GermOnline
Names
More detailed information about this field from each metasource.
GermOnline
metasource: Fairsharing.org
version: FAIRsharing.org: GermOnline; GermOnline; DOI: https://doi.org/10.25504/FAIRsharing.vk3v6s; Last edited: April 26, 2021, 9:33 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: re3data.org
version: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
Gametogenesis and reproductive tissue expression
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:12.762833
germonline
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:12.762833
Names
More detailed information about this field from each metasource.
GermOnline
metasource: Fairsharing.orgversion: FAIRsharing.org: GermOnline; GermOnline; DOI: https://doi.org/10.25504/FAIRsharing.vk3v6s; Last edited: April 26, 2021, 9:33 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: re3data.org
version: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
Gametogenesis and reproductive tissue expression
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:12.762833
germonline
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:12.762833
Other names: Gametogenesis and reproductive tissue expression, germonline
Names
More detailed information about this field from each metasource.
GermOnline
metasource: Fairsharing.orgversion: FAIRsharing.org: GermOnline; GermOnline; DOI: https://doi.org/10.25504/FAIRsharing.vk3v6s; Last edited: April 26, 2021, 9:33 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: re3data.org
version: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
Gametogenesis and reproductive tissue expression
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:12.762833
germonline
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:12.762833
GermOnline is a cross-species database gateway focusing on high-throughput expression data relevant for germline development, the meiotic cell cycle and mitosis in healthy versus malignant cells. The portal provides access to the Saccharomyces Genomics Viewer (SGV) which facilitates online interpretation of complex data from experiments with high-density oligonucleotide tiling microarrays that cover the entire yeast genome.
Description
More detailed information about this field from each metasource.
GermOnline is a cross-species database gateway focusing on high-throughput expression data relevant for germline development, the meiotic cell cycle and mitosis in healthy versus malignant cells. The portal provides access to the Saccharomyces Genomics Viewer (SGV) which facilitates online interpretation of complex data from experiments with high-density oligonucleotide tiling microarrays that cover the entire yeast genome.
metasource: Fairsharing.orgversion: FAIRsharing.org: GermOnline; GermOnline; DOI: https://doi.org/10.25504/FAIRsharing.vk3v6s; Last edited: April 26, 2021, 9:33 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
GermOnline is a subject oriented cross-species community annotation knowledgebase that provides access to microarray expression data from experiments relevant for the mitotic and meiotic cell cycle as well as gametogenesis in yeast and higher eukaryotes. Moreover, GermOnline integrates knowledge about genes important for meiosis, gametogenesis and fertility that is provided and updated by members of the scientific community in collaboration with professional curators.
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
GermOnline 4.0 is a cross-species database gateway focusing on high-throughput expression data relevant for germline development, the meiotic cell cycle and mitosis in healthy versus malignant cells. The portal provides access to the Saccharomyces Genomics Viewer (SGV) which facilitates online interpretation of complex data from experiments with high-density oligonucleotide tiling microarrays that cover the entire yeast genome.
metasource: re3data.orgversion: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
High-throughput expression data relevant for germline development and fertility across species.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:12.762833
Webpage:
http://www.germonline.org/index.htmlWebpage
More detailed information about this field from each metasource.
http://www.germonline.org/index.html
metasource: Fairsharing.orgversion: FAIRsharing.org: GermOnline; GermOnline; DOI: https://doi.org/10.25504/FAIRsharing.vk3v6s; Last edited: April 26, 2021, 9:33 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: re3data.org
version: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
http://www.germonline.org/
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:12.762833
Licence:
Name: CCLicence name
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CC
metasource: re3data.orgversion: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
Licence URL
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https://creativecommons.org/licenses/by-sa/3.0/
metasource: re3data.orgversion: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
Publications:
Publications
More detailed information about this field from each metasource.
GermOnline 4.0 is a genomics gateway for germline development, meiosis and the mitotic cell cycle
PMID: 21149299
metasource: Fairsharing.org
version: FAIRsharing.org: GermOnline; GermOnline; DOI: https://doi.org/10.25504/FAIRsharing.vk3v6s; Last edited: April 26, 2021, 9:33 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
http://dx.doi.org/10.1093/database/baq030
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:12.762833
Publications
More detailed information about this field from each metasource.
GermOnline 4.0 is a genomics gateway for germline development, meiosis and the mitotic cell cycle
PMID: 21149299
metasource: Fairsharing.org
version: FAIRsharing.org: GermOnline; GermOnline; DOI: https://doi.org/10.25504/FAIRsharing.vk3v6s; Last edited: April 26, 2021, 9:33 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
http://dx.doi.org/10.1093/database/baq030
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:12.762833
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GermOnline 4.0 is a genomics gateway for germline development, meiosis and the mitotic cell cycle
PubMed citations: 21.
