FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:04.789129

flybase
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:04.789129

Other names: flybase

This source may no longer be available. No known URL could be resolved successfully.

Genetic, genomic and molecular information pertaining to the model organism Drosophila melanogaster and related sequences. This database also contains information relating to human disease models in Drosophila, the use of transgenic constructs containing sequence from other organisms in Drosophila, and information on where to buy Drosophila strains and constructs.

Webpage:

http://flybase.org/

Publications: (26)

Publications
More detailed information about this field from each metasource.

FlyBase: enhancing Drosophila Gene Ontology annotations
PMID: 18948289
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase 2.0: the next generation
PMID: 30364959
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase at 25: looking to the future
PMID: 27799470
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase 101--the basics of navigating FlyBase
PMID: 22127867
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:04.789129

FlyBase 102--advanced approaches to interrogating FlyBase
PMID: 24234449
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations
PMID: 25398896
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

The FlyBase database of the Drosophila genome projects and community literature
PMID: 12519974
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase: establishing a Gene Group resource for Drosophila melanogaster
PMID: 26467478
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase: genes and gene models
PMID: 15608223
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase: genomes by the dozen
PMID: 17099233
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase: anatomical data, images and queries
PMID: 16381917
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

The FlyBase database of the Drosophila Genome Projects and community literature
PMID: 9847148
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase : a database for the Drosophila research community
PMID: 18641940
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase: integration and improvements to query tools
PMID: 18160408
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

The FlyBase database of the Drosophila genome projects and community literature
PMID: 11752267
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase: a Drosophila database. The FlyBase consortium
PMID: 9045212
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase portals to human disease research using Drosophila models
PMID: 26935103
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase--the Drosophila genetic database
PMID: 7925011
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

Directly e-mailing authors of newly published papers encourages community curation
PMID: 22554788
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
PMID: 26109357
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase: a Drosophila database
PMID: 9399806
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase--the Drosophila database. The FlyBase Consortium
PMID: 7937045
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
PMID: 26109356
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase: the Drosophila database
PMID: 8594600
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

Using FlyBase to Find Functionally Related Drosophila Genes
PMID: 29761468
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

Exploring FlyBase Data Using QuickSearch
PMID: 27930807
metasource: Fairsharing.org
version: FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: Feb. 23, 2021, 3:51 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

FlyBase: enhancing Drosophila Gene Ontology annotations PubMed citations: 447.

