Major Intrinsic Proteins Modification Database
Names
More detailed information about this field from each metasource.
Major Intrinsic Proteins Modification Database
metasource: Fairsharing.org
version: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
MIPModDB
metasource: Fairsharing.org
version: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:55.397797
mipmoddb
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:55.397797
Names
More detailed information about this field from each metasource.
Major Intrinsic Proteins Modification Database
metasource: Fairsharing.orgversion: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
MIPModDB
metasource: Fairsharing.orgversion: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:55.397797
mipmoddb
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:55.397797
Other names: MIPModDB, mipmoddb
Names
More detailed information about this field from each metasource.
Major Intrinsic Proteins Modification Database
metasource: Fairsharing.orgversion: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
MIPModDB
metasource: Fairsharing.orgversion: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:55.397797
mipmoddb
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:55.397797
This is a database of comparative protein structure models of the MIP (Major Intrinsic Protein) family of proteins. The MIPs have been identified from the completed genome sequence of organisms available at NCBI.
Description
More detailed information about this field from each metasource.
This is a database of comparative protein structure models of the MIP (Major Intrinsic Protein) family of proteins. The MIPs have been identified from the completed genome sequence of organisms available at NCBI.
metasource: Fairsharing.orgversion: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Major Intrinsic Protein superfamily Models
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
A database of comparative protein structure models of MIP (Major Intrinsic Protein) family of proteins. For each MIP entry, this database contains information about the source, gene structure, sequence features, substitutions in the conserved NPA motifs, structural model, the residues forming the selectivity filter and channel radius profile. Users can derive structure-based sequence alignment for sets of MIPs. Sequences and structures of MIPs can be downloaded.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:55.397797
Webpage:
http://bioinfo.iitk.ac.in/MIPModDB/Webpage
More detailed information about this field from each metasource.
http://bioinfo.iitk.ac.in/MIPModDB/
metasource: Fairsharing.orgversion: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:55.397797
http://bioinfo.iitk.ac.in/MIPModDB
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Publications:
Publications
More detailed information about this field from each metasource.
Genome-wide analysis of major intrinsic proteins in the tree plant Populus trichocarpa: characterization of XIP subfamily of aquaporins from evolutionary perspective
PMID: 19930558
metasource: Fairsharing.org
version: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Homology modeling of major intrinsic proteins in rice, maize and Arabidopsis: comparative analysis of transmembrane helix association and aromatic/arginine selectivity filters
PMID: 17445256
metasource: Fairsharing.org
version: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
MIPModDB: a central resource for the superfamily of major intrinsic proteins
PMID: 22080560
metasource: Fairsharing.org
version: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:55.397797
http://dx.doi.org/10.1093/nar/GKR914
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications
More detailed information about this field from each metasource.
Genome-wide analysis of major intrinsic proteins in the tree plant Populus trichocarpa: characterization of XIP subfamily of aquaporins from evolutionary perspective
PMID: 19930558
metasource: Fairsharing.org
version: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Homology modeling of major intrinsic proteins in rice, maize and Arabidopsis: comparative analysis of transmembrane helix association and aromatic/arginine selectivity filters
PMID: 17445256
metasource: Fairsharing.org
version: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
MIPModDB: a central resource for the superfamily of major intrinsic proteins
PMID: 22080560
metasource: Fairsharing.org
version: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:55.397797
http://dx.doi.org/10.1093/nar/GKR914
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
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Genome-wide analysis of major intrinsic proteins in the tree plant Populus trichocarpa: characterization of XIP subfamily of aquaporins from evolutionary perspective
PubMed citations: 88.
