A database of ultraconserved non-coding elements and gene regulatory blocks
nucleic acid sequence coding and non-coding dna
A database of short interspersed elements (SINEs)
Regulatory SNPs affecting predicted transcription factor binding sites
Transcription factor binding site sequences obtained using high-throughput SELEX method
Functional annotation and prediction of LINE-1 elements
Group I Intron Sequence and Structure Database
3'UTRs and their functional elements in C. elegans
DoriC regions in bacterial and archaeal genomes
Transposed elements influence on the transcriptome of seven vertebrates and invertebrates
DNA methylation data from single molecule, real-time sequencing
Repetitive sequences in plant genomes
UniGene MicroSatellite database: short tandem repeats from various eukaryotic genomes
Data available for download from the SGD site, be aware that data dates from 1997
Macro- and micronuclear genes in spirotrichous ciliates
Sequence conservation in non-coding, upstream regions of orthologous genes from man and mouse is likely to reflect common regulatory DNA sites. Motivated by this assumption we have delineated a catalo ...
Nucleosome positioning region database
Coding and non-coding RNA
The SNPSTR database contains the SNP-STR/microsatellite compound markers in the five model species, where sufficient SNP information exists in both of the NCBI and Ensembl databases. These species are ...
The Mass Genome Annotation (MGA) Data Repository stores published next generation sequencing data and other genome annotation data (such as gene start sites, SNPs, etc.) that, in conjunction with the ...
The Synthetic Gene Database (http://www.evolvingcode.net/codon/sgdb/index.php) is a resource that has collected together sequence information on synthetic genes (i.e. genes that were designed conceptu ...
CEGA, (Conserved Elements from Genomic Alignments), is a database of conserved vertebrate elements. This database provides acces to precomputed sets of conserved sequences from different species and a ...