-mining. PMID:28387604
miRmine: a database of human miRNA expression profiles. PMID:28108447
YM500v3: a database for small RNA sequencing in human cancer research. PMID:27899625 - http://dx.doi.org/10.1093/nar/gkv1188
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gene expression data
metasource: Fairsharing.org
version: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
non-coding rna
metasource: Fairsharing.org
version: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
rna sequence
metasource: Fairsharing.org
version: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
rna sequencing
metasource: Fairsharing.org
version: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
sequence annotation
metasource: Fairsharing.org
version: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
rna sequence databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Tags
More detailed information about this field from each metasource.
gene expression data
metasource: Fairsharing.orgversion: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
non-coding rna
metasource: Fairsharing.orgversion: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
rna sequence
metasource: Fairsharing.orgversion: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
rna sequencing
metasource: Fairsharing.orgversion: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
sequence annotation
metasource: Fairsharing.orgversion: FAIRsharing.org: DASHR; Database of small human non-coding RNAs; DOI: https://doi.org/10.25504/FAIRsharing.ztvs34; Last edited: Feb. 20, 2019, 1:58 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
rna sequence databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
gene expression non-coding rna rna sequence rna sequence sequence annotation rna sequence
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