88 articles citing: Genome-wide analysis of major intrinsic proteins in the tree plant Populus trichocarpa: characterization of XIP subfamily of aquaporins from evolutionary perspective
Pearl Millet Aquaporin Gene PgPIP2;6 Improves Abiotic Stress Tolerance in Transgenic Tobacco. PMID:35356115
Genome-Wide Identification and Function of Aquaporin Genes During Dormancy and Sprouting Periods of Kernel-Using Apricot (Prunus armeniaca L.). PMID:34671366
Genome-wide identification of candidate aquaporins involved in water accumulation of pomegranate outer seed coat. PMID:34316414
Genome-Wide Identification, Structure Characterization, and Expression Pattern Profiling of the Aquaporin Gene Family in Betula pendula. PMID:34298887
Differential regulation of drought stress by biological membrane transporters and channels. PMID:34132878
Fungal X-Intrinsic Protein Aquaporin from Trichoderma atroviride: Structural and Functional Considerations. PMID:33672420
The Role of Aquaporin Overexpression in the Modulation of Transcription of Heavy Metal Transporters under Cadmium Treatment in Poplar. PMID:33383680
Physiological and PIP Transcriptional Responses to Progressive Soil Water Deficit in Three Mulberry Cultivars. PMID:32983200
Evolutionary and Predictive Functional Insights into the Aquaporin Gene Family in the Allotetraploid Plant Nicotiana tabacum. PMID:32635213
Evolutionary Understanding of Aquaporin Transport System in the Basal Eudicot Model Species Aquilegia coerulea. PMID:32604788
Genome Wild Analysis and Molecular Understanding of the Aquaporin Diversity in Olive Trees (Olea Europaea L.). PMID:32545387
Genome-wide identification and characterisation of Aquaporins in Nicotiana tabacum and their relationships with other Solanaceae species. PMID:32517797
Endomembrane Reorganization Induced by Heavy Metals. PMID:32283794
The Tonoplast Intrinsic Protein Gene KvTIP3 is Responsive to Different Abiotic Stresses in Kosteletzkya virginica. PMID:31998785
Is the E. coli Homolog of the Formate/Nitrite Transporter Family an Anion Channel? A Computational Study. PMID:31968229
Genome-wide identification, structure characterization, and expression pattern profiling of aquaporin gene family in cucumber. PMID:31390991
Gene-Wide Analysis of Aquaporin Gene Family in Malus domestica and Heterologous Expression of the Gene MpPIP2;1 Confers Drought and Salinity Tolerance in Arabidposis thaliana. PMID:31362376
Combining genome-wide and transcriptome-wide analyses reveal the evolutionary conservation and functional diversity of aquaporins in cotton. PMID:31262248
Overexpression of X Intrinsic Protein 1;1 in Nicotiana tabacum and Arabidopsis reduces boron allocation to shoot sink tissues. PMID:31245781
Genome-wide comparison reveals divergence of cassava and rubber aquaporin family genes after the recent whole-genome duplication. PMID:31092186
Identification and characterization of aquaporin genes in Arachis duranensis and Arachis ipaensis genomes, the diploid progenitors of peanut. PMID:30885116
Study on aquaporins of Setaria italica suggests the involvement of SiPIP3;1 and SiSIP1;1 in abiotic stress response. PMID:30759293
Investigation of the AQP Family in Soybean and the Promoter Activity of TIP2;6 in Heat Stress and Hormone Responses. PMID:30634702
Variation in Aquaporin and Physiological Responses Among Pinus contorta Families Under Different Moisture Conditions. PMID:30621354
Exploring the Roles of Aquaporins in Plant⁻Microbe Interactions. PMID:30545006
Presence of Intra-helical Salt-Bridge in Loop E Half-Helix Can Influence the Transport Properties of AQP1 and GlpF Channels: Molecular Dynamics Simulations of In Silico Mutants. PMID:30470864
Whole-Genome and Expression Analyses of Bamboo Aquaporin Genes Reveal Their Functions Involved in Maintaining Diurnal Water Balance in Bamboo Shoots. PMID:30400256
The Expanding Role of Vesicles Containing Aquaporins. PMID:30360436
Genome-Wide Identification and Transcriptional Regulation of Aquaporin Genes in Bread Wheat (Triticum aestivum L.) under Water Stress. PMID:30326657
