alkaligrass

A high-quality genome sequence of alkaligrass provides insights into halophyte stress tolerance. A high-quality chromosome-level genome sequence of alkaligrass assembled from Illumina, PacBio and 10× Genomics reads combined with genome-wide chromosome conformation capture (Hi-C) data. The ∼1.50 Gb assembled alkaligrass genome encodes 38,387 protein-coding genes, and 54.9% of the assembly are transposable elements, with long terminal repeats being the most abundant. Comparative genomic analysis coupled with stress-treated transcriptome profiling uncovers a set of unique saline- and alkaline-responsive genes in alkaligrass

Webpage:

Publications:

Publications

More detailed information about this field from each metasource. ×

A high-quality genome sequence of alkaligrass provides insights into halophyte stress tolerance
PMID: 32180108

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:57.299539

Close

• A high-quality genome sequence of alkaligrass provides insights into halophyte stress tolerance PubMed citations: 5.

  5 articles citing: A high-quality genome sequence of alkaligrass provides insights into halophyte stress tolerance

  ×

  Chromosomal genome and population genetic analyses to reveal genetic architecture, breeding history and genes related to cadmium accumulation in Lentinula edodes. PMID:35144543

  ---

  Phylotranscriptomics Resolves the Phylogeny of Pooideae and Uncovers Factors for Their Adaptive Evolution. PMID:35134207

  ---

  Selection and Validation of Reference Genes for RT-qPCR Analysis in Spinacia oleracea under Abiotic Stress. PMID:33623781

  ---

  Comparative transcriptome analysis of two rice genotypes differing in their tolerance to saline-alkaline stress. PMID:33259539

  ---

  Uncertainty in using chest computed tomography in early coronavirus disease (COVID-19). PMID:32240519

Tags:

Tags

More detailed information about this field from each metasource. ×

sequence assembly

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:57.299539

---

phylogenetics

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:57.299539

---

transcription factors and regulatory sites

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:57.299539

---

transcriptomics

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:57.299539

---

rna-seq

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:57.299539

Close

sequence assembly phylogenetics transcription factors and regulatory sites transcriptomics rna sequence