Genome-Wide Classification and Evolutionary Analysis Reveal Diverged Patterns of Chalcone Isomerase in Plants.
PMID:35883518
Advances in understanding Norway spruce natural resistance to needle bladder rust infection: transcriptional and secondary metabolites profiling.
PMID:35692040
DUF1005 Family Identification, Evolution Analysis in Plants, and Primary Root Elongation Regulation of CiDUF1005 From Caragana intermedia.
PMID:35422842
miR160 Interacts in vivo With Pinus pinaster AUXIN RESPONSE FACTOR 18 Target Site and Negatively Regulates Its Expression During Conifer Somatic Embryo Development.
PMID:35371172
Transcriptomic changes during the establishment of long-term methyl jasmonate-induced resistance in Norway spruce.
PMID:35348221
Populus SVL Acts in Leaves to Modulate the Timing of Growth Cessation and Bud Set.
PMID:35251092
pHBMT1, a BAHD-family monolignol acyltransferase, mediates lignin acylation in poplar.
PMID:34977949
Evolution of chlorophyll degradation is associated with plant transition to land.
PMID:34931727
qtlXplorer: an online systems genetics browser in the Eucalyptus Genome Integrative Explorer (EucGenIE).
PMID:34911434
Centromere-Specific Retrotransposons and Very-Long-Chain Fatty Acid Biosynthesis in the Genome of Yellowhorn (Xanthoceras sorbifolium, Sapindaceae), an Oil-Producing Tree With Significant Drought Resistance.
PMID:34880890
Genetic diversity of Norway spruce ecotypes assessed by GBS-derived SNPs.
PMID:34848793
Genome-Wide Identification, Characterization and Expression Analysis of Soybean CHYR Gene Family.
PMID:34830077
Phenoloxidases in Plants-How Structural Diversity Enables Functional Specificity.
PMID:34659324
Genome-wide investigation and expression profiling of polyphenol oxidase (PPO) family genes uncover likely functions in organ development and stress responses in Populus trichocarpa.
PMID:34625025
Lipid Body Dynamics in Shoot Meristems: Production, Enlargement, and Putative Organellar Interactions and Plasmodesmal Targeting.
PMID:34367200
Overexpression of SHORT VEGETATIVE PHASE-LIKE (SVL) in Populus delays onset and reduces abundance of flowering in field-grown trees.
PMID:34333535
In silico characterization of putative gene homologues involved in somatic embryogenesis suggests that some conifer species may lack LEC2, one of the key regulators of initiation of the process.
PMID:34039265
Genome-Wide Investigation of the NF-X1 Gene Family in Populus trichocarpa Expression Profiles during Development and Stress.
PMID:33925110
Predictive Models of Genetic Redundancy in Arabidopsis thaliana.
PMID:33871641
Cytokinin glucosyl transferases, key regulators of cytokinin homeostasis, have potential value for wheat improvement.
PMID:33811433
A Pipeline for Non-model Organisms for de novo Transcriptome Assembly, Annotation, and Gene Ontology Analysis Using Open Tools: Case Study with Scots Pine.
PMID:33732799
Genome-wide analysis of UGDH genes in Populus trichocarpa and responsiveness to nitrogen treatment.
PMID:33732570
Organic nitrogen nutrition: LHT1.2 protein from hybrid aspen (Populus tremula L. x tremuloides Michx) is a functional amino acid transporter and a homolog of Arabidopsis LHT1.
PMID:33631788
EARLY BUD-BREAK 1 and EARLY BUD-BREAK 3 control resumption of poplar growth after winter dormancy.
PMID:33602938
Comparative Fungal Community Analyses Using Metatranscriptomics and Internal Transcribed Spacer Amplicon Sequencing from Norway Spruce.
PMID:33594001
Early transcriptional response to gravistimulation in poplar without phototropic confounding factors.
PMID:33542802
Molecular signatures of local adaptation to light in Norway spruce.
PMID:33511433
Using Gene Expression to Study Specialized Metabolism-A Practical Guide.
PMID:33510763
Candidate regulators and target genes of drought stress in needles and roots of Norway spruce.
