TIGRFAMs

Other names: TIGRFAMS protein family database, tigrfams

TIGRFAMs is a collection of manually curated protein families focusing primarily on prokaryotic sequences.It consists of hidden Markov models (HMMs), multiple sequence alignments, Gene Ontology (GO) terminology, Enzyme Commission (EC) numbers, gene symbols, protein family names, descriptive text, cross-references to related models in TIGRFAMs and other databases, and pointers to literature. Originally developed at The Institute for Genomic Research (TIGR) and later at its successor, the J. Craig Venter Institute (JCVI), it is now maintained by the NCBI.

Webpage:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/tigrfams/

Licence:
Name: Creative Commons Attribution-ShareAlike 4.0 International (CC BY-SA 4.0)
URL: https://creativecommons.org/licenses/by-sa/4.0/

Publications:

Tags:

hidden markov model multiple sequence alignment protein protein sequence protein domains and classification gene and protein families sequence sites, features and motifs

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