447 articles citing: FlyBase: enhancing Drosophila Gene Ontology annotations

Co-Expression Network Modeling Identifies Specific Inflammation and Neurological Disease-Related Genes mRNA Modules in Mood Disorder. PMID:35386281
FISH Going Meso-Scale: A Microscopic Search for Chromatin Domains. PMID:34805161
Cell competition from development to neurodegeneration. PMID:34190316
TIMEOR: a web-based tool to uncover temporal regulatory mechanisms from multi-omics data. PMID:34125906
Structural and Genetic Determinants of Convergence in the Drosophila tRNA Structure-Function Map. PMID:33528599
The application of a biostimulant based on tannins affects root architecture and improves tolerance to salinity in tomato plants. PMID:33432010
High density genotype storage for plant breeding in the Chado schema of Breedbase. PMID:33175872
Identification of NLRP3 Inflammation-Related Gene Promoter Hypomethylation in Diabetic Retinopathy. PMID:33156339
Graph-based exploitation of gene ontology using GOxploreR for scrutinizing biological significance. PMID:33028846
Identification of Four Potential Biomarkers Associated With Coronary Artery Disease in Non-diabetic Patients by Gene Co-expression Network Analysis. PMID:32714363
Hub Proteins Involved in RAW 264.7 Macrophages Exposed to Direct Current Electric Field. PMID:32599940
Constitutive and Plastic Gene Expression Variation Associated with Desiccation Resistance Differences in the Drosophila americana Species Group. PMID:32019054
circ-016910 sponges miR-574-5p to regulate cell physiology and milk synthesis via MAPK and PI3K/AKT-mTOR pathways in GMECs. PMID:31663119
Insights into the Functions of LncRNAs in Drosophila. PMID:31546813
Identification of key pathways and genes in nasopharyngeal carcinoma using bioinformatics analysis. PMID:30988824
Drosophila mRNA Localization During Later Development: Past, Present, and Future. PMID:30899273
Comprehensive bioinformatics analysis of critical lncRNAs, mRNAs and miRNAs in non‑alcoholic fatty liver disease. PMID:30720100
Bioinformatics analysis to identify the key genes affecting the progression and prognosis of hepatocellular carcinoma. PMID:30705088
Smooth Muscle Transcriptome Browser: offering genome-wide references and expression profiles of transcripts expressed in intestinal SMC, ICC, and PDGFRα+ cells. PMID:30674925
Identification of key regulators of pancreatic ductal adenocarcinoma using bioinformatics analysis of microarray data. PMID:30633213
Identification of eight key miRNAs associated with renal cell carcinoma: A meta-analysis. PMID:30344735
Identification of key microRNAs and their targets in exosomes of pancreatic cancer using bioinformatics analysis. PMID:30278585
Bioinformatics analysis to identify action targets in NCI-N87 gastric cancer cells exposed to quercetin. PMID:30266078
lncSLdb: a resource for long non-coding RNA subcellular localization. PMID:30219837
Geppetto: a reusable modular open platform for exploring neuroscience data and models. PMID:30201843
Mechanisms of Huangqi Decoction Granules () on Hepatitis B Cirrhosis Patients Based on RNA-Sequencing. PMID:30155678
A random forest classifier predicts recurrence risk in patients with ovarian cancer. PMID:30066910
Inter and Intraspecific Genomic Divergence in Drosophila montana Shows Evidence for Cold Adaptation. PMID:30010752
Bioinformatics analysis of microarray data to explore the key genes involved in HSF4 mutation-induced cataract. PMID:29977800
Conservation of the behavioral and transcriptional response to social experience among Drosophilids. PMID:29797548
Using FlyBase to Find Functionally Related Drosophila Genes. PMID:29761468
Functional Validation of Candidate Genes Detected by Genomic Feature Models. PMID:29519937
Improving Interpretation of Cardiac Phenotypes and Enhancing Discovery With Expanded Knowledge in the Gene Ontology. PMID:29440116
Investigating the Mechanisms of Action of Depside Salt from Salvia miltiorrhiza Using Bioinformatic Analysis. PMID:29348768
Logistic regression analysis for the identification of the metastasis-associated signaling pathways of osteosarcoma. PMID:29328361
Characterization of dFOXO binding sites upstream of the Insulin Receptor P2 promoter across the Drosophila phylogeny. PMID:29200426
Weighted gene co-expression network analysis of expression data of monozygotic twins identifies specific modules and hub genes related to BMI. PMID:29132311
Identification of Splicing Quantitative Trait Loci (sQTL) in Drosophila melanogaster with Developmental Lead (Pb2+) Exposure. PMID:29114259
Circular RNA profile of infantile hemangioma by microarray analysis. PMID:29095957
Fitness differences due to allelic variation at Esterase-4 locus in Drosophila ananassae. PMID:28947710
Investigating the mechanisms of papillary thyroid carcinoma using transcriptome analysis. PMID:28849102
Genome-wide comparative analysis of four Indian Drosophila species. PMID:28660309
Genetics of alcohol consumption in Drosophila melanogaster. PMID:28627812
Multiple Trait Covariance Association Test Identifies Gene Ontology Categories Associated with Chill Coma Recovery Time in Drosophila melanogaster. PMID:28546557
The anatomy of phenotype ontologies: principles, properties and applications. PMID:28387809
ATGC transcriptomics: a web-based application to integrate, explore and analyze de novo transcriptomic data. PMID:28222698
Exo-miRExplorer: A Comprehensive Resource for Exploring and Comparatively Analyzing Exogenous MicroRNAs. PMID:28203233
Function annotation of peptides generated from the non-coding regions of D. melanogaster genome. PMID:28149056
The Genetic Basis of Natural Variation in Drosophila (Diptera: Drosophilidae) Virgin Egg Retention. PMID:28042107
Exploring FlyBase Data Using QuickSearch. PMID:27930807
Identification of key genes induced by platelet-rich plasma in human dermal papilla cells using bioinformatics methods. PMID:27922680
Identfication of key miRNAs in pancreatitis using bioinformatics analysis of microarray data. PMID:27840954
Using FlyBase, a Database of Drosophila Genes and Genomes. PMID:27730573
Identification of genes involved in Epstein-Barr virus-associated nasopharyngeal carcinoma. PMID:27698802
SMCis: An Effective Algorithm for Discovery of Cis-Regulatory Modules. PMID:27637070
Integrated Analysis of DNA Methylation and mRNA Expression Profiles Data to Identify Key Genes in Lung Adenocarcinoma. PMID:27610375
Physiological effects of heat stress on Hawaiian picture-wing Drosophila: genome-wide expression patterns and stress-related traits. PMID:27293683
Comparative transcriptomic analysis of human and Drosophila extracellular vesicles. PMID:27282340
Genomic Prediction for Quantitative Traits Is Improved by Mapping Variants to Gene Ontology Categories in Drosophila melanogaster. PMID:27235308
The pugilistDominant Mutation of Drosophila melanogaster: A Simple-Sequence Repeat Disorder Reveals Localized Transport in the Eye. PMID:26999432
Preparing for Winter: The Transcriptomic Response Associated with Different Day Lengths in Drosophila montana. PMID:26976440
Weighted gene co-expression network analysis identifies specific modules and hub genes related to coronary artery disease. PMID:26944061
Parallel Evolution of Copy-Number Variation across Continents in Drosophila melanogaster. PMID:26809315
Biocuration with insufficient resources and fixed timelines. PMID:26708987
Preadult life history variation determines adult transcriptome expression. PMID:26615085
CBP binding outside of promoters and enhancers in Drosophila melanogaster. PMID:26604986
deepBase v2.0: identification, expression, evolution and function of small RNAs, LncRNAs and circular RNAs from deep-sequencing data. PMID:26590255
Biochemical identification of new proteins involved in splicing repression at the Drosophila P-element exonic splicing silencer. PMID:26545814
Evolutionary divergence of core and post-translational circadian clock genes in the pitcher-plant mosquito, Wyeomyia smithii. PMID:26444857
The digital revolution in phenotyping. PMID:26420780
Absence of canonical marks of active chromatin in developmentally regulated genes. PMID:26280901
Identification of Drosophila Mutants Affecting Defense to an Entomopathogenic Fungus. PMID:26202798
Biogeography of Drosophila (Diptera: Drosophilidae) in East and Southeast Asia. PMID:26078303
Tissue elasticity regulated tumor gene expression: implication for diagnostic biomarkers of primitive neuroectodermal tumor. PMID:25774514
How consistent are the transcriptome changes associated with cold acclimation in two species of the Drosophila virilis group? PMID:25669607
A genome-wide association study for nutritional indices in Drosophila. PMID:25583649
Identification and computational analysis of gene regulatory elements. PMID:25561628
Deciphering life history transcriptomes in different environments. PMID:25442828
Phylostratigraphic profiles in zebrafish uncover chordate origins of the vertebrate brain. PMID:25415965
CisMiner: genome-wide in-silico cis-regulatory module prediction by fuzzy itemset mining. PMID:25268582
Species determination of Culicoides biting midges via peptide profiling using matrix-assisted laser desorption ionization mass spectrometry. PMID:25152308
No boundaries: genomes, organisms, and ecological interactions responsible for divergence and reproductive isolation. PMID:25149252
The use of semantic similarity measures for optimally integrating heterogeneous Gene Ontology data from large scale annotation pipelines. PMID:25147557
Wnt pathway activation increases hypoxia tolerance during development. PMID:25093834
Peroxisomes are required for lipid metabolism and muscle function in Drosophila melanogaster. PMID:24945818
Inductive matrix completion for predicting gene-disease associations. PMID:24932006
Ranking biomedical annotations with annotator's semantic relevancy. PMID:24899918
Prioritization of neurodevelopmental disease genes by discovery of new mutations. PMID:24866042
Tissue-specific direct microtransfer of nanomaterials into Drosophila embryos as a versatile in vivo test bed for nanomaterial toxicity assessment. PMID:24790441
Patterns of positive selection in seven ant genomes. PMID:24782441
Co-activation of microRNAs by Zelda is essential for early Drosophila development. PMID:24764079
A novel highly divergent protein family identified from a viviparous insect by RNA-seq analysis: a potential target for tsetse fly-specific abortifacients. PMID:24763277
Visualization of genome signatures of eukaryote genomes by batch-learning self-organizing map with a special emphasis on Drosophila genomes. PMID:24741568
Endogenously imprinted genes in Drosophila melanogaster. PMID:24658702
The Drosophila melanogaster phospholipid flippase dATP8B is required for odorant receptor function. PMID:24651716
Towards decrypting cryptobiosis--analyzing anhydrobiosis in the tardigrade Milnesium tardigradum using transcriptome sequencing. PMID:24651535
A pipeline for the de novo assembly of the Themira biloba (Sepsidae: Diptera) transcriptome using a multiple k-mer length approach. PMID:24621177
Molecular evidence of RNA editing in Bombyx chemosensory protein family. PMID:24551045
Citrus sinensis annotation project (CAP): a comprehensive database for sweet orange genome. PMID:24489955
Microarray expression profile analysis of long non-coding RNAs of advanced stage human gastric cardia adenocarcinoma. PMID:24414129
Zfrp8/PDCD2 is required in ovarian stem cells and interacts with the piRNA pathway machinery. PMID:24381196
Insulin signaling regulates neurite growth during metamorphic neuronal remodeling. PMID:24357229
Male X-linked genes in Drosophila melanogaster are compensated independently of the Male-Specific Lethal complex. PMID:24279328
Variation of gene expression associated with colonisation of an anthropized environment: comparison between African and European populations of Drosophila simulans. PMID:24260296
Disruption of Drosophila melanogaster lipid metabolism genes causes tissue overgrowth associated with altered developmental signaling. PMID:24244188
Meta-analysis of expression of l(3)mbt tumor-associated germline genes supports the model that a soma-to-germline transition is a hallmark of human cancers. PMID:24243547
A p53 enhancer region regulates target genes through chromatin conformations in cis and in trans. PMID:24240233
Two rapidly evolving genes contribute to male fitness in Drosophila. PMID:24221639
Human intellectual disability genes form conserved functional modules in Drosophila. PMID:24204314
The Drosophila ubiquitin-specific protease Puffyeye regulates dMyc-mediated growth. PMID:24173801
