hTFtarget

EnhancerDB

Database to discover the regulate relationships in the context of enhancers.

PancanQTL

lncRNASNP2

The Arabidopsis Gene Regulatory Information Server

The Arabidopsis Gene Regulatory Information Server (AGRIS) is a new information resource of Arabidopsis promoter sequences, transcription factors and their target genes. AGRIS currently contains two d ...

TcoF-DB

Database for Human Transcription Co-Factors

T1TAdb

T1TAdb is a database of Type I Toxin-Antitoxin systems.

LncVar

Database of genetic variations associated with long noncoding genes.

TriplexRNA

Database of cooperating miRNAs and their mutual targets which enables researchers explore novel patterns in gene regulation.

TCRdb

T-cell receptor (TCR) sequences

EVAtlas

Database for ncRNA expression in human extracellular vesicles.

TargetGeneReg

A comprehensive web-atlas for p53, p63, and cell cycle-dependent gene regulation.

ChIPSummitDB

ChIP-seq-based database of human transcription factor binding sites and the topological arrangements of the proteins bound to them.

miRFFLDB

An integrated resource for human miRNA-Transcription Factor-Target Gene coregulatory networks and associated Feed Forward Loops. Defence Institute of Physiology and Allied Science. miRNA and Transcr ...

EnhFFL

A database of enhancer mediated feed-forward loops for human and mouse.

Transcription Factor Class

TFClass is a resource that classifies eukaryotic transcription factors (TFs) according to their DNA-binding domains. Combining information from different resources, manually checking the retrieved mam ...

FlyTF

FlyTF (v2) is a manually curated catalogue of Drosophila site-specific transcription factors (TFs). It integrates proteins identified as DNA-binding TFs by computational prediction based on structural ...

PmiRtarbase

A positive miRNA-target regulations database.

Yeast Searching for Transcriptional Regulators and Consensus Tracking

YEASTRACT (Yeast Search for Transcriptional Regulators And Consensus Tracking) is a curated repository of more than 48333 regulatory associations between transcription factors (TF) and target genes in ...

LNCediting

RNA editing sites in lncRNAs from human, monkey, mouse and fly