Ashbya Genome Database

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Ashbya Genome Database

metasource: Fairsharing.org
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AGD

metasource: Fairsharing.org
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Other names: AGD

The Ashbya Genome Database (AGD) is a genome/transcriptome database containing gene annotation and high-density oligonucleotide microarray expression data for protein-coding genes from Ashbya gossypii and the model organism Saccharomyces cerevisiae.

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Publications

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Ashbya Genome Database 3.0: a cross-species genome and transcriptome browser for yeast biologists
PMID: 17212814

metasource: Fairsharing.org
version: None

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The Ashbya Genome Database (AGD)--a tool for the yeast community and genome biologists
PMID: 15608214

metasource: Fairsharing.org
version: None

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• Ashbya Genome Database 3.0: a cross-species genome and transcriptome browser for yeast biologists PubMed citations: 19.

  19 articles citing: Ashbya Genome Database 3.0: a cross-species genome and transcriptome browser for yeast biologists

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  Metabolic engineering of Ashbya gossypii for limonene production from xylose. PMID:35841062

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  Role of RIM101 for Sporulation at Alkaline pH in Ashbya gossypii. PMID:34209071

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  A case of convergent-gene interference in the budding yeast knockout library causing chromosome instability. PMID:33724427

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  Sporulation in Ashbya gossypii. PMID:32872517

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  Utilization of xylose by engineered strains of Ashbya gossypii for the production of microbial oils. PMID:28053663

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  Bioproduction of riboflavin: a bright yellow history. PMID:27696023

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  Metabolic engineering of riboflavin production in Ashbya gossypii through pathway optimization. PMID:26463172

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  Engineering Ashbya gossypii for efficient biolipid production. PMID:25625436

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  Investigation of protein secretion and secretion stress in Ashbya gossypii. PMID:25523110

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  Genome-wide metabolic re-annotation of Ashbya gossypii: new insights into its metabolism through a comparative analysis with Saccharomyces cerevisiae and Kluyveromyces lactis. PMID:25253284

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  Molecular and functional characterization of an invertase secreted by Ashbya gossypii. PMID:24452331

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  Active transposition in genomes. PMID:23145912

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  Alternative splicing regulates targeting of malate dehydrogenase in Yarrowia lipolytica. PMID:22368181

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  Regulation of exit from mitosis in multinucleate Ashbya gossypii cells relies on a minimal network of genes. PMID:21737675

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  Structural mutants of the spindle pole body cause distinct alteration of cytoplasmic microtubules and nuclear dynamics in multinucleated hyphae. PMID:20053682

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  Combined phylogeny and neighborhood analysis of the evolution of the ABC transporters conferring multiple drug resistance in hemiascomycete yeasts. PMID:19796374

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  Functional annotations for the Saccharomyces cerevisiae genome: the knowns and the known unknowns. PMID:19577472

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  Phosphoribosyl pyrophosphate synthetase activity affects growth and riboflavin production in Ashbya gossypii. PMID:18782443

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  A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. PMID:17623057
• The Ashbya Genome Database (AGD)--a tool for the yeast community and genome biologists PubMed citations: 6.

  6 articles citing: The Ashbya Genome Database (AGD)--a tool for the yeast community and genome biologists

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  The NHR1-1 of Prs1 and the pentameric motif 284KKCPK288 of Prs3 permit multi-functionality of the PRPP synthetase in Saccharomyces cerevisiae. PMID:30649305

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  Genome-wide computational prediction of tandem gene arrays: application in yeasts. PMID:20092627

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  Fusion and fission of genes define a metric between fungal genomes. PMID:18949021

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  Dandruff-associated Malassezia genomes reveal convergent and divergent virulence traits shared with plant and human fungal pathogens. PMID:18000048

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  Ashbya Genome Database 3.0: a cross-species genome and transcriptome browser for yeast biologists. PMID:17212814

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  The SH3/PH domain protein AgBoi1/2 collaborates with the Rho-type GTPase AgRho3 to prevent nonpolar growth at hyphal tips of Ashbya gossypii. PMID:16950929

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genome annotation

metasource: Fairsharing.org
version: None

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genome visualization

metasource: Fairsharing.org
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microarray experiment

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genome annotation genome visualization microarray experiment