De novo ORFs in Drosophila are important to organismal fitness and evolved rapidly from previously non-coding sequences. PMID:24146629
Requirement for commissureless2 function during dipteran insect nerve cord development. PMID:24026811
Genetic background and GxE interactions modulate the penetrance of a naturally occurring wing mutation in Drosophila melanogaster. PMID:24002866
TrOn: an anatomical ontology for the beetle Tribolium castaneum. PMID:23936240
The conditional nature of genetic interactions: the consequences of wild-type backgrounds on mutational interactions in a genome-wide modifier screen. PMID:23935530
Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology. PMID:23895341
Computational detection of abundant long-range nucleotide covariation in Drosophila genomes. PMID:23887147
Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions. PMID:23879659
Cloud-based uniform ChIP-Seq processing tools for modENCODE and ENCODE. PMID:23875683
Viability, longevity, and egg production of Drosophila melanogaster are regulated by the miR-282 microRNA. PMID:23852386
Evolution of three parent genes and their retrogene copies in Drosophila species. PMID:23841016
A selective sweep across species boundaries in Drosophila. PMID:23827876
Unlocking the potential of survival data for model organisms through a new database and online analysis platform: SurvCurv. PMID:23826631
Prediction of gene-phenotype associations in humans, mice, and plants using phenologs. PMID:23800157
The RNA export factor, Nxt1, is required for tissue specific transcriptional regulation. PMID:23754955
Structure and function of an insect α-carboxylesterase (αEsterase7) associated with insecticide resistance. PMID:23733941
Targeting of Painting of fourth to roX1 and roX2 proximal sites suggests evolutionary links between dosage compensation and the regulation of the fourth chromosome in Drosophila melanogaster. PMID:23733888
Identification of novel arthropod vector G protein-coupled receptors. PMID:23705687
Diversification and dispersal of the Hawaiian Drosophilidae: the evolution of Scaptomyza. PMID:23669011
Proteomic characterization of inbreeding-related cold sensitivity in Drosophila melanogaster. PMID:23658762
Prediction and validation of gene-disease associations using methods inspired by social network analyses. PMID:23650495
Genomic resources for multiple species in the Drosophila ananassae species group. PMID:23639891
Chromatin-associated proteins HP1 and Mod(mdg4) modify Y-linked regulatory variation in the drosophila testis. PMID:23636736
An essential role for zygotic expression in the pre-cellular Drosophila embryo. PMID:23593026
A methodology to infer gene networks from spatial patterns of expression--an application to fluorescence in situ hybridization images. PMID:23591446
Recurrent and recent selective sweeps in the piRNA pathway. PMID:23550757
Transcriptome Profiling Following Neuronal and Glial Expression of ALS-Linked SOD1 in Drosophila. PMID:23550139
Prediction of Drosophila melanogaster gene function using Support Vector Machines. PMID:23547736
Three levels of regulation lead to protamine and Mst77F expression in Drosophila. PMID:23466740
Prevalence of multinucleotide replacements in evolution of primates and Drosophila. PMID:23447710
Why so many unknown genes? Partitioning orphans from a representative transcriptome of the lone star tick Amblyomma americanum. PMID:23445305
Selective sweep in the Flotillin-2 region of European Drosophila melanogaster. PMID:23437190
STOP using just GO: a multi-ontology hypothesis generation tool for high throughput experimentation. PMID:23409969
Recognition of methylated peptides by Drosophila melanogaster polycomb chromodomain. PMID:23320494
Patterns of nucleotide diversity at the regions encompassing the Drosophila insulin-like peptide (dilp) genes: demography vs. positive selection in Drosophila melanogaster. PMID:23308258
Structure-based whole-genome realignment reveals many novel noncoding RNAs. PMID:23296921
Mutations to the piRNA pathway component aubergine enhance meiotic drive of segregation distorter in Drosophila melanogaster. PMID:23267055
Drosophila protein interaction map (DPiM): a paradigm for metazoan protein complex interactions. PMID:23222005
The bromodomain-containing protein tBRD-1 is specifically expressed in spermatocytes and is essential for male fertility. PMID:23213453
Fife, a Drosophila Piccolo-RIM homolog, promotes active zone organization and neurotransmitter release. PMID:23197698
Using genome-wide expression profiling to define gene networks relevant to the study of complex traits: from RNA integrity to network topology. PMID:23195313
Functional relevance of the newly evolved sperm dynein intermediate chain multigene family in Drosophila melanogaster males. PMID:23181161
The transcriptional regulator lola is required for stem cell maintenance and germ cell differentiation in the Drosophila testis. PMID:23159836
Differential regulation of evoked and spontaneous neurotransmitter release by C-terminal modifications of complexin. PMID:23159779
A targeted glycan-related gene screen reveals heparan sulfate proteoglycan sulfation regulates WNT and BMP trans-synaptic signaling. PMID:23144627
Glypicans regulate JAK/STAT signaling and distribution of the Unpaired morphogen. PMID:23093424
Microbial virus genome annotation-mustering the troops to fight the sequence onslaught. PMID:23084289
Characterization of genomic regulatory domains conserved across the genus Drosophila. PMID:23042552
Drosophila Psf2 has a role in chromosome condensation. PMID:22993141
Sex peptide of Drosophila melanogaster males is a global regulator of reproductive processes in females. PMID:22977156
Evaluation of research in biomedical ontologies. PMID:22962340
Drosophila neuroligin 1 regulates synaptic growth and function in response to activity and phosphoinositide-3-kinase. PMID:22954894
Analysis of the transcriptomes downstream of Eyeless and the Hedgehog, Decapentaplegic and Notch signaling pathways in Drosophila melanogaster. PMID:22952997
Analysis of variation at transcription factor binding sites in Drosophila and humans. PMID:22950968
Segmental dataset and whole body expression data do not support the hypothesis that non-random movement is an intrinsic property of Drosophila retrogenes. PMID:22950647
Identification of genetic modifiers of CagA-induced epithelial disruption in Drosophila. PMID:22919616
Microtubule-depolymerizing kinesin KLP10A restricts the length of the acentrosomal meiotic spindle in Drosophila females. PMID:22865737
The chromosomal passenger complex is required for meiotic acentrosomal spindle assembly and chromosome biorientation. PMID:22865736
Cell type-specific genomics of Drosophila neurons. PMID:22855560
Drosophila tubulin-binding cofactor B is required for microtubule network formation and for cell polarity. PMID:22855530
Reverse engineering biomolecular systems using -omic data: challenges, progress and opportunities. PMID:22833495
The visual orientation memory of Drosophila requires Foraging (PKG) upstream of Ignorant (RSK2) in ring neurons of the central complex. PMID:22815538
Ecdysone induced gene expression is associated with acetylation of histone H3 lysine 23 in Drosophila melanogaster. PMID:22808194
Compressive genomics. PMID:22781691
Long deletion hot spots inside retrotransposon 297. PMID:22773004
Use of mutagenesis, genetic mapping and next generation transcriptomics to investigate insecticide resistance mechanisms. PMID:22768270
An inventory of peroxisomal proteins and pathways in Drosophila melanogaster. PMID:22758915
The maize b1 paramutation control region causes epigenetic silencing in Drosophila melanogaster. PMID:22729404
Detecting differential usage of exons from RNA-seq data. PMID:22722343
Re-analysis of the larval testis data on meiotic sex chromosome inactivation revealed evidence for tissue-specific gene expression related to the drosophila X chromosome. PMID:22691264
Type-I prenyl protease function is required in the male germline of Drosophila melanogaster. PMID:22690372
Expansion and evolution of the X-linked testis specific multigene families in the melanogaster species subgroup. PMID:22649555
Divergent functions through alternative splicing: the Drosophila CRMP gene in pyrimidine metabolism, brain, and behavior. PMID:22649077
Fitness conferred by replaced amino acids declines with time. PMID:22628094
Genes associated with honey bee behavioral maturation affect clock-dependent and -independent aspects of daily rhythmic activity in fruit flies. PMID:22606218
Sequence-specific targeting of dosage compensation in Drosophila favors an active chromatin context. PMID:22570616
Loss of the starvation-induced gene Rack1 leads to glycogen deficiency and impaired autophagic responses in Drosophila. PMID:22562043
An ontological approach to describing neurons and their relationships. PMID:22557965
Age-specific variation in immune response in Drosophila melanogaster has a genetic basis. PMID:22554890
Spatiotemporal network motif reveals the biological traits of developmental gene regulatory networks in Drosophila melanogaster. PMID:22548745
Open semantic annotation of scientific publications using DOMEO. PMID:22541592
Mutations in NSUN2 cause autosomal-recessive intellectual disability. PMID:22541559
Genome sequencing reveals complex speciation in the Drosophila simulans clade. PMID:22534282
Dynamic interactions between Bombyx mori nucleopolyhedrovirus and its host cells revealed by transcriptome analysis. PMID:22532689
Genome-wide transcription analysis of clinal genetic variation in Drosophila. PMID:22514645
A shared role for RBF1 and dCAP-D3 in the regulation of transcription with consequences for innate immunity. PMID:22496667
Protein landscape at Drosophila melanogaster telomere-associated sequence repeats. PMID:22493064
Drosophila muscleblind codes for proteins with one and two tandem zinc finger motifs. PMID:22479576
POF regulates the expression of genes on the fourth chromosome in Drosophila melanogaster by binding to nascent RNA. PMID:22473994
A large bioactive BMP ligand with distinct signaling properties is produced by alternative proconvertase processing. PMID:22472650
Cis-by-Trans regulatory divergence causes the asymmetric lethal effects of an ancestral hybrid incompatibility gene. PMID:22457639
Evidence for elevated mutation rates in low-quality genotypes. PMID:22451943
Comparative proteomics reveals a significant bias toward alternative protein isoforms with conserved structure and function. PMID:22446687
The generation of chromosomal deletions to provide extensive coverage and subdivision of the Drosophila melanogaster genome. PMID:22445104
The diversification of the LIM superclass at the base of the metazoa increased subcellular complexity and promoted multicellular specialization. PMID:22438907
Tetrahymena Genome Database Wiki: a community-maintained model organism database. PMID:22434841
Considerations for creating and annotating the budding yeast Genome Map at SGD: a progress report. PMID:22434826
Human cryptochrome-1 confers light independent biological activity in transgenic Drosophila correlated with flavin radical stability. PMID:22427812
Sequence signatures involved in targeting the Male-Specific Lethal complex to X-chromosomal genes in Drosophila melanogaster. PMID:22424303
Population genomics of resource exploitation: insights from gene expression profiles of two Daphnia ecotypes fed alternate resources. PMID:22423327
CORECLUST: identification of the conserved CRM grammar together with prediction of gene regulation. PMID:22422836
Genetic screen for regulators of lymph gland homeostasis and hemocyte maturation in Drosophila. PMID:22413093
Identification and properties of 1,119 candidate lincRNA loci in the Drosophila melanogaster genome. PMID:22403033
The role of structural disorder in the rewiring of protein interactions through evolution. PMID:22389433
A Whole-Chromosome Analysis of Meiotic Recombination in Drosophila melanogaster. PMID:22384403
Genetic analysis in Drosophila reveals a role for the mitochondrial protein p32 in synaptic transmission. PMID:22384382
Modulation of the activity of a polycomb-group response element in Drosophila by a mutation in the transcriptional activator woc. PMID:22384357
Multiple Quantitative Trait Loci Influence the Shape of a Male-Specific Genital Structure in Drosophila melanogaster. PMID:22384345
Soybean Knowledge Base (SoyKB): a web resource for soybean translational genomics. PMID:22369646
The Drosophila melanogaster host model. PMID:22368770
