Other names: cpgmotifs
CpGmotifs is a tool to discover DNA motifs associated to CpG methylation events.
transcription factors and regulatory sites epigenetics imaging methylated dna immunoprecipitation chip-seq
A comprehensive database for decoding the regulatory transcription co-factors in human and mouse.
The database contains information about the occurrence of methylated cytosines in the DNA.
We developed a method, ChIP-sequencing (ChIP-seq), combining chromatin immunoprecipitation (ChIP) and massively parallel sequencing to identify mammalian DNA sequences bound by transcription factors i ...
Next-generation sequencing single-cytosine-resolution DNA methylation data
Haloarchaeal genomes database.
ChIP-seq-based database of human transcription factor binding sites and the topological arrangements of the proteins bound to them.
Database which collects human and mouse embryonic stem cell related datasets. These datasets cover perturbation (both knock-down and overexpression) and chromatin immunoprecipitation (ChIP) experiment ...
A comprehensive database for regulations of human transcription factors and their targets. Transcription factors (TFs) as key regulators could modulate the expression of target genes by binding to sp ...
A PROkaryotic Chromatin ImmunoPrecipitation DataBase
Allele-Specific DNA Methylation Databases (ASMdb) is a comprehensive database for allele-specific DNA methylation in diverse organisms. ASMdb is aiming to provide a comprehensive resource and a web to ...
This resource details DNA methylation profiles in human and mouse brain. This database includes genome-wide DNA methylation profiles for human and mouse brains. The DNA methylation profiles were gener ...
Database to discover the regulate relationships in the context of enhancers.
A manually curated resource for multi-omics level evidence integration of fibrosis research
Human Assay-for-Transposase-Accessible Chromatin data
Curated database to annotate gene promoters identified from ChIP-seq results. Users can search the database based on gene id/symbol, or by specific tissue/cell type and filter results based on any com ...
Database of genetic variations associated with long noncoding genes.
An Integrated Correlation Network Database for the Identification of CeRNA Axes in Uveal Melanoma.
DNMIVD is a comprehensive annotation and interactive visualization database for DNA methylation profile of diverse human cancer constructed with high throughput microarray data from TCGA and GEO datab ...
Database of zinc binding sites.
CancerCRCdb is a comprehensive database of human core regulatory circuitry.