Other names: devomics
Integrated multi-omics database of human and mouse early embryo.
epigenomics transcriptomics rna sequence transcription factors and regulatory sites chromosome conformation capture
A dbEmbryo multi-omics database for analyses of synergistic regulation in early mammalian embryo development.
EpiRegio is a resource of Regulatory EleMents (REMs) associated to protein coding, and non-protein coding genes. For a detailed documentation, please read our documentation.
CancerCRCdb is a comprehensive database of human core regulatory circuitry.
An integrated multi-omics database of barley gene families.
A gene Expression Browser for RNA-seq, de novo transcriptome assembly and flavonoid gene analysis in 13 wild and cultivated berry fruit species with high content of phenolics.
Regeneration Roadmap aims to compile large datasets for gene expression and regulation created by a broad spectrum of high-throughput omics technologies. This one-stop service provides user-friendly f ...
A comprehensive database for decoding the regulatory transcription co-factors in human and mouse.
Here, we have predicted CasRx guide efficiency for all human and mouse RefSeq genes. We have also enabled custom sequence input for CasRx guide design.
Enhancers are a class of cis-regulatory elements that can increase gene transcription by forming loops in intergenic regions, introns and exons. Enhancers, as well as their associated target genes, an ...
Annotated reference dataset for transcriptional start sites (TSS) in human and mouse.
A comprehensive database for regulations of human transcription factors and their targets. Transcription factors (TFs) as key regulators could modulate the expression of target genes by binding to sp ...
A database of gene expression patterns in the Drosophila terminalia. An Atlas of Transcription Factors Expressed in Male Pupal Terminalia of Drosophila melanogaster.
ChIP-seq-based database of human transcription factor binding sites and the topological arrangements of the proteins bound to them.
Manually curated 3C (Chromosome conformation capture) database.
3DSNP is a database for comprehensively annotating the regulatory function of human noncoding SNPs by exploring their 3D interactions with genes and genetically associated SNPs mediated by chromatin l ...
A database of enhancer mediated feed-forward loops for human and mouse.
Human Assay-for-Transposase-Accessible Chromatin data
A high-quality genome sequence of alkaligrass provides insights into halophyte stress tolerance. A high-quality chromosome-level genome sequence of alkaligrass assembled from Illumina, PacBio and 10× ...
CATA (The chromatin accessibility of cancer database) is a comprehensive Cancer ATAC-seq database that aim to provided a large number of available resources on cancer ATAC-seq datas. The database was ...