Allatostatin-A neurons inhibit feeding behavior in adult Drosophila. PMID:22345563
MouseFinder: Candidate disease genes from mouse phenotype data. PMID:22331800
Segmental duplication, microinversion, and gene loss associated with a complex inversion breakpoint region in Drosophila. PMID:22328714
Evaluation of the role of functional constraints on the integrity of an ultraconserved region in the genus Drosophila. PMID:22319453
Functional evidence that a recently evolved Drosophila sperm-specific gene boosts sperm competition. PMID:22308475
Control of target gene specificity during metamorphosis by the steroid response gene E93. PMID:22308414
Molecular evolution in nonrecombining regions of the Drosophila melanogaster genome. PMID:22275518
The TAGteam motif facilitates binding of 21 sequence-specific transcription factors in the Drosophila embryo. PMID:22247430
Whole-genome sequence of Schistosoma haematobium. PMID:22246508
Duox, Flotillin-2, and Src42A are required to activate or delimit the spread of the transcriptional response to epidermal wounds in Drosophila. PMID:22242003
Autophagy can promote but is not required for epithelial cell extrusion in the amnioserosa of the Drosophila embryo. PMID:22240588
Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development. PMID:22231485
Lamellipodia-based migrations of larval epithelial cells are required for normal closure of the adult epidermis of Drosophila. PMID:22230614
The effects of methylmercury on Notch signaling during embryonic neural development in Drosophila melanogaster. PMID:22230562
crinkled reveals a new role for Wingless signaling in Drosophila denticle formation. PMID:22219350
Evolution of biological interaction networks: from models to real data. PMID:22204388
Adaptation to P element transposon invasion in Drosophila melanogaster. PMID:22196730
Mechanisms of intron gain and loss in Drosophila. PMID:22182367
Regulation of a duplicated locus: Drosophila sloppy paired is replete with functionally overlapping enhancers. PMID:22178246
STELLAR: fast and exact local alignments. PMID:22151882
The muscle pattern of the Drosophila abdomen depends on a subdivision of the anterior compartment of each segment. PMID:22147953
MetaBase--the wiki-database of biological databases. PMID:22139927
AutismKB: an evidence-based knowledgebase of autism genetics. PMID:22139918
Genome-wide analysis of retrogene polymorphisms in Drosophila melanogaster. PMID:22135405
Mutations in the catalytic loop HRD motif alter the activity and function of Drosophila Src64. PMID:22132220
Insulin receptor-mediated signaling via phospholipase C-γ regulates growth and differentiation in Drosophila. PMID:22132213
A remarkably stable TipE gene cluster: evolution of insect Para sodium channel auxiliary subunits. PMID:22098672
Protein composition of interband regions in polytene and cell line chromosomes of Drosophila melanogaster. PMID:22093916
Developmental control of gene copy number by repression of replication initiation and fork progression. PMID:22090375
modMine: flexible access to modENCODE data. PMID:22080565
GeneWeaver: a web-based system for integrative functional genomics. PMID:22080549
Developing a community-based genetic nomenclature for anole lizards. PMID:22077994
FlyRNAi.org--the database of the Drosophila RNAi screening center: 2012 update. PMID:22067456
The Candida genome database incorporates multiple Candida species: multispecies search and analysis tools with curated gene and protein information for Candida albicans and Candida glabrata. PMID:22064862
Chromatin-associated RNA interference components contribute to transcriptional regulation in Drosophila. PMID:22056986
Developmental regulation of N-terminal H2B methylation in Drosophila melanogaster. PMID:22053083
Widespread polymorphism in the positions of stop codons in Drosophila melanogaster. PMID:22051795
SWI/SNF regulates the alternative processing of a specific subset of pre-mRNAs in Drosophila melanogaster. PMID:22047075
Genetic characterization of ebi reveals its critical role in Drosophila wing growth. PMID:22041576
A protein complex network of Drosophila melanogaster. PMID:22036573
Successive increases in the resistance of Drosophila to viral infection through a transposon insertion followed by a Duplication. PMID:22028673
Zelda binding in the early Drosophila melanogaster embryo marks regions subsequently activated at the maternal-to-zygotic transition. PMID:22028662
Proteomic and functional genomic landscape of receptor tyrosine kinase and ras to extracellular signal-regulated kinase signaling. PMID:22028469
Evidence of abundant stop codon readthrough in Drosophila and other metazoa. PMID:21994247
The genomic impact of 100 million years of social evolution in seven ant species. PMID:21982512
Comparison of embryonic expression within multigene families using the FlyExpress discovery platform reveals more spatial than temporal divergence. PMID:21960044
Comparative analysis of serine/arginine-rich proteins across 27 eukaryotes: insights into sub-family classification and extent of alternative splicing. PMID:21935421
Rational design of temperature-sensitive alleles using computational structure prediction. PMID:21912654
Genomic sequence around butterfly wing development genes: annotation and comparative analysis. PMID:21909358
Patterns of gene expression in Drosophila InsP3 receptor mutant larvae reveal a role for InsP3 signaling in carbohydrate and energy metabolism. PMID:21901161
Nuclear structure and chromosome segregation in Drosophila male meiosis depend on the ubiquitin ligase dTopors. PMID:21900273
Wg signaling via Zw3 and mad restricts self-renewal of sensory organ precursor cells in Drosophila. PMID:21868604
Identification and experimental validation of splicing regulatory elements in Drosophila melanogaster reveals functionally conserved splicing enhancers in metazoans. PMID:21865603
Evolutionary patterns of recently emerged animal duplogs. PMID:21859807
Evolution of the Max and Mlx networks in animals. PMID:21859806
Detecting past positive selection through ongoing negative selection. PMID:21859804
MaizeGDB becomes 'sequence-centric'. PMID:21847242
Improved accuracy of supervised CRM discovery with interpolated Markov models and cross-species comparison. PMID:21821659
Synthetic spike-in standards for RNA-seq experiments. PMID:21816910
Genomic identification of a putative circadian system in the cladoceran crustacean Daphnia pulex. PMID:21798832
Conversion events in gene clusters. PMID:21798034
Molecular evolution of phosphoprotein phosphatases in Drosophila. PMID:21789237
Caenorhabditis briggsae recombinant inbred line genotypes reveal inter-strain incompatibility and the evolution of recombination. PMID:21779179
Somatic sex-specific transcriptome differences in Drosophila revealed by whole transcriptome sequencing. PMID:21756339
Comparative genomic analysis of Drosophila melanogaster and vector mosquito developmental genes. PMID:21754989
Semaphorin-1a is required for Aedes aegypti embryonic nerve cord development. PMID:21738767
PhenomeNET: a whole-phenome approach to disease gene discovery. PMID:21737429
The genome of the leaf-cutting ant Acromyrmex echinatior suggests key adaptations to advanced social life and fungus farming. PMID:21719571
Predicting mutually exclusive spliced exons based on exon length, splice site and reading frame conservation, and exon sequence homology. PMID:21718515
Nitric oxide coordinates metabolism, growth, and development via the nuclear receptor E75. PMID:21715559
Loss of Drosophila melanogaster p21-activated kinase 3 suppresses defects in synapse structure and function caused by spastin mutations. PMID:21705760
The Strategies WDK: a graphical search interface and web development kit for functional genomics databases. PMID:21705364
The iFly tracking system for an automated locomotor and behavioural analysis of Drosophila melanogaster. PMID:21698336
The role of the effective population size in compensatory evolution. PMID:21680889
SIDECACHE: Information access, management and dissemination framework for web services. PMID:21672219
Transcriptional response to foraging experience in the honey bee mushroom bodies. PMID:21634017
The CD59 family member Leaky/Coiled is required for the establishment of the blood-brain barrier in Drosophila. PMID:21613501
Conserved RNA structures in the non-canonical Hac1/Xbp1 intron. PMID:21593604
Genome Surveyor 2.0: cis-regulatory analysis in Drosophila. PMID:21593125
Wake-up-call, a lin-52 paralogue, and Always early, a lin-9 homologue physically interact, but have opposing functions in regulating testis-specific gene expression. PMID:21570388
Dynamic reprogramming of chromatin accessibility during Drosophila embryo development. PMID:21569360
The MaizeGDB Genome Browser tutorial: one example of database outreach to biologists via video. PMID:21565781
msl2 mRNA is bound by free nuclear MSL complex in Drosophila melanogaster. PMID:21551218
A protein network-guided screen for cell cycle regulators in Drosophila. PMID:21548953
Methods and strategies for gene structure curation in WormBase. PMID:21543339
Chromatin: constructing the big picture. PMID:21527910
Transcription initiation from within P elements generates hypomorphic mutations in Drosophila melanogaster. PMID:21527778
Ontologies and standards in bioscience research: for machine or for human. PMID:21519400
The Drosophila gene disruption project: progress using transposons with distinctive site specificities. PMID:21515576
Microarray analysis uncovers a role for Tip60 in nervous system function and general metabolism. PMID:21494552
Major prospects for exploring canine vector borne diseases and novel intervention methods using 'omic technologies. PMID:21489242
CycADS: an annotation database system to ease the development and update of BioCyc databases. PMID:21474551
A versatile in vivo system for directed dissection of gene expression patterns. PMID:21473015
Drosophila Ctf4 is essential for efficient DNA replication and normal cell cycle progression. PMID:21470422
UniProt Knowledgebase: a hub of integrated protein data. PMID:21447597
A link between impaired purine nucleotide synthesis and apoptosis in Drosophila melanogaster. PMID:21441212
Population-based resequencing of experimentally evolved populations reveals the genetic basis of body size variation in Drosophila melanogaster. PMID:21437274
HMMerThread: detecting remote, functional conserved domains in entire genomes by combining relaxed sequence-database searches with fold recognition. PMID:21423752
The Ly6 protein coiled is required for septate junction and blood brain barrier organisation in Drosophila. PMID:21423573
Protein complexes are central in the yeast genetic landscape. PMID:21390331
High resolution mapping of Twist to DNA in Drosophila embryos: Efficient functional analysis and evolutionary conservation. PMID:21383317
Mapping of signaling networks through synthetic genetic interaction analysis by RNAi. PMID:21378980
A genetic screen for mutations affecting gonad formation in Drosophila reveals a role for the slit/robo pathway. PMID:21377458
Diversity in protein glycosylation among insect species. PMID:21373189
Functional conservation of the Drosophila hybrid incompatibility gene Lhr. PMID:21366928
PoPoolation DB: a user-friendly web-based database for the retrieval of natural polymorphisms in Drosophila. PMID:21366916
Ral GTPase promotes asymmetric Notch activation in the Drosophila eye in response to Frizzled/PCP signaling by repressing ligand-independent receptor activation. PMID:21350007
The genome sequence of the leaf-cutter ant Atta cephalotes reveals insights into its obligate symbiotic lifestyle. PMID:21347285
Noncanonical compensation of zygotic X transcription in early Drosophila melanogaster development revealed through single-embryo RNA-seq. PMID:21346796
Evolutionary patterns of phosphorylated serines. PMID:21306633
Neurotransmitter Transporter-Like: a male germline-specific SLC6 transporter required for Drosophila spermiogenesis. PMID:21298005
Drosophila lacking a homologue of mammalian ALDH2 have multiple fitness defects. PMID:21296060
Functional screening of Alzheimer pathology genome-wide association signals in Drosophila. PMID:21295279
Association between sex-biased gene expression and mutations with sex-specific phenotypic consequences in Drosophila. PMID:21292631
Regulation of hemocytes in Drosophila requires dappled cytochrome b5. PMID:21279680
ZFNGenome: a comprehensive resource for locating zinc finger nuclease target sites in model organisms. PMID:21276248