Cooperativity in Plant Plasma Membrane Intrinsic Proteins (PIPs): Mechanism of Increased Water Transport in Maize PIP1 Channels in Hetero-tetramers. PMID:30104609
Genome-Wide Identification and Characterization of Aquaporins and Their Role in the Flower Opening Processes in Carnation (Dianthus caryophyllus). PMID:30060619
Structure and transcriptional regulation of the major intrinsic protein gene family in grapevine. PMID:29642857
The Roles of Aquaporins in Plant Stress Responses. PMID:29615577
MIP diversity from Trichoderma: Structural considerations and transcriptional modulation during mycoparasitic association with Fusarium solani olive trees. PMID:29543834
Regulation of aquaporins in plants under stress. PMID:29338771
Genome-wide identification and characterization of aquaporin gene family in Beta vulgaris. PMID:28948097
Plant and animal aquaporins crosstalk: what can be revealed from distinct perspectives. PMID:28871493
Understanding Aquaporin Transport System in Eelgrass (Zostera marina L.), an Aquatic Plant Species. PMID:28824671
Anion-selective Formate/nitrite transporters: taxonomic distribution, phylogenetic analysis and subfamily-specific conservation pattern in prokaryotes. PMID:28738779
Genome-wide identification of Major Intrinsic Proteins in Glycine soja and characterization of GmTIP2;1 function under salt and water stress. PMID:28646139
Characterization and Regulation of Aquaporin Genes of Sorghum [Sorghum bicolor (L.) Moench] in Response to Waterlogging Stress. PMID:28611797
Genome-wide identification, characterization, and expression profile of aquaporin gene family in flax (Linum usitatissimum). PMID:28447607
Single amino acid substitutions in the selectivity filter render NbXIP1;1α aquaporin water permeable. PMID:28279171
Genome-wide expression profiling of aquaporin genes confer responses to abiotic and biotic stresses in Brassica rapa. PMID:28122509
Expression of the citrus CsTIP2;1 gene improves tobacco plant growth, antioxidant capacity and physiological adaptation under stress conditions. PMID:28110414
Plant Aquaporins: Genome-Wide Identification, Transcriptomics, Proteomics, and Advanced Analytical Tools. PMID:28066459
The Eucalyptus Tonoplast Intrinsic Protein (TIP) Gene Subfamily: Genomic Organization, Structural Features, and Expression Profiles. PMID:27965702
The Grapevine Uncharacterized Intrinsic Protein 1 (VvXIP1) Is Regulated by Drought Stress and Transports Glycerol, Hydrogen Peroxide, Heavy Metals but Not Water. PMID:27504956
The Aquaporin Splice Variant NbXIP1;1α Is Permeable to Boric Acid and Is Phosphorylated in the N-terminal Domain. PMID:27379142
Genome-Wide Characterization of Major Intrinsic Proteins in Four Grass Plants and Their Non-Aqua Transport Selectivity Profiles with Comparative Perspective. PMID:27327960
The Hevea brasiliensis XIP aquaporin subfamily: genomic, structural and functional characterizations with relevance to intensive latex harvesting. PMID:27068521
Genome-Wide Identification of Jatropha curcas Aquaporin Genes and the Comparative Analysis Provides Insights into the Gene Family Expansion and Evolution in Hevea brasiliensis. PMID:27066041
Genome-wide identification and characterization of aquaporin gene family in moso bamboo (Phyllostachys edulis). PMID:26993482
Genome-wide identification of rubber tree (Hevea brasiliensis Muell. Arg.) aquaporin genes and their response to ethephon stimulation in the laticifer, a rubber-producing tissue. PMID:26606923
Aquaporin gene expression and physiological responses of Robinia pseudoacacia L. to the mycorrhizal fungus Rhizophagus irregularis and drought stress. PMID:26590998
Over-expression of AQUA1 in Populus alba Villafranca clone increases relative growth rate and water use efficiency, under Zn excess condition. PMID:26518428
Gene Structures, Evolution, Classification and Expression Profiles of the Aquaporin Gene Family in Castor Bean (Ricinus communis L.). PMID:26509832