21 articles citing: GermOnline 4.0 is a genomics gateway for germline development, meiosis and the mitotic cell cycle
MeiosisOnline: A Manually Curated Database for Tracking and Predicting Genes Associated With Meiosis. PMID:34485275
Combined RNA/tissue profiling identifies novel Cancer/testis genes. PMID:33426787
EXOSC10/Rrp6 is post-translationally regulated in male germ cells and controls the onset of spermatogenesis. PMID:29118343
The BioGRID interaction database: 2017 update. PMID:27980099
Ndt80 activates the meiotic ORC1 transcript isoform and SMA2 via a bi-directional middle sporulation element in Saccharomyces cerevisiae. PMID:27362276
Cold/menthol TRPM8 receptors initiate the cold-shock response and protect germ cells from cold-shock-induced oxidation. PMID:27317670
Meiotic chromosome mobility in fission yeast is resistant to environmental stress. PMID:27074839
Global alterations of the transcriptional landscape during yeast growth and development in the absence of Ume6-dependent chromatin modification. PMID:25957495
The BioMart community portal: an innovative alternative to large, centralized data repositories. PMID:25897122
The ReproGenomics Viewer: an integrative cross-species toolbox for the reproductive science community. PMID:25883147
Integrated RNA- and protein profiling of fermentation and respiration in diploid budding yeast provides insight into nutrient control of cell growth and development. PMID:25662576
MeioBase: a comprehensive database for meiosis. PMID:25566299
The BioGRID interaction database: 2015 update. PMID:25428363
Decreased expression of genes associated with memory and x-linked mental retardation in boys with non-syndromic cryptorchidism and high infertility risk. PMID:24715854
Bioinformatics for spermatogenesis: annotation of male reproduction based on proteomics. PMID:23852026
The BioGRID interaction database: 2013 update. PMID:23203989
SpermatogenesisOnline 1.0: a resource for spermatogenesis based on manual literature curation and genome-wide data mining. PMID:23193286
The Glucocorticoid-induced leucine zipper (GILZ) Is essential for spermatogonial survival and spermatogenesis. PMID:22571926
BioMart Central Portal: an open database network for the biological community. PMID:21930507
BioMart: a data federation framework for large collaborative projects. PMID:21930506
Profiling spermatogenic failure in adult testes bearing Sox9-deficient Sertoli cells identifies genes involved in feminization, inflammation and stress. PMID:21182756 - http://dx.doi.org/10.1093/database/baq030
Tags:
Tags
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gene
metasource: Fairsharing.org
version: FAIRsharing.org: GermOnline; GermOnline; DOI: https://doi.org/10.25504/FAIRsharing.vk3v6s; Last edited: April 26, 2021, 9:33 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
meiosis i
metasource: Fairsharing.org
version: FAIRsharing.org: GermOnline; GermOnline; DOI: https://doi.org/10.25504/FAIRsharing.vk3v6s; Last edited: April 26, 2021, 9:33 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
meiosis ii
metasource: Fairsharing.org
version: FAIRsharing.org: GermOnline; GermOnline; DOI: https://doi.org/10.25504/FAIRsharing.vk3v6s; Last edited: April 26, 2021, 9:33 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
genomics databases (non-vertebrate)
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
fungal genome databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
microarray data and other gene expression databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
genechips
metasource: re3data.org
version: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
comparative genomics
metasource: re3data.org
version: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
gametogenesis
metasource: re3data.org
version: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
germ line development
metasource: re3data.org
version: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
human reproductive health
metasource: re3data.org
version: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
meiosis
metasource: re3data.org
version: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
microarray
metasource: re3data.org
version: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
mitotic cell division
metasource: re3data.org
version: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
gene and protein families
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:12.762833
Tags
More detailed information about this field from each metasource.
gene
metasource: Fairsharing.orgversion: FAIRsharing.org: GermOnline; GermOnline; DOI: https://doi.org/10.25504/FAIRsharing.vk3v6s; Last edited: April 26, 2021, 9:33 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
meiosis i
metasource: Fairsharing.orgversion: FAIRsharing.org: GermOnline; GermOnline; DOI: https://doi.org/10.25504/FAIRsharing.vk3v6s; Last edited: April 26, 2021, 9:33 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
meiosis ii
metasource: Fairsharing.orgversion: FAIRsharing.org: GermOnline; GermOnline; DOI: https://doi.org/10.25504/FAIRsharing.vk3v6s; Last edited: April 26, 2021, 9:33 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
genomics databases (non-vertebrate)
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
fungal genome databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
microarray data and other gene expression databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
genechips
metasource: re3data.orgversion: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
comparative genomics
metasource: re3data.orgversion: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
gametogenesis
metasource: re3data.orgversion: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
germ line development
metasource: re3data.orgversion: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
human reproductive health
metasource: re3data.orgversion: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
meiosis
metasource: re3data.orgversion: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
microarray
metasource: re3data.orgversion: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
mitotic cell division
metasource: re3data.orgversion: re3data.org: GermOnline; editing status 2021-05-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R37K5Q last accessed: 2022-11-04
gene and protein families
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:12.762833
gene meiosis i meiosis ii genomics fungal genome microarray data and other gene expression genechips comparative genomics gametogenesis germ line development human reproductive health meiosis microarray mitotic cell division gene and protein families
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