Transcriptional networks for alcohol sensitivity in Drosophila melanogaster. PMID:21270389
The maternal and early embryonic transcriptome of the milkweed bug Oncopeltus fasciatus. PMID:21266083
Whole-genome analysis reveals that active heat shock factor binding sites are mostly associated with non-heat shock genes in Drosophila melanogaster. PMID:21264254
PoPoolation: a toolbox for population genetic analysis of next generation sequencing data from pooled individuals. PMID:21253599
False negative rates in Drosophila cell-based RNAi screens: a case study. PMID:21251254
Role for sumoylation in systemic inflammation and immune homeostasis in Drosophila larvae. PMID:21203476
Comprehensive analysis of the chromatin landscape in Drosophila melanogaster. PMID:21179089
Polycomb preferentially targets stalled promoters of coding and noncoding transcripts. PMID:21177970
The transcriptional diversity of 25 Drosophila cell lines. PMID:21177962
Correlating traits of gene retention, sequence divergence, duplicability and essentiality in vertebrates, arthropods, and fungi. PMID:21148284
Notch regulates numb: integration of conditional and autonomous cell fate specification. PMID:21148185
Evolutionary patterns of amino acid substitutions in 12 Drosophila genomes. PMID:21143793
Bovine Genome Database: integrated tools for genome annotation and discovery. PMID:21123190
FlyFactorSurvey: a database of Drosophila transcription factor binding specificities determined using the bacterial one-hybrid system. PMID:21097781
Characterization of maltase clusters in the genus Drosophila. PMID:21082169
Drosophila orthologue of WWOX, the chromosomal fragile site FRA16D tumour suppressor gene, functions in aerobic metabolism and regulates reactive oxygen species. PMID:21075834
The BioGRID Interaction Database: 2011 update. PMID:21071413
Hymenoptera Genome Database: integrated community resources for insect species of the order Hymenoptera. PMID:21071397
Genomic differentiation between temperate and tropical Australian populations of Drosophila melanogaster. PMID:21059887
Central regulation of locomotor behavior of Drosophila melanogaster depends on a CASK isoform containing CaMK-like and L27 domains. PMID:21059886
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored. PMID:21045058
Defining genetic factors that modulate intergenerational CAG repeat instability in Drosophila melanogaster. PMID:21041558
DroID 2011: a comprehensive, integrated resource for protein, transcription factor, RNA and gene interactions for Drosophila. PMID:21036869
RBPDB: a database of RNA-binding specificities. PMID:21036867
OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011. PMID:20972218
Interoperability between phenotype and anatomy ontologies. PMID:20971987
REDfly v3.0: toward a comprehensive database of transcriptional regulatory elements in Drosophila. PMID:20965965
Molecular characterization of the evolution of phagosomes. PMID:20959821
ParameciumDB in 2011: new tools and new data for functional and comparative genomics of the model ciliate Paramecium tetraurelia. PMID:20952411
Intrinsic characteristics of neighboring DNA modulate transposable element activity in Drosophila melanogaster. PMID:20944016
genenames.org: the HGNC resources in 2011. PMID:20929869
Dynamic, mating-induced gene expression changes in female head and brain tissues of Drosophila melanogaster. PMID:20925960
Conservation of an RNA regulatory map between Drosophila and mammals. PMID:20921232
A new resource for characterizing X-linked genes in Drosophila melanogaster: systematic coverage and subdivision of the X chromosome with nested, Y-linked duplications. PMID:20876560
The FLIGHT Drosophila RNAi database: 2010 update. PMID:20855970
Sustainable digital infrastructure. Although databases and other online resources have become a central tool for biological research, their long-term support and maintenance is far from secure. PMID:20847740
Celebrating 100 years of Drosophila research. PMID:20847739
Planar cell polarity: the orientation of larval denticles in Drosophila appears to depend on gradients of Dachsous and Fat. PMID:20826534
Identification of attractive drug targets in neglected-disease pathogens using an in silico approach. PMID:20808766
Drosophila Sld5 is essential for normal cell cycle progression and maintenance of genomic integrity. PMID:20709026
Peristalsis in the junction region of the Drosophila larval midgut is modulated by DH31 expressing enteroendocrine cells. PMID:20698983
Genomic architecture of MHC-linked odorant receptor gene repertoires among 16 vertebrate species. PMID:20680261
Genomic repertoires of DNA-binding transcription factors across the tree of life. PMID:20675356
Genome-wide identification of cis-regulatory motifs and modules underlying gene coregulation using statistics and phylogeny. PMID:20671200
Mechanosensilla in the adult abdomen of Drosophila: engrailed and slit help to corral the peripheral sensory axons into segmental bundles. PMID:20667917
Introgression of Drosophila simulans nuclear pore protein 160 in Drosophila melanogaster alone does not cause inviability but does cause female sterility. PMID:20647504
The Drosophila SUN protein Spag4 cooperates with the coiled-coil protein Yuri Gagarin to maintain association of the basal body and spermatid nucleus. PMID:20647369
NELF potentiates gene transcription in the Drosophila embryo. PMID:20634899
Choosing a genome browser for a Model Organism Database: surveying the maize community. PMID:20627860
Hyperexpression of the X chromosome in both sexes results in extensive female bias of X-linked genes in the flour beetle. PMID:20624738
Structure-function analysis of the short splicing variant carboxypeptidase encoded by Drosophila melanogaster silver. PMID:20600119
Iron testes: sperm mitochondria as a context for dissecting iron metabolism. PMID:20598113
Ecological adaptation of diverse honey bee (Apis mellifera) populations. PMID:20559562
In vivo RNAi: today and tomorrow. PMID:20534712
Comparative transcriptional profiling identifies takeout as a gene that regulates life span. PMID:20519778
A paired-end sequencing strategy to map the complex landscape of transcription initiation. PMID:20495556
Paucity and preferential suppression of transgenes in late replication domains of the D. melanogaster genome. PMID:20492674
A novel predicted bromodomain-related protein affects coordination between meiosis and spermiogenesis in Drosophila and is required for male meiotic cytokinesis. PMID:20491580
Population-level transcriptome sequencing of nonmodel organisms Erynnis propertius and Papilio zelicaon. PMID:20478048
Distinct contributions of conserved modules to Runt transcription factor activity. PMID:20462957
Non-additive interactions involving two distinct elements mediate sloppy-paired regulation by pair-rule transcription factors. PMID:20435028
Four-jointed modulates growth and planar polarity by reducing the affinity of dachsous for fat. PMID:20434337
Individual carboxypeptidase D domains have both redundant and unique functions in Drosophila development and behavior. PMID:20386952
Essential loci in centromeric heterochromatin of Drosophila melanogaster. I: the right arm of chromosome 2. PMID:20382826
Discrimination of different species from the genus Drosophila by intact protein profiling using matrix-assisted laser desorption ionization mass spectrometry. PMID:20374617
Protein Bioinformatics Infrastructure for the Integration and Analysis of Multiple High-Throughput "omics" Data. PMID:20369061
A set of ontologies to drive tools for the control of vector-borne diseases. PMID:20363364
Binding site turnover produces pervasive quantitative changes in transcription factor binding between closely related Drosophila species. PMID:20351773
Deletional bias across the three domains of life. PMID:20333185
Brain transcriptomic analysis in paper wasps identifies genes associated with behaviour across social insect lineages. PMID:20236980
Transcriptome analysis of reproductive tissue and intrauterine developmental stages of the tsetse fly (Glossina morsitans morsitans). PMID:20214793
Towards the integration of mouse databases - definition and implementation of solutions to two use-cases in mouse functional genomics. PMID:20205870
GOing Bayesian: model-based gene set analysis of genome-scale data. PMID:20172960
Two frequenins in Drosophila: unveiling the evolutionary history of an unusual neuronal calcium sensor (NCS) duplication. PMID:20170488
Minimizing off-target signals in RNA fluorescent in situ hybridization. PMID:20164092
Sex determination in Drosophila: The view from the top. PMID:20160499
In vivo RNAi rescue in Drosophila melanogaster with genomic transgenes from Drosophila pseudoobscura. PMID:20126626
Sex and the single embryo: early deveiopment in the Mediterranean fruit fly, Ceratitis capitata. PMID:20102629
Alternative exon usage in the single CPT1 gene of Drosophila generates functional diversity in the kinetic properties of the enzyme: differential expression of alternatively spliced variants in Drosophila tissues. PMID:20061394
PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium. PMID:20015972
Transpositionally active episomal hAT elements. PMID:20003420
The 2010 Nucleic Acids Research Database Issue and online Database Collection: a community of data resources. PMID:19965766
454 pyrosequencing based transcriptome analysis of Zygaena filipendulae with focus on genes involved in biosynthesis of cyanogenic glucosides. PMID:19954531
NBRP databases: databases of biological resources in Japan. PMID:19934255
Control in time and space: Tramtrack69 cooperates with Notch and Ecdysone to repress ectopic fate and shape changes during Drosophila egg chamber maturation. PMID:19934014
The peculiarities of large intron splicing in animals. PMID:19924226
Representing ontogeny through ontology: a developmental biologist's guide to the gene ontology. PMID:19921742
MidExDB: a database of Drosophila CNS midline cell gene expression. PMID:19903351
InParanoid 7: new algorithms and tools for eukaryotic orthology analysis. PMID:19892828
Combinatorial binding predicts spatio-temporal cis-regulatory activity. PMID:19890324
Genetic screen in Drosophila melanogaster uncovers a novel set of genes required for embryonic epithelial repair. PMID:19884309
FlyTF: improved annotation and enhanced functionality of the Drosophila transcription factor database. PMID:19884132
Effects of social isolation on neuromuscular excitability and aggressive behaviors in Drosophila: altered responses by Hk and gsts1, two mutations implicated in redox regulation. PMID:19863269
A second-site noncomplementation screen for modifiers of Rho1 signaling during imaginal disc morphogenesis in Drosophila. PMID:19862331
Genetic testing of the hypothesis that hybrid male lethality results from a failure in dosage compensation. PMID:19841095
Proteomics data repositories. PMID:19795424
SilkDB v2.0: a platform for silkworm (Bombyx mori ) genome biology. PMID:19793867
Fine-grained annotation and classification of de novo predicted LTR retrotransposons. PMID:19786494
The Aspergillus Genome Database, a curated comparative genomics resource for gene, protein and sequence information for the Aspergillus research community. PMID:19773420
Gene networks in Drosophila melanogaster: integrating experimental data to predict gene function. PMID:19758432
A synaptic vesicle-associated Ca2+ channel promotes endocytosis and couples exocytosis to endocytosis. PMID:19737521
What can you do with 0.1x genome coverage? A case study based on a genome survey of the scuttle fly Megaselia scalaris (Phoridae). PMID:19689807
A chromatin insulator mediates transgene homing and very long-range enhancer-promoter communication. PMID:19675129
A guide to the Proteomics Identifications Database proteomics data repository. PMID:19662629
Curled encodes the Drosophila homolog of the vertebrate circadian deadenylase Nocturnin. PMID:19581445
JBrowse: a next-generation genome browser. PMID:19570905
The High Throughput Sequence Annotation Service (HT-SAS) - the shortcut from sequence to true Medline words. PMID:19445703
Drosophila liquid facets-Related encodes Golgi epsin and is an essential gene required for cell proliferation, growth, and patterning. PMID:19376106
The multi-AT-hook chromosomal protein of Drosophila melanogaster, D1, is dispensable for viability. PMID:19293138
Inside FlyBase: biocuration as a career. PMID:19182544
Integrating computational biology and forward genetics in Drosophila. PMID:19165344
FlyBase 2.0: the next generation PubMed citations: 329.