Genome-Wide Characterization and Expression Analysis of Major Intrinsic Proteins during Abiotic and Biotic Stresses in Sweet Orange (Citrus sinensis L. Osb.). PMID:26397813
Genome-Wide Identification and Expression Analyses of Aquaporin Gene Family during Development and Abiotic Stress in Banana. PMID:26307965
How tree roots respond to drought. PMID:26284083
Genome-wide identification of aquaporin encoding genes in Brassica oleracea and their phylogenetic sequence comparison to Brassica crops and Arabidopsis. PMID:25904922
Genome-wide identification and characterization of aquaporin gene family in common bean (Phaseolus vulgaris L.). PMID:25846963
The role of water channel proteins in facilitating recovery of leaf hydraulic conductance from water stress in Populus trichocarpa. PMID:25406088
Ectopic overexpression of a novel Glycine soja stress-induced plasma membrane intrinsic protein increases sensitivity to salt and dehydration in transgenic Arabidopsis thaliana plants. PMID:25358447
Molecular evolution and functional divergence of X-intrinsic protein genes in plants. PMID:25284357
New subfamilies of major intrinsic proteins in fungi suggest novel transport properties in fungal channels: implications for the host-fungal interactions. PMID:25112373
Expression and characterization of plasma membrane aquaporins in stomatal complexes of Zea mays. PMID:25082269
Genome-wide identification and characterization of aquaporin genes (AQPs) in Chinese cabbage (Brassica rapa ssp. pekinensis). PMID:24972664
Aquaporins: highly regulated channels controlling plant water relations. PMID:24449709
Heteromerization of PIP aquaporins affects their intrinsic permeability. PMID:24367080
Genome-wide identification and expression analysis of aquaporins in tomato. PMID:24260152
Identification of new aquaporin genes and single nucleotide polymorphism in bread wheat. PMID:24250219
Involvement of rose aquaporin RhPIP1;1 in ethylene-regulated petal expansion through interaction with RhPIP2;1. PMID:23748738
Herbivory of maize by southern corn rootworm induces expression of the major intrinsic protein ZmNIP1;1 and leads to the discovery of a novel aquaporin ZmPIP2;8. PMID:23673351
Transpirational demand affects aquaporin expression in poplar roots. PMID:23599275
Biotrophic transportome in mutualistic plant-fungal interactions. PMID:23572325
Genome-wide sequence characterization and expression analysis of major intrinsic proteins in soybean (Glycine max L.). PMID:23437113
Developmental and environmental regulation of Aquaporin gene expression across Populus species: divergence or redundancy? PMID:23393587
Evaluation of codon biology in citrus and Poncirus trifoliata based on genomic features and frame corrected expressed sequence tags. PMID:23315666
Identification and expression of nine oak aquaporin genes in the primary root axis of two oak species, Quercus petraea and Quercus robur. PMID:23284785
microRNAs targeting DEAD-box helicases are involved in salinity stress response in rice (Oryza sativa L.). PMID:23043463
Annotation of Selaginella moellendorffii Major Intrinsic Proteins and the Evolution of the Protein Family in Terrestrial Plants. PMID:22639644
Overexpression of PIP2;5 aquaporin alleviates effects of low root temperature on cell hydraulic conductivity and growth in Arabidopsis. PMID:22434042
MIPModDB: a central resource for the superfamily of major intrinsic proteins. PMID:22080560
Plant aquaporins with non-aqua functions: deciphering the signature sequences. PMID:21308399
The aconitate hydratase family from Citrus. PMID:20958971
Identification of the family of aquaporin genes and their expression in upland cotton (Gossypium hirsutum L.). PMID:20626869
Regulation of plasma membrane aquaporins by inoculation with a Bacillus megaterium strain in maize (Zea mays L.) plants under unstressed and salt-stressed conditions. PMID:20499084 -
Homology modeling of major intrinsic proteins in rice, maize and Arabidopsis: comparative analysis of transmembrane helix association and aromatic/arginine selectivity filters
PubMed citations: 41.