PMID:33416078
Genome-Wide Identification of Populus Malectin/Malectin-Like Domain-Containing Proteins and Expression Analyses Reveal Novel Candidates for Signaling and Regulation of Wood Development.
PMID:33414796
Origin and evolution of a gibberellin-deactivating enzyme GAMT.
PMID:33376939
Stem girdling affects the onset of autumn senescence in aspen in interaction with metabolic signals.
PMID:33368469
Comprehensive characterization of the ALMT and MATE families on Populus trichocarpa and gene co-expression network analysis of its members during aluminium toxicity and phosphate starvation stresses.
PMID:33214973
Leaf shape in Populus tremula is a complex, omnigenic trait.
PMID:33209260
Predicting and clustering plant CLE genes with a new method developed specifically for short amino acid sequences.
PMID:33045986
High-Temperature-Responsive Poplar lncRNAs Modulate Target Gene Expression via RNA Interference and Act as RNA Scaffolds to Enhance Heat Tolerance.
PMID:32948072
Hunting monolignol transporters: membrane proteomics and biochemical transport assays with membrane vesicles of Norway spruce.
PMID:32777074
Rice Biofortification With Zinc and Selenium: A Transcriptomic Approach to Understand Mineral Accumulation in Flag Leaves.
PMID:32733530
Genotyping-by-sequencing and ecological niche modeling illuminate phylogeography, admixture, and Pleistocene range dynamics in quaking aspen (Populus tremuloides).
PMID:32551047
Genomics of Clinal Local Adaptation in Pinus sylvestris Under Continuous Environmental and Spatial Genetic Setting.
PMID:32546502
The chromatin-modifying protein HUB2 is involved in the regulation of lignin composition in xylem vessels.
PMID:32479638
RNA-Seq and secondary metabolite analyses reveal a putative defence-transcriptome in Norway spruce (Picea abies) against needle bladder rust (Chrysomyxa rhododendri) infection.
PMID:32357832
Sequencing of two transgenic early-flowering poplar lines confirmed vector-free single-locus T-DNA integration.
PMID:32356192
Structural evolution drives diversification of the large LRR-RLK gene family.
PMID:31990988
Comprehensive genomic analysis of the DUF4228 gene family in land plants and expression profiling of ATDUF4228 under abiotic stresses.
PMID:31900112
Cyberinfrastructure and resources to enable an integrative approach to studying forest trees.
PMID:31892954
The Mitogenome of Norway Spruce and a Reappraisal of Mitochondrial Recombination in Plants.
PMID:31774499
SH3Ps-Evolution and Diversity of a Family of Proteins Engaged in Plant Cytokinesis.
PMID:31717902
Ethylene Signaling Is Required for Fully Functional Tension Wood in Hybrid Aspen.
PMID:31611886
Ray Parenchymal Cells Contribute to Lignification of Tracheids in Developing Xylem of Norway Spruce.
PMID:31558578
Evaluation of potential genetic and chemical markers for Scots pine tolerance against Heterobasidion annosum infection.
PMID:31485774
RNA-seq of eight different poplar clones reveals conserved up-regulation of gene expression in response to insect herbivory.
PMID:31455224
Cyberinfrastructure to Improve Forest Health and Productivity: The Role of Tree Databases in Connecting Genomes, Phenomes, and the Environment.
PMID:31293610
Global gene expression analysis in etiolated and de-etiolated seedlings in conifers.
PMID:31276530
Conserved redox-dependent DNA binding of ROXY glutaredoxins with TGA transcription factors.
PMID:31245678
NCP activates chloroplast transcription by controlling phytochrome-dependent dual nuclear and plastidial switches.
PMID:31201314
A xylem-produced peptide PtrCLE20 inhibits vascular cambium activity in Populus.
PMID:31199056
Poplar carbohydrate-active enzymes: whole-genome annotation and functional analyses based on RNA expression data.
PMID:31111606
Transcriptome analysis of shade avoidance and shade tolerance in conifers.
PMID:31028482
The Road to Resistance in Forest Trees.
PMID:31001287
Selection and validation of reference genes for quantitative expression analysis of miRNAs and mRNAs in Poplar.
PMID:30996729
Occurrence and biosynthesis of cytokinins in poplar.
PMID:30980246
Evolution of the modular, disordered stress proteins known as dehydrins.