329 articles citing: FlyBase 2.0: the next generation

Transcriptional responses are oriented towards different components of the rearing environment in two Drosophila sibling species. PMID:35840900
Deep learning frameworks for protein-protein interaction prediction. PMID:35832624
Dengue Virus-2 Infection Affects Fecundity and Elicits Specific Transcriptional Changes in the Ovaries of Aedes aegypti Mosquitoes. PMID:35814655
Emerging Roles of RNA-Binding Proteins in Neurodevelopment. PMID:35735914
Functional Divergence of the bag-of-marbles Gene in the Drosophila melanogaster Species Group. PMID:35714266
Sex-specific variation in R-loop formation in Drosophila melanogaster. PMID:35687614
γ-secretase promotes Drosophila postsynaptic development through the cleavage of a Wnt receptor. PMID:35654038
The Lateral Epidermis Actively Counteracts Pulling by the Amnioserosa During Dorsal Closure. PMID:35652100
The genetic basis of structural colour variation in mimetic Heliconius butterflies. PMID:35634924
α-Phenylalanyl tRNA synthetase competes with Notch signaling through its N-terminal domain. PMID:35486661
Chemoreceptor co-expression in Drosophila melanogaster olfactory neurons. PMID:35442190
Evolution of assortative mating following selective introgression of pigmentation genes between two Drosophila species. PMID:35432924
Population-scale long-read sequencing uncovers transposable elements associated with gene expression variation and adaptive signatures in Drosophila. PMID:35413957
Meiotic, genomic and evolutionary properties of crossover distribution in Drosophila yakuba. PMID:35320272
"A fly appeared": sable, a classic Drosophila mutation, maps to Yippee, a gene affecting body color, wings, and bristles. PMID:35266526
FlyBase: a guided tour of highlighted features. PMID:35266522
Phylogenetic analysis of forkhead transcription factors in the Panarthropoda. PMID:35230523
Zebrafish information network, the knowledgebase for Danio rerio research. PMID:35166825
Characterization of Gfat1 (zeppelin) and Gfat2, Essential Paralogous Genes Which Encode the Enzymes That Catalyze the Rate-Limiting Step in the Hexosamine Biosynthetic Pathway in Drosophila melanogaster. PMID:35159258
Amphioxus muscle transcriptomes reveal vertebrate-like myoblast fusion genes and a highly conserved role of insulin signalling in the metabolism of muscle. PMID:35105312
Drosophila female reproductive glands contribute to mating plug composition and the timing of sperm ejection. PMID:35105240
regCNN: identifying Drosophila genome-wide cis-regulatory modules via integrating the local patterns in epigenetic marks and transcription factor binding motifs. PMID:35035784
Drosophila p53 isoforms have overlapping and distinct functions in germline genome integrity and oocyte quality control. PMID:35023826
Fos regulates macrophage infiltration against surrounding tissue resistance by a cortical actin-based mechanism in Drosophila. PMID:34990456
Evolution of Olfactory Receptors Tuned to Mustard Oils in Herbivorous Drosophilidae. PMID:34963012
Poly(ADP-ribosyl)ating pathway regulates development from stem cell niche to longevity control. PMID:34949666
Age-Related Changes of Gene Expression Profiles in Drosophila. PMID:34946931
DamID transcriptional profiling identifies the Snail/Scratch transcription factor Kahuli as an Alk target in the Drosophila visceral mesoderm. PMID:34905617
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources. PMID:34897464
PTP61F Mediates Cell Competition and Mitigates Tumorigenesis. PMID:34884538
Intermolecular Interactions Drive Protein Adaptive and Coadaptive Evolution at Both Species and Population Levels. PMID:34878126
The Drosophila HP1 family is associated with active gene expression across chromatin contexts. PMID:34849911
Co-option of immune effectors by the hormonal signalling system triggering metamorphosis in Drosophila melanogaster. PMID:34843450
Population biology of accessory gland-expressed de novo genes in Drosophila melanogaster. PMID:34791207
The disease-associated proteins Drosophila Nab2 and Ataxin-2 interact with shared RNAs and coregulate neuronal morphology. PMID:34791182
A novel approach to co-expression network analysis identifies modules and genes relevant for moulting and development in the Atlantic salmon louse (Lepeophtheirus salmonis). PMID:34789144
APPRIS: selecting functionally important isoforms. PMID:34755885
Natural variation in the transcriptional response of Drosophila melanogaster to oxidative stress. PMID:34747443
Speciation in North American Junonia from a genomic perspective. PMID:34744257
Transcriptome profiling reveals the developmental regulation of NaCl-treated Forcipomyia taiwana eggs. PMID:34732124
Genomics analysis of hexanoic acid exposure in Drosophila species. PMID:34718544
Regulated inositol synthesis is critical for balanced metabolism and development in Drosophila melanogaster. PMID:34710213
Repression precedes independent evolutionary gains of a highly specific gene expression pattern. PMID:34706247
Highly Parallel Genomic Selection Response in Replicated Drosophila melanogaster Populations with Reduced Genetic Variation. PMID:34694407
Sex determination gene transformer regulates the male-female difference in Drosophila fat storage via the adipokinetic hormone pathway. PMID:34672260
Identification and characterization of CYPs induced in the Drosophila antenna by exposure to a plant odorant. PMID:34654888
A Novel Neuron-Specific Regulator of the V-ATPase in Drosophila. PMID:34620624
Genome-wide phenotypic RNAi screen in the Drosophila wing: global parameters. PMID:34599819
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. PMID:34599810
Diverse wMel variants of Wolbachia pipientis differentially rescue fertility and cytological defects of the bag of marbles partial loss of function mutation in Drosophila melanogaster. PMID:34580706
Tramtrack acts during late pupal development to direct ant caste identity. PMID:34550980
Circadian regulation of the Drosophila astrocyte transcriptome. PMID:34543266
D-SCRIPT translates genome to phenome with sequence-based, structure-aware, genome-scale predictions of protein-protein interactions. PMID:34536380
Regulatory regions in natural transposable element insertions drive interindividual differences in response to immune challenges in Drosophila. PMID:34521452
A Meta-Analysis of Bioelectric Data in Cancer, Embryogenesis, and Regeneration. PMID:34476377
Predicting host dependency factors of pathogens in Drosophila melanogaster using machine learning. PMID:34471501
An alternative D. melanogaster 7SK snRNP. PMID:34461828
Topoisomerase II is regulated by translationally controlled tumor protein for cell survival during organ growth in Drosophila. PMID:34453033
Single-cell RNA-sequencing reveals pre-meiotic X-chromosome dosage compensation in Drosophila testis. PMID:34403408
Filtering of Data-Driven Gene Regulatory Networks Using Drosophila melanogaster as a Case Study. PMID:34394179
Expression of the foraging gene in adult Drosophila melanogaster. PMID:34382904
Developmental Alcohol Exposure in Drosophila: Effects on Adult Phenotypes and Gene Expression in the Brain. PMID:34366927
BREC: an R package/Shiny app for automatically identifying heterochromatin boundaries and estimating local recombination rates along chromosomes. PMID:34362304
Sequestration to lipid droplets promotes histone availability by preventing turnover of excess histones. PMID:34355743
The conserved C2 phospholipid-binding domain in Delta contributes to robust Notch signalling. PMID:34347930
The clinical importance of tandem exon duplication-derived substitutions. PMID:34302486
Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching. PMID:34283226
An actin-related protein that is most highly expressed in Drosophila testes is critical for embryonic development. PMID:34282725
Ancestry analysis indicates two different sets of essential genes in eukaryotic model species. PMID:34279742
The tweety Gene Family: From Embryo to Disease. PMID:34262434
In Silico Identification and Functional Characterization of Conserved miRNAs in the Genome of Cryptosporidium parvum. PMID:34262265
Tripal, a community update after 10 years of supporting open source, standards-based genetic, genomic and breeding databases. PMID:34251419
Isoform-specific roles of the Drosophila filamin-type protein Jitterbug (Jbug) during development. PMID:34173831
GENCODE Pseudogenes. PMID:34165709
Identification of genetic modifiers of lifespan on a high sugar diet in the Drosophila Genetic Reference Panel. PMID:34141921
Insights into the genomic evolution of insects from cricket genomes. PMID:34127782
R2DT is a framework for predicting and visualising RNA secondary structure using templates. PMID:34108470
Patterns and Causes of Signed Linkage Disequilibria in Flies and Plants. PMID:34097067
Short and long sleeping mutants reveal links between sleep and macroautophagy. PMID:34085929
Engineered reproductively isolated species drive reversible population replacement. PMID:34078888
Differential gene expression in Drosophila melanogaster and D. nigrosparsa infected with the same Wolbachia strain. PMID:34059765
Alcohol-induced aggression in Drosophila. PMID:34044470
The Drosophila brain on cocaine at single-cell resolution. PMID:34035044
A comparative genomic approach using mouse and fruit fly data to discover genes involved in testis function in hymenopterans with a focus on Nasonia vitripennis. PMID:34011283
CG6015 controls spermatogonia transit-amplifying divisions by epidermal growth factor receptor signaling in Drosophila testes. PMID:33990549
Parallel and population-specific gene regulatory evolution in cold-adapted fly populations. PMID:33989401
The regulatory genome of the malaria vector Anopheles gambiae: integrating chromatin accessibility and gene expression. PMID:33987532
