Search
Product
About us
Contact
Blog

GTEx Portal

The Genotype-Tissue Expression (GTEx) project is an ongoing effort to build a comprehensive public resource to study tissue-specific gene expression and regulation. Samples were collected from 53 non-diseased tissue sites across nearly 1000 individuals, primarily for molecular assays including WGS, WES, and RNA-Seq. Remaining samples are available from the GTEx Biobank. The GTEx Portal provides open access to data including gene expression, QTLs, and histology images.

Description

More detailed information about this field from each metasource.

The Genotype-Tissue Expression (GTEx) project is an ongoing effort to build a comprehensive public resource to study tissue-specific gene expression and regulation. Samples were collected from 53 non-diseased tissue sites across nearly 1000 individuals, primarily for molecular assays including WGS, WES, and RNA-Seq. Remaining samples are available from the GTEx Biobank. The GTEx Portal provides open access to data including gene expression, QTLs, and histology images.

metasource: Fairsharing.org
version: None

Webpage:

https://gtexportal.org

Webpage

More detailed information about this field from each metasource.

https://gtexportal.org

metasource: Fairsharing.org
version: None

Licence:

Name: GTEx Data Release and Publication Policy

Licence name

More detailed information about this field from each metasource.

GTEx Data Release and Publication Policy

metasource: Fairsharing.org
version: None

URL: https://gtexportal.org/home/documentationPage#staticTextPublicationPolicy

Licence URL

More detailed information about this field from each metasource.

https://gtexportal.org/home/documentationPage#staticTextPublicationPolicy

metasource: Fairsharing.org
version: None

Tags:

Tags
More detailed information about this field from each metasource.

gene expression
metasource: Fairsharing.org
version: None

histology
metasource: Fairsharing.org
version: None

quantitative trait loci
metasource: Fairsharing.org
version: None

rna sequencing
metasource: Fairsharing.org
version: None

regulation of gene expression
metasource: Fairsharing.org
version: None

whole genome sequencing
metasource: Fairsharing.org
version: None

gene expression histology quantitative trait loci rna sequence regulation of gene expression whole genome sequencing

More to explore:

1/20

GTEx

Genotype-Tissue Expression (GTEx) - database which helps to study the relationship between genetic variation and gene expression in human tissues.

TissGDB

Tissue-specific gene expression is critical in understanding biological processes, physiological conditions, and disease. The identification and appropriate use of tissue-specific genes (TissGenes) wi ...

Expression Atlas

The Expression Atlas is a free resource providing information on gene expression patterns under different biological conditions in a variety of species. Gene expression data is re-analysed in-house to ...

Regulation of Gene Expression Ontolology

An application ontology for the domain of gene expression regulation. The ontology integrates fragments of GO and MI with data from GOA, IntAct, UniProt, NCBI, and orthology relations using ontologica ...

Gene Expression Barcode

Gene expression data sorted into two groups: expressed and not expressed genes

MGI Mouse Gene Expression Database

The Gene Expression Database (GXD) is a community resource for gene expression information from the laboratory mouse. GXD stores and integrates different types of expression data and makes these data ...

Mouse Atlas of Gene Expression

<<<!!!<<< This repository is no longer available >>>!!!>>>

Allen Brain Atlas

Gene expression and neuroanatomical data.

eQTL Catalogue

The eQTL Catalogue aims to provide uniformly processed gene expression and splicing QTLs from all available public studies on human. Quantitative trait loci (QTL) are genomic variants that are signifi ...

Bgee DataBase for Gene Expression Evolution

Bgee is a database to retrieve and compare gene expression patterns in multiple animal species, produced from multiple data types (RNA-Seq, Affymetrix, in situ hybridization, and EST data). Bgee is ba ...

Chickspress

Chickspress is a gene expression database for chicken tissues. Chickspress incorporates both NCBI and Ensembl gene models and links these gene sets with experimental gene expression data and QTL infor ...

e-Mouse Atlas of Gene Expression

The e-Mouse Atlas of Gene Expression (EMAGE) is a freely available database of in situ gene expression patterns that allows users to perform online queries of mouse developmental gene expression. EMAG ...

Quantitative Trait Loci Archive

This site provides access to raw data from various QTL (quantitative trait loci) studies using rodent inbred line crosses. Data are available in the .csv format used by R/qtl and pseudomarker programs ...

AOE

AOE (All Of gene Expression) - an integrated index for public gene expression databases.

PAZAR

PAZAR is a software framework for the construction and maintenance of regulatory sequence data annotations; a framework which allows multiple boutique databases to function independently within a larg ...

Gene Expression Omnibus

The Gene Expression Omnibus (GEO) is a public repository that archives and freely distributes microarray, next-generation sequencing, and other forms of high-throughput functional genomic data submitt ...

PROkariotIC Database Of Gene-Regulation

PRODORIC is a comprehensive database about gene regulation and gene expression in prokaryotes. It includes a manually curated and unique collection of transcription factor binding sites.

Gene Expression Ontology

An application ontology for the domain of gene expression. The ontology integrates fragments of GO and MI with data from GOA, IntAct, UniProt, NCBI, and orthology relations using ontological propertie ...

Interferome

This database enables the reliable identification of an individual Interferon Regulated Gene (IRG) or IRG signatures from high-throughput data sets (i.e. microarray, proteomic data etc.). It also assi ...

Animal Quantitative Trait Loci (QTL) Database

The Animal Quantitative Trait Loci (QTL) Database (Animal QTLdb) strives to collect all publicly available trait mapping data, i.e. QTL (phenotype/expression, eQTL), candidate gene and association dat ...

Previous Next

Need help integrating and/or managing biomedical data?

Follow our Twitter for updates

Service status

Reach us:
[email protected]

Data is amalgamated and only retrieved periodically.
Some of the resources used by the system:

® FAIRsharing.org
® Bioontology/Bioportal Terms
® Nucleic Acid Research - Database
® re3data.org
® bio.tools
® PubMed - Courtesy of the U.S. National Library of Medicine