Medicago truncatula Genome Database
Names
More detailed information about this field from each metasource.
Medicago truncatula Genome Database
metasource: Fairsharing.org
version: FAIRsharing.org: MTGD; Medicago truncatula Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.5yH3KC; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
MTGD
metasource: Fairsharing.org
version: FAIRsharing.org: MTGD; Medicago truncatula Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.5yH3KC; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Names
More detailed information about this field from each metasource.
Medicago truncatula Genome Database
metasource: Fairsharing.orgversion: FAIRsharing.org: MTGD; Medicago truncatula Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.5yH3KC; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
MTGD
metasource: Fairsharing.orgversion: FAIRsharing.org: MTGD; Medicago truncatula Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.5yH3KC; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Names
More detailed information about this field from each metasource.
Medicago truncatula Genome Database
metasource: Fairsharing.orgversion: FAIRsharing.org: MTGD; Medicago truncatula Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.5yH3KC; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
MTGD
metasource: Fairsharing.orgversion: FAIRsharing.org: MTGD; Medicago truncatula Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.5yH3KC; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Medicago truncatula, a close relative of alfalfa, is a preeminent model for the study of the processes of nitrogen fixation, symbiosis, and legume genomics. J. Craig Venter Institute (JCVI; formerly TIGR) has been involved in M. truncatula genome sequencing and annotation since 2002 and has maintained a web-based resource providing data to the community for this entire period. This database stores the latest version of the genome, associated data and legacy project information together with a set of open-source tools.
Description
More detailed information about this field from each metasource.
Medicago truncatula, a close relative of alfalfa, is a preeminent model for the study of the processes of nitrogen fixation, symbiosis, and legume genomics. J. Craig Venter Institute (JCVI; formerly TIGR) has been involved in M. truncatula genome sequencing and annotation since 2002 and has maintained a web-based resource providing data to the community for this entire period. This database stores the latest version of the genome, associated data and legacy project information together with a set of open-source tools.
metasource: Fairsharing.orgversion: FAIRsharing.org: MTGD; Medicago truncatula Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.5yH3KC; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Webpage:
http://www.medicagogenome.orgWebpage
More detailed information about this field from each metasource.
http://www.medicagogenome.org
metasource: Fairsharing.orgversion: FAIRsharing.org: MTGD; Medicago truncatula Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.5yH3KC; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Publications:
Publications
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MTGD: The Medicago truncatula genome database
PMID: 25432968
metasource: Fairsharing.org
version: FAIRsharing.org: MTGD; Medicago truncatula Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.5yH3KC; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Publications
More detailed information about this field from each metasource.
MTGD: The Medicago truncatula genome database
PMID: 25432968
metasource: Fairsharing.org
version: FAIRsharing.org: MTGD; Medicago truncatula Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.5yH3KC; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
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MTGD: The Medicago truncatula genome database
PubMed citations: 35.
35 articles citing: MTGD: The Medicago truncatula genome database
HumanMine: advanced data searching, analysis and cross-species comparison. PMID:35820040
Genome-Wide Association Study Reveals Complex Genetic Architecture of Cadmium and Mercury Accumulation and Tolerance Traits in Medicago truncatula. PMID:35154199
The Candidate Photoperiod Gene MtFE Promotes Growth and Flowering in Medicago truncatula. PMID:33841463
Mucoromycotina Fungi Possess the Ability to Utilize Plant Sucrose as a Carbon Source: Evidence From Gongronella sp. w5. PMID:33584561
A functional genomics approach to dissect spotted alfalfa aphid resistance in Medicago truncatula. PMID:33335168
MaizeMine: A Data Mining Warehouse for the Maize Genetics and Genomics Database. PMID:33193550
Genome-wide study of C2H2 zinc finger gene family in Medicago truncatula. PMID:32867687
Pulse Crop Genetics for a Sustainable Future: Where We Are Now and Where We Should Be Heading. PMID:32431724
The negative regulator SMAX1 controls mycorrhizal symbiosis and strigolactone biosynthesis in rice. PMID:32355217
Plasticity of Phymatotrichopsis omnivora infection strategies is dependent on host and nonhost plant responses. PMID:31930733
The H3ABioNet helpdesk: an online bioinformatics resource, enhancing Africa's capacity for genomics research. PMID:31888443
A Bioinformatics Approach to Explore MicroRNAs as Tools to Bridge Pathways Between Plants and Animals. Is DNA Damage Response (DDR) a Potential Target Process? PMID:31850028
Molecular Basis of C-30 Product Regioselectivity of Legume Oxidases Involved in High-Value Triterpenoid Biosynthesis. PMID:31850023
Sugar transporters in Fabaceae, featuring SUT MST and SWEET families of the model plant Medicago truncatula and the agricultural crop Pisum sativum. PMID:31568488
KnowPulse: A Web-Resource Focused on Diversity Data for Pulse Crop Improvement. PMID:31428111
Genome sequence analysis of the fairy ring-forming fungus Lepista sordida and gene candidates for interaction with plants. PMID:30971747
Unified Transcriptomic Signature of Arbuscular Mycorrhiza Colonization in Roots of Medicago truncatula by Integration of Machine Learning, Promoter Analysis, and Direct Merging Meta-Analysis. PMID:30483277
BioGraph: a web application and a graph database for querying and analyzing bioinformatics resources. PMID:30458802
Translational genomics and multi-omics integrated approaches as a useful strategy for crop breeding. PMID:30353370
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. PMID:30239679
Medicago Plants Control Nodulation by Regulating Proteolysis of the Receptor-Like Kinase DMI2. PMID:29717018
Gene editing by CRISPR/Cas9 in the obligatory outcrossing Medicago sativa. PMID:29492697
The mycorrhiza-dependent defensin MtDefMd1 of Medicago truncatula acts during the late restructuring stages of arbuscule-containing cells. PMID:29370287
MGIS: managing banana (Musa spp.) genetic resources information and high-throughput genotyping data. PMID:29220435
SPL13 regulates shoot branching and flowering time in Medicago sativa. PMID:29149417
Heap: a highly sensitive and accurate SNP detection tool for low-coverage high-throughput sequencing data. PMID:28498906
Lotus Base: An integrated information portal for the model legume Lotus japonicus. PMID:28008948
Comparative transcriptome investigation of global gene expression changes caused by miR156 overexpression in Medicago sativa. PMID:27542359
Chado use case: storing genomic, genetic and breeding data of Rosaceae and Gossypium crops in Chado. PMID:26989146
Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing. PMID:26920390
Pleurochrysome: A Web Database of Pleurochrysis Transcripts and Orthologs Among Heterogeneous Algae. PMID:26746174
The power of single molecule real-time sequencing technology in the de novo assembly of a eukaryotic genome. PMID:26616024
Pre-announcement of symbiotic guests: transcriptional reprogramming by mycorrhizal lipochitooligosaccharides shows a strict co-dependency on the GRAS transcription factors NSP1 and RAM1. PMID:26597293
Hymenoptera Genome Database: integrating genome annotations in HymenopteraMine. PMID:26578564
Legume information system (LegumeInfo.org): a key component of a set of federated data resources for the legume family. PMID:26546515
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Tags
More detailed information about this field from each metasource.
genome annotation
metasource: Fairsharing.org
version: FAIRsharing.org: MTGD; Medicago truncatula Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.5yH3KC; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Tags
More detailed information about this field from each metasource.
genome annotation
metasource: Fairsharing.orgversion: FAIRsharing.org: MTGD; Medicago truncatula Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.5yH3KC; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
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