41 articles citing: Homology modeling of major intrinsic proteins in rice, maize and Arabidopsis: comparative analysis of transmembrane helix association and aromatic/arginine selectivity filters
Genome-Wide Identification and Function of Aquaporin Genes During Dormancy and Sprouting Periods of Kernel-Using Apricot (Prunus armeniaca L.). PMID:34671366
MtNIP5;1, a novel Medicago truncatula boron diffusion facilitator induced under deficiency. PMID:33297962
Aquaporins are main contributors to root hydraulic conductivity in pearl millet [Pennisetum glaucum (L) R. Br.]. PMID:33001997
Insights into the Selectivity Mechanisms of Grapevine NIP Aquaporins. PMID:32933135
Evolutionary and Predictive Functional Insights into the Aquaporin Gene Family in the Allotetraploid Plant Nicotiana tabacum. PMID:32635213
Elucidating the Possible Involvement of Maize Aquaporins in the Plant Boron Transport and Homeostasis Mediated by Rhizophagus irregularis under Drought Stress Conditions. PMID:32143345
Elucidating the Possible Involvement of Maize Aquaporins and Arbuscular Mycorrhizal Symbiosis in the Plant Ammonium and Urea Transport under Drought Stress Conditions. PMID:31979273
Genome-wide characterization and expression analysis of aquaporins in salt cress (Eutrema salsugineum). PMID:31565576
Presence of Intra-helical Salt-Bridge in Loop E Half-Helix Can Influence the Transport Properties of AQP1 and GlpF Channels: Molecular Dynamics Simulations of In Silico Mutants. PMID:30470864
Whole-Genome and Expression Analyses of Bamboo Aquaporin Genes Reveal Their Functions Involved in Maintaining Diurnal Water Balance in Bamboo Shoots. PMID:30400256
Cooperativity in Plant Plasma Membrane Intrinsic Proteins (PIPs): Mechanism of Increased Water Transport in Maize PIP1 Channels in Hetero-tetramers. PMID:30104609
Genome-wide identification and characterization of aquaporin gene family in Beta vulgaris. PMID:28948097
Anion-selective Formate/nitrite transporters: taxonomic distribution, phylogenetic analysis and subfamily-specific conservation pattern in prokaryotes. PMID:28738779
Molecular cloning and expression analysis of major intrinsic protein gene in Chlamydomonas sp. ICE-L from Antarctica. PMID:28597046
Genome-Wide Characterization of Major Intrinsic Proteins in Four Grass Plants and Their Non-Aqua Transport Selectivity Profiles with Comparative Perspective. PMID:27327960
Genome-wide identification and characterization of aquaporin gene family in moso bamboo (Phyllostachys edulis). PMID:26993482
Gene Structures, Evolution, Classification and Expression Profiles of the Aquaporin Gene Family in Castor Bean (Ricinus communis L.). PMID:26509832
Genome-wide identification of aquaporin encoding genes in Brassica oleracea and their phylogenetic sequence comparison to Brassica crops and Arabidopsis. PMID:25904922
Key steps in type III secretion system (T3SS) towards translocon assembly with potential sensor at plant plasma membrane. PMID:25469869
Molecular evolution and functional divergence of X-intrinsic protein genes in plants. PMID:25284357
Expression of tomato SlTIP2;2 enhances the tolerance to salt stress in the transgenic Arabidopsis and interacts with target proteins. PMID:25186161
New subfamilies of major intrinsic proteins in fungi suggest novel transport properties in fungal channels: implications for the host-fungal interactions. PMID:25112373
A new LxxxA motif in the transmembrane Helix3 of maize aquaporins belonging to the plasma membrane intrinsic protein PIP2 group is required for their trafficking to the plasma membrane. PMID:24989232
Expression Analysis of Sugarcane Aquaporin Genes under Water Deficit. PMID:24490055
Two rice plasma membrane intrinsic proteins, OsPIP2;4 and OsPIP2;7, are involved in transport and providing tolerance to boron toxicity. PMID:24142111
Identification and expression of nine oak aquaporin genes in the primary root axis of two oak species, Quercus petraea and Quercus robur. PMID:23284785
Annotation of Selaginella moellendorffii Major Intrinsic Proteins and the Evolution of the Protein Family in Terrestrial Plants. PMID:22639644
Yeast aquaglyceroporins use the transmembrane core to restrict glycerol transport. PMID:22593571
MIPModDB: a central resource for the superfamily of major intrinsic proteins. PMID:22080560
The aromatic/arginine selectivity filter of NIP aquaporins plays a critical role in substrate selectivity for silicon, boron, and arsenic. PMID:21586431
Molecular dynamics simulation studies of GLUT4: substrate-free and substrate-induced dynamics and ATP-mediated glucose transport inhibition. PMID:21151967
Identification of the family of aquaporin genes and their expression in upland cotton (Gossypium hirsutum L.). PMID:20626869
Boron toxicity tolerance in barley through reduced expression of the multifunctional aquaporin HvNIP2;1. PMID:20581256
Genome-wide analysis of major intrinsic proteins in the tree plant Populus trichocarpa: characterization of XIP subfamily of aquaporins from evolutionary perspective. PMID:19930558
End-to-end and end-to-middle interhelical interactions: new classes of interacting helix pairs in protein structures. PMID:19770500
Cloning, characterization and expression analysis of tonoplast intrinsic proteins and glutamine synthetase in ryegrass (Lolium perenne L.). PMID:19655146
Divergence in function and expression of the NOD26-like intrinsic proteins in plants. PMID:19604350
Plant aquaporin selectivity: where transport assays, computer simulations and physiology meet. PMID:19565186
Finding and characterizing tunnels in macromolecules with application to ion channels and pores. PMID:18849407
A subgroup of plant aquaporins facilitate the bi-directional diffusion of As(OH)3 and Sb(OH)3 across membranes. PMID:18544156
Unexpected complexity of the aquaporin gene family in the moss Physcomitrella patens. PMID:18430224 -
MIPModDB: a central resource for the superfamily of major intrinsic proteins
PubMed citations: 14.
