VectorDB

Data available for download from the SGD site, be aware that data dates from 1997

Description

More detailed information about this field from each metasource.

Data available for download from the SGD site, be aware that data dates from 1997

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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More detailed information about this field from each metasource.

nucleotide sequence databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

coding and non-coding dna

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

SINEBase

A database of short interspersed elements (SINEs)

GISSD

Group I Intron Sequence and Structure Database

L1Base

Functional annotation and prediction of LINE-1 elements

UCNEbase

A database of ultraconserved non-coding elements and gene regulatory blocks

MethSMRT

DNA methylation data from single molecule, real-time sequencing

DoriC

DoriC regions in bacterial and archaeal genomes

UTRome

3'UTRs and their functional elements in C. elegans

TranspoGene

Transposed elements influence on the transcriptome of seven vertebrates and invertebrates

UgMicroSatdb

UniGene MicroSatellite database: short tandem repeats from various eukaryotic genomes

Plant repeat database

Repetitive sequences in plant genomes

Ciliate IES-MDS database

Macro- and micronuclear genes in spirotrichous ciliates

NPRD - Nucleosome Positioning Region Database

Nucleosome positioning region database

Saccharomyces Genome Database

The Saccharomyces Genome Database (SGD) provides comprehensive integrated biological information for the budding yeast Saccharomyces cerevisiae along with search and analysis tools to explore these da ...

SNPSTR

The SNPSTR database contains the SNP-STR/microsatellite compound markers in the five model species, where sufficient SNP information exists in both of the NCBI and Ensembl databases. These species are ...

CORG - A database for COmparative Regulatory Genomics

Sequence conservation in non-coding, upstream regions of orthologous genes from man and mouse is likely to reflect common regulatory DNA sites. Motivated by this assumption we have delineated a catalo ...

VECTOR

An Integrated Correlation Network Database for the Identification of CeRNA Axes in Uveal Melanoma.

Synthetic Gene Database

The Synthetic Gene Database (http://www.evolvingcode.net/codon/sgdb/index.php) is a resource that has collected together sequence information on synthetic genes (i.e. genes that were designed conceptu ...

TIGR Plant Transcript Assembly database

The TIGR Plant Transcript Assemblies (TA) database (http://plantta.tigr.org) uses expressed sequences collected from the NCBI GenBank Nucleotide database for the construction of transcript assemblies. ...

Tandem Repeats Database

Tandem Repeats Database (TRDB) is a public repository of information on tandem repeats in genomic DNA and contains a variety of tools for their analysis.

CEGA

CEGA, (Conserved Elements from Genomic Alignments), is a database of conserved vertebrate elements. This database provides acces to precomputed sets of conserved sequences from different species and a ...

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SINEBase

GISSD

L1Base

UCNEbase

MethSMRT

DoriC

UTRome

TranspoGene

UgMicroSatdb

Plant repeat database

Ciliate IES-MDS database

NPRD - Nucleosome Positioning Region Database

Saccharomyces Genome Database

SNPSTR

CORG - A database for COmparative Regulatory Genomics

VECTOR

Synthetic Gene Database

TIGR Plant Transcript Assembly database

Tandem Repeats Database

CEGA