Analysis of Zika virus capsid-Aedes aegypti mosquito interactome reveals pro-viral host factors critical for establishing infection. PMID:33986255
piRNA-mediated gene regulation and adaptation to sex-specific transposon expression in D. melanogaster male germline. PMID:33985970
ZebraShare: a new venue for rapid dissemination of zebrafish mutant data. PMID:33954026
Gene Coexpression Network Reveals Highly Conserved, Well-Regulated Anti-Ageing Mechanisms in Old Ant Queens. PMID:33944936
Transcriptomic Signatures of Ageing Vary in Solitary and Social Forms of an Orchid Bee. PMID:33914875
An insulator blocks access to enhancers by an illegitimate promoter, preventing repression by transcriptional interference. PMID:33901190
Drosophila female reproductive tract gene expression reveals coordinated mating responses and rapidly evolving tissue-specific genes. PMID:33890615
Developmental Transcriptomics Reveals a Gene Network Driving Mimetic Color Variation in a Bumble Bee. PMID:33881508
Genetic basis of offspring number-body weight tradeoff in Drosophila melanogaster. PMID:33871609
Identification of new Anopheles gambiae transcriptional enhancers using a cross-species prediction approach. PMID:33866636
The mode of expression divergence in Drosophila fat body is infection-specific. PMID:33858842
A combined RAD-Seq and WGS approach reveals the genomic basis of yellow color variation in bumble bee Bombus terrestris. PMID:33846496
A Superfamily-wide Activity Atlas of Serine Hydrolases in Drosophila melanogaster. PMID:33827210
The UDP-Glycosyltransferase Family in Drosophila melanogaster: Nomenclature Update, Gene Expression and Phylogenetic Analysis. PMID:33815151
MolluscDB: a genome and transcriptome database for molluscs. PMID:33813885
PKC98E Regulates Odorant Responses in Drosophila melanogaster. PMID:33789918
Asterix/Gtsf1 links tRNAs and piRNA silencing of retrotransposons. PMID:33789107
Transcriptomic analyses of the termite, Cryptotermes secundus, reveal a gene network underlying a long lifespan and high fecundity. PMID:33753888
Differential Requirements for Mediator Complex Subunits in Drosophila melanogaster Host Defense Against Fungal and Bacterial Pathogens. PMID:33746938
A high-quality, chromosome-level genome assembly of the Black Soldier Fly (Hermetia illucens L.). PMID:33734373
Differential gene expression in a tripartite interaction: Drosophila, Spiroplasma and parasitic wasps. PMID:33717711
Methods and tools for spatial mapping of single-cell RNAseq clusters in Drosophila. PMID:33713129
Orphan nuclear receptor ftz-f1 (NR5A3) promotes egg chamber survival in the Drosophila ovary. PMID:33693603
An RNAi screen of the kinome in epithelial follicle cells of the Drosophila melanogaster ovary reveals genes required for proper germline death and clearance. PMID:33693600
Characterizing the genetic basis of copper toxicity in Drosophila reveals a complex pattern of allelic, regulatory, and behavioral variation. PMID:33683361
Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects. PMID:33678016
The effect of environmental stress on ageing in a termite species with low social complexity. PMID:33678015
GWAS reveal a role for the central nervous system in regulating weight and weight change in response to exercise. PMID:33664357
Hedgehog signaling and Tre1 regulate actin dynamics through PI(4,5)P2 to direct migration of Drosophila embryonic germ cells. PMID:33657369
An update of KAIKObase, the silkworm genome database. PMID:33645624
The assembled and annotated genome of the pigeon louse Columbicola columbae, a model ectoparasite. PMID:33604673
Behavioral and Genomic Sensory Adaptations Underlying the Pest Activity of Drosophila suzukii. PMID:33586767
Molecular principles of Piwi-mediated cotranscriptional silencing through the dimeric SFiNX complex. PMID:33574069
Functional Diversification, Redundancy, and Epistasis among Paralogs of the Drosophila melanogaster Obp50a-d Gene Cluster. PMID:33560417
Global adaptation complicates the interpretation of genome scans for local adaptation. PMID:33552532
In-silico definition of the Drosophila melanogaster matrisome. PMID:33543012
Drosophila oocyte proteome composition covaries with female mating status. PMID:33542461
Considerations for mosquito microbiome research from the Mosquito Microbiome Consortium. PMID:33522965
A benchmark and an algorithm for detecting germline transposon insertions and measuring de novo transposon insertion frequencies. PMID:33511407
The conserved alternative splicing factor caper regulates neuromuscular phenotypes during development and aging. PMID:33508255
Genomics Reveals the Origins of Historical Specimens. PMID:33502509
Transcription Factors Drive Opposite Relationships between Gene Age and Tissue Specificity in Male and Female Drosophila Gonads. PMID:33481021
B.2.16 is a non-lethal modifier of the Dark82 mosaic eye phenotype in Drosophila melanogaster. PMID:33474526
Wing serial homologues and the diversification of insect outgrowths: insights from the pupae of scarab beetles. PMID:33467999
A novel terpene synthase controls differences in anti-aphrodisiac pheromone production between closely related Heliconius butterflies. PMID:33465061
Female-biased upregulation of insulin pathway activity mediates the sex difference in Drosophila body size plasticity. PMID:33448263
Intracellular Density of Wolbachia Is Mediated by Host Autophagy and the Bacterial Cytoplasmic Incompatibility Gene cifB in a Cell Type-Dependent Manner in Drosophila melanogaster. PMID:33436431
A pathway for error-free non-homologous end joining of resected meiotic double-strand breaks. PMID:33406239
Soft Selective Sweep on Chemosensory Genes Correlates with Ancestral Preference for Toxic Noni in a Specialist Drosophila Population. PMID:33383708
The Drosophila E78 nuclear receptor regulates dietary triglyceride uptake and systemic lipid levels. PMID:33368768
Chromatin Structure and Function in Mosquitoes. PMID:33365050
Crosstalk between vrille transcripts, proteins, and regulatory elements controlling circadian rhythms and development in Drosophila. PMID:33364582
Constitutive activation of cellular immunity underlies the evolution of resistance to infection in Drosophila. PMID:33357377
Temperature, rainfall and wind variables underlie environmental adaptation in natural populations of Drosophila melanogaster. PMID:33350518
Individual differences in honey bee behavior enabled by plasticity in brain gene regulatory networks. PMID:33350385
Telomeric TART elements target the piRNA machinery in Drosophila. PMID:33347429
The lncRNA Toolkit: Databases and In Silico Tools for lncRNA Analysis. PMID:33339309
CRISPR/Cas9 knockout of female-biased genes AeAct-4 or myo-fem in Ae. aegypti results in a flightless phenotype in female, but not male mosquitoes. PMID:33338046
PseudoBase: a genomic visualization and exploration resource for the Drosophila pseudoobscura subgroup. PMID:33319644
Degradation of arouser by endosomal microautophagy is essential for adaptation to starvation in Drosophila. PMID:33318080
Diverse cellular morphologies during lumen maturation in Anopheles gambiae larval salivary glands. PMID:33305876
Cytosolic calcium regulates cytoplasmic accumulation of TDP-43 through Calpain-A and Importin α3. PMID:33305734
Pioneer-like factor GAF cooperates with PBAP (SWI/SNF) and NURF (ISWI) to regulate transcription. PMID:33303640
Exploiting codon usage identifies intensity-specific modifiers of Ras/MAPK signaling in vivo. PMID:33296356
Planar cell polarity in the larval epidermis of Drosophila and the role of microtubules. PMID:33295841
3D genome evolution and reorganization in the Drosophila melanogaster species group. PMID:33284803
In silico identification of Drosophila melanogaster genes encoding RNA polymerase subunits. PMID:33274328
Poly(ADP-ribose) polymerase 1 in genome-wide expression control in Drosophila. PMID:33273587
An original infection model identifies host lipoprotein import as a route for blood-brain barrier crossing. PMID:33257684
Mosquito genomes are frequently invaded by transposable elements through horizontal transfer. PMID:33253164
Tirant Stealthily Invaded Natural Drosophila melanogaster Populations during the Last Century. PMID:33247725
Major SCP/TAPS protein expansion in Lucilia cuprina is associated with novel tandem array organisation and domain architecture. PMID:33246493
FlyBase: updates to the Drosophila melanogaster knowledge base. PMID:33219682
The homeodomain transcription factor Orthopedia is involved in development of the Drosophila hindgut. PMID:33213520
Persistent epigenetic reprogramming of sweet taste by diet. PMID:33177090
Deciphering cell-cell interactions and communication from gene expression. PMID:33168968
The Broad Transcription Factor Links Hormonal Signaling, Gene Expression, and Cellular Morphogenesis Events During Drosophila Imaginal Disc Development. PMID:33115752
The evolution of insect metallothioneins. PMID:33109013
RNAcentral 2021: secondary structure integration, improved sequence search and new member databases. PMID:33106848
SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. PMID:33106474
FlyRNAi.org-the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update. PMID:33104800
The Influence of Chromosomal Environment on X-Linked Gene Expression in Drosophila melanogaster. PMID:33104185
Identification, expression, and artificial selection of silkworm epigenetic modification enzymes. PMID:33096977
OGEE v3: Online GEne Essentiality database with increased coverage of organisms and human cell lines. PMID:33084874
Mitochondrial-Y chromosome epistasis in Drosophila melanogaster. PMID:33081607
The BioGRID database: A comprehensive biomedical resource of curated protein, genetic, and chemical interactions. PMID:33070389
Genetic background impacts the timing of synaptonemal complex breakdown in Drosophila melanogaster. PMID:33068154
The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals. PMID:33037820
