Other names: fibroad
A manually curated resource for multi-omics level evidence integration of fibrosis research
rna sequence methylated dna immunoprecipitation pathology chip-seq proteomics
We developed a method, ChIP-sequencing (ChIP-seq), combining chromatin immunoprecipitation (ChIP) and massively parallel sequencing to identify mammalian DNA sequences bound by transcription factors i ...
The database contains information about the occurrence of methylated cytosines in the DNA.
A comprehensive database for decoding the regulatory transcription co-factors in human and mouse.
CpGmotifs is a tool to discover DNA motifs associated to CpG methylation events.
MVIP provides a large number of available multi-omics data under viral infection in various species.
Allele-Specific DNA Methylation Databases (ASMdb) is a comprehensive database for allele-specific DNA methylation in diverse organisms. ASMdb is aiming to provide a comprehensive resource and a web to ...
A database of enhancer mediated feed-forward loops for human and mouse.
ChIPBase v2.0 is an open database for studying the transcription factor binding sites and motifs, and decoding the transcriptional regulatory networks of lncRNAs, miRNAs, other ncRNAs and protein-codi ...
A Comprehensive Multi-Omics Association Database of Secondary Growth in Response to Stress in Populus trichocarpa.
FerrDb is a manually curated resource for regulators and markers of ferroptosis and ferroptosis-disease associations.
One-stop and comprehensive annotation system for individual cancer genome at multi-omics level.
EpiMOLAS (Epi-genoMics OnLine Analysis System) is an intuitive web-based framework for genome-wide DNA methylation analysis.
PlanExp is an intuitive integration of complex RNA-seq datasets with planarian omics resources.
We have created a Multi-Omics Metadata checklist to ensure consistent data quality and comprehensive meta-data. We used previously developed data submission policies for PRIDE and GEO as starting poin ...
Database which collects human and mouse embryonic stem cell related datasets. These datasets cover perturbation (both knock-down and overexpression) and chromatin immunoprecipitation (ChIP) experiment ...
ChIP-seq-based database of human transcription factor binding sites and the topological arrangements of the proteins bound to them.
A PROkaryotic Chromatin ImmunoPrecipitation DataBase
A manually curated database of polycystic ovarian syndrome. Nor Afiqah-Aleng, Sarahani Harun, Mohd Rusman Arief A-Rahman, Nor Azlan Nor Muhammad, Zeti-Azura Mohamed-Hussein, PCOSBase: a manually cura ...
Buffalo Subclinical Mastitis Methylome–Transcriptome database (BSCM2TDb) is a three-tier architecture-based relational database in Water Buffalo.
The Signaling Pathways Project is an integrated 'omics knowledgebase based upon public, manually curated transcriptomic and cistromic (ChIP-Seq) datasets involving genetic and small molecule manipulat ...