14 articles citing: MIPModDB: a central resource for the superfamily of major intrinsic proteins
Diversification of the aquaporin family in geographical isolated oyster species promote the adaptability to dynamic environments. PMID:35296243
Polyploidization and pseudogenization in allotetraploid frog Xenopus laevis promote the evolution of aquaporin family in higher vertebrates. PMID:32727380
Combining genome-wide and transcriptome-wide analyses reveal the evolutionary conservation and functional diversity of aquaporins in cotton. PMID:31262248
Presence of Intra-helical Salt-Bridge in Loop E Half-Helix Can Influence the Transport Properties of AQP1 and GlpF Channels: Molecular Dynamics Simulations of In Silico Mutants. PMID:30470864
Cooperativity in Plant Plasma Membrane Intrinsic Proteins (PIPs): Mechanism of Increased Water Transport in Maize PIP1 Channels in Hetero-tetramers. PMID:30104609
A structural preview of aquaporin 8 via homology modeling of seven vertebrate isoforms. PMID:29454339
Pollen Aquaporins: The Solute Factor. PMID:27881985
Pentamidine Is Not a Permeant but a Nanomolar Inhibitor of the Trypanosoma brucei Aquaglyceroporin-2. PMID:26828608
New subfamilies of major intrinsic proteins in fungi suggest novel transport properties in fungal channels: implications for the host-fungal interactions. PMID:25112373
Molecular identification of first putative aquaporins in snails. PMID:24445747
Aquaporin 2 mutations in Trypanosoma brucei gambiense field isolates correlate with decreased susceptibility to pentamidine and melarsoprol. PMID:24130910
Drug resistance in African trypanosomiasis: the melarsoprol and pentamidine story. PMID:23375541
Two putative-aquaporin genes are differentially expressed during arbuscular mycorrhizal symbiosis in Lotus japonicus. PMID:23046713
Aquaglyceroporin 2 controls susceptibility to melarsoprol and pentamidine in African trypanosomes. PMID:22711816 - http://dx.doi.org/10.1093/nar/GKR914
Tags:
Tags
More detailed information about this field from each metasource.
gene
metasource: Fairsharing.org
version: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
gene feature
metasource: Fairsharing.org
version: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
homologous
metasource: Fairsharing.org
version: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
structure-based sequence alignment
metasource: Fairsharing.org
version: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
protein sequence databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
databases of individual protein families
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
protein structural motifs and surfaces
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:55.397797
gene and protein families
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:55.397797
proteins
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:55.397797
sequence sites, features and motifs
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:55.397797
protein sites, features and motifs
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:55.397797
Tags
More detailed information about this field from each metasource.
gene
metasource: Fairsharing.orgversion: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
gene feature
metasource: Fairsharing.orgversion: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
homologous
metasource: Fairsharing.orgversion: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
structure-based sequence alignment
metasource: Fairsharing.orgversion: FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk; Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
protein sequence databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
databases of individual protein families
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
protein structural motifs and surfaces
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:55.397797
gene and protein families
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:55.397797
proteins
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:55.397797
sequence sites, features and motifs
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:55.397797
protein sites, features and motifs
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:55.397797
gene gene feature homologous structure-based sequence alignment protein sequence protein family protein structural motifs and surfaces gene and protein families proteins sequence sites, features and motifs protein sites, features and motifs
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