Loss of Pseudouridine Synthases in the RluA Family Causes Hypersensitive Nociception in Drosophila. PMID:33028630
Regulatory gene function handoff allows essential gene loss in mosquitoes. PMID:32999445
Rosy Beginnings: Studying Peroxisomes in Drosophila. PMID:32984330
Transposon expression in the Drosophila brain is driven by neighboring genes and diversifies the neural transcriptome. PMID:32973040
Large-scale RNAi screening uncovers therapeutic targets in the parasite Schistosoma mansoni. PMID:32973031
Review on the Computational Genome Annotation of Sequences Obtained by Next-Generation Sequencing. PMID:32962098
Defining the Boundaries of Polycomb Domains in Drosophila. PMID:32948625
Unraveling the Genetic Basis for the Rapid Diversification of Male Genitalia between Drosophila Species. PMID:32931587
Drosophila Voltage-Gated Sodium Channels Are Only Expressed in Active Neurons and Are Localized to Distal Axonal Initial Segment-like Domains. PMID:32928889
The Neuroanatomical Ultrastructure and Function of a Biological Ring Attractor. PMID:32916090
A conserved myotubularin-related phosphatase regulates autophagy by maintaining autophagic flux. PMID:32915229
The Drosophila CG1674 gene encodes a synaptopodin 2-like related protein that localizes to the Z-disc and is required for normal flight muscle development and function. PMID:32893414
Analysis of insect nuclear small heat shock proteins and interacting proteins. PMID:32888179
Amalgam regulates the receptor tyrosine kinase pathway through Sprouty in glial cell development in the Drosophila larval brain. PMID:32878945
Development and Analysis of a Quantitative Mathematical Model of Bistability in the Cross Repression System Between APT and SLBO Within the JAK/STAT Signaling Pathway. PMID:32848815
A cell atlas of adult muscle precursors uncovers early events in fibre-type divergence in Drosophila. PMID:32815271
Ribosomal proteins: mutant phenotypes by the numbers and associated gene expression changes. PMID:32810425
Insights into HP1a-Chromatin Interactions. PMID:32784937
Genome-wide transcriptional effects of deletions of sulphur metabolism genes in Drosophila melanogaster. PMID:32769010
Differential neuropeptide modulation of premotor and motor neurons in the lobster cardiac ganglion. PMID:32755328
Genomic analyses of a livestock pest, the New World screwworm, find potential targets for genetic control programs. PMID:32753684
Evolutionarily Conserved Roles for Apontic in Induction and Subsequent Decline of Cyclin E Expression. PMID:32736066
Extensive Recombination Suppression and Epistatic Selection Causes Chromosome-Wide Differentiation of a Selfish Sex Chromosome in Drosophila pseudoobscura. PMID:32732371
Insulin signaling requires glucose to promote lipid anabolism in adipocytes. PMID:32723868
Histone Deacetylase 11 Knockdown Blocks Larval Development and Metamorphosis in the Red Flour Beetle, Tribolium castaneum. PMID:32719718
Identification of New Regulators of the Oocyte-to-Embryo Transition in Drosophila. PMID:32690584
Characterization of a dual-action adulticidal and larvicidal interfering RNA pesticide targeting the Shaker gene of multiple disease vector mosquitoes. PMID:32687496
Pathogenic Tau Causes a Toxic Depletion of Nuclear Calcium. PMID:32668249
The Theory and Applications of Measuring Broad-Range and Chromosome-Wide Recombination Rate from Allele Frequency Decay around a Selected Locus. PMID:32658965
Integrating GWAS and Transcriptomics to Identify the Molecular Underpinnings of Thermal Stress Responses in Drosophila melanogaster. PMID:32655626
The Classic Lobe Eye Phenotype of Drosophila Is Caused by Transposon Insertion-Induced Misexpression of a Zinc-Finger Transcription Factor. PMID:32641295
Limited influence of the microbiome on the transcriptional profile of female Aedes aegypti mosquitoes. PMID:32616765
Drosophila GFAT1 and GFAT2 enzymes encode obligate developmental functions. PMID:32615907
CrebA increases secretory capacity through direct transcriptional regulation of the secretory machinery, a subset of secretory cargo, and other key regulators. PMID:32613751
Abnormal Social Interactions in a Drosophila Mutant of an Autism Candidate Gene: Neuroligin 3. PMID:32610435
Measuring Genome Sizes Using Read-Depth, k-mers, and Flow Cytometry: Methodological Comparisons in Beetles (Coleoptera). PMID:32601059
Expansions of chemosensory gene orthologs among selected tsetse fly species and their expressions in Glossina morsitans morsitans tsetse fly. PMID:32589659
The E2 Marie Kondo and the CTLH E3 ligase clear deposited RNA binding proteins during the maternal-to-zygotic transition. PMID:32573431
Automated generation of gene summaries at the Alliance of Genome Resources. PMID:32559296
Regulation of epithelial integrity and organ growth by Tctp and Coracle in Drosophila. PMID:32559217
The evolution of sex-biased gene expression in the Drosophila brain. PMID:32554780
An Interaction Network of RNA-Binding Proteins Involved in Drosophila Oogenesis. PMID:32554711
Splice2Deep: An ensemble of deep convolutional neural networks for improved splice site prediction in genomic DNA. PMID:32550561
fs(1)A13041 is a 5' UTR deletion of the essential gene small ovary in Drosophila. PMID:32550484
The GTPase-activating protein p120RasGAP has an evolutionarily conserved "FLVR-unique" SH2 domain. PMID:32540970
State-of-the-Art Technology of Model Organisms for Current Human Medicine. PMID:32532032
Multi-branch Convolutional Neural Network for Identification of Small Non-coding RNA genomic loci. PMID:32528107
More Than One-to-Four via 2R: Evidence of an Independent Amphioxus Expansion and Two-Gene Ancestral Vertebrate State for MyoD-Related Myogenic Regulatory Factors (MRFs). PMID:32520990
GWAS for Lifespan and Decline in Climbing Ability in Flies upon Dietary Restriction Reveal decima as a Mediator of Insulin-like Peptide Production. PMID:32502405
Different genetic basis for alcohol dehydrogenase activity and plasticity in a novel alcohol environment for Drosophila melanogaster. PMID:32483318
Long-Term Dynamics Among Wolbachia Strains During Thermal Adaptation of Their Drosophila melanogaster Hosts. PMID:32477411
Cbl-Associated Protein CAP contributes to correct formation and robust function of the Drosophila heart tube. PMID:32469960
Macrophages Use Distinct Actin Regulators to Switch Engulfment Strategies and Ensure Phagocytic Plasticity In Vivo. PMID:32460022
The features of polyglutamine regions depend on their evolutionary stability. PMID:32448113
A single-cell survey of Drosophila blood. PMID:32396065
Co-evolving wing spots and mating displays are genetically separable traits in Drosophila. PMID:32363590
Alignment- and reference-free phylogenomics with colored de Bruijn graphs. PMID:32280365
Mob Family Proteins: Regulatory Partners in Hippo and Hippo-Like Intracellular Signaling Pathways. PMID:32266255
Using multiple reference genomes to identify and resolve annotation inconsistencies. PMID:32264824
Essential gene prediction in Drosophila melanogaster using machine learning approaches based on sequence and functional features. PMID:32257045
Conservation and divergence of related neuronal lineages in the Drosophila central brain. PMID:32255422
A Continuum of Evolving De Novo Genes Drives Protein-Coding Novelty in Drosophila. PMID:32253450
A combinatorial code of transcription factors specifies subtypes of visual motion-sensing neurons in Drosophila. PMID:32238425
A naturally-occurring 22-bp coding deletion in Ugt86Dd reduces nicotine resistance in Drosophila melanogaster. PMID:32228671
Whole Genome Sequences of 23 Species from the Drosophila montium Species Group (Diptera: Drosophilidae): A Resource for Testing Evolutionary Hypotheses. PMID:32220952
Assessment and comparison of putative amine receptor complement/diversity in the brain and eyestalk ganglia of the lobster, Homarus americanus. PMID:32215729
Neuronal upregulation of Prospero protein is driven by alternative mRNA polyadenylation and Syncrip-mediated mRNA stabilisation. PMID:32205310
Dynamic Evolution of Euchromatic Satellites on the X Chromosome in Drosophila melanogaster and the simulans Clade. PMID:32191304
Homeodomain-interacting protein kinase (Hipk) plays roles in nervous system and muscle structure and function. PMID:32187190
Text mining meets community curation: a newly designed curation platform to improve author experience and participation at WormBase. PMID:32185395
Drp1-mediated mitochondrial fission regulates calcium and F-actin dynamics during wound healing. PMID:32184231
Methods detecting rhythmic gene expression are biologically relevant only for strong signal. PMID:32182235
Characterization of an adulticidal and larvicidal interfering RNA pesticide that targets a conserved sequence in mosquito G protein-coupled dopamine 1 receptor genes. PMID:32169582
The receptor tyrosine kinase Ror is required for dendrite regeneration in Drosophila neurons. PMID:32163406
Sertraline induces DNA damage and cellular toxicity in Drosophila that can be ameliorated by antioxidants. PMID:32161356
Adult Movement Defects Associated with a CORL Mutation in Drosophila Display Behavioral Plasticity. PMID:32161085
Ancient evolutionary signals of protein-coding sequences allow the discovery of new genes in the Drosophila melanogaster genome. PMID:32138644
Pits and CtBP Control Tissue Growth in Drosophila melanogaster with the Hippo Pathway Transcription Repressor Tgi. PMID:32122936
In silico analyses suggest the cardiac ganglion of the lobster, Homarus americanus, contains a diverse array of putative innexin/innexin-like proteins, including both known and novel members of this protein family. PMID:32115669
Predicted Drosophila Interactome Resource and web tool for functional interpretation of differentially expressed genes. PMID:32103267
Long non-coding RNAs in development and disease: conservation to mechanisms. PMID:32100288
Dissecting Fertility Functions of Drosophila Y