PMID:30726271
Stout camphor tree genome fills gaps in understanding of flowering plant genome evolution.
PMID:30626928
High Level of Conservation of Mitochondrial RNA Editing Sites Among Four Populus Species.
PMID:30617214
PlantEAR: Functional Analysis Platform for Plant EAR Motif-Containing Proteins.
PMID:30555515
Integrative Analysis of Three RNA Sequencing Methods Identifies Mutually Exclusive Exons of MADS-Box Isoforms During Early Bud Development in Picea abies.
PMID:30483285
Functional and evolutionary genomic inferences in Populus through genome and population sequencing of American and European aspen.
PMID:30373829
A major locus controls local adaptation and adaptive life history variation in a perennial plant.
PMID:29866176
CoNekT: an open-source framework for comparative genomic and transcriptomic network analyses.
PMID:29718322
Large effect quantitative trait loci for salicinoid phenolic glycosides in Populus: Implications for gene discovery.
PMID:29686853
Ethylene-Related Gene Expression Networks in Wood Formation.
PMID:29593753
Transcriptome analysis of embryonic domains in Norway spruce reveals potential regulators of suspensor cell death.
PMID:29499063
Transcriptional Roadmap to Seasonal Variation in Wood Formation of Norway Spruce.
PMID:29487121
The plant-specific histone residue Phe41 is important for genome-wide H3.1 distribution.
PMID:29434220
Dissection of Insertion-Deletion Variants within Differentially Expressed Genes Involved in Wood Formation in Populus.
PMID:29403506
Correction: Wentao Wu, et al. Evolution Analysis of the Aux/IAA Gene Family in Plants Shows Dual Origins and Variable Nuclear Localization Signals. Int. J. Mol. Sci. 2017, 18, 2107.
PMID:29300308
Slow evolution of sex-biased genes in the reproductive tissue of the dioecious plant Salix viminalis.
PMID:29274186
LTR Retrotransposons Show Low Levels of Unequal Recombination and High Rates of Intraelement Gene Conversion in Large Plant Genomes.
PMID:29228262
Genome-Wide Identification and Expression, Protein-Protein Interaction and Evolutionary Analysis of the Seed Plant-Specific BIG GRAIN and BIG GRAIN LIKE Gene Family.
PMID:29118774
Genome-wide identification and expression profile analysis of CCH gene family in Populus.
PMID:29085758
AspWood: High-Spatial-Resolution Transcriptome Profiles Reveal Uncharacterized Modularity of Wood Formation in Populus tremula.
PMID:28655750
GenomeHubs: simple containerized setup of a custom Ensembl database and web server for any species.
PMID:28605774
A Key Role for Apoplastic H2O2 in Norway Spruce Phenolic Metabolism.
PMID:28522458
Identification of TIFY Family Genes and Analysis of Their Expression Profiles in Response to Phytohormone Treatments and Melampsora larici-populina Infection in Poplar.
PMID:28424731
Gene co-expression network connectivity is an important determinant of selective constraint.
PMID:28406900
Comparative transcriptomic analysis reveals the roles of overlapping heat-/drought-responsive genes in poplars exposed to high temperature and drought.
PMID:28233854
Computational Tools for Genomic Studies in Plants.
PMID:28217007
NorWood: a gene expression resource for evo-devo studies of conifer wood development.
PMID:28186632
SDH6 and SDH7 Contribute to Anchoring Succinate Dehydrogenase to the Inner Mitochondrial Membrane in Arabidopsis thaliana.
PMID:28039307
Atypical Protein Phosphatase 2A Gene Families Do Not Expand via Paleopolyploidization.
PMID:28034953
Molecular Evolution and Expression Divergence of the Aconitase (ACO) Gene Family in Land Plants.
PMID:28018410
Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
PMID:27805809
Assessing the Gene Content of the Megagenome: Sugar Pine (Pinus lambertiana).
PMID:27799338
The Woody-Preferential Gene EgMYB88 Regulates the Biosynthesis of Phenylpropanoid-Derived Compounds in Wood.
PMID:27713753
Genome-wide analysis of lectin receptor-like kinases in Populus.
PMID:27580945
The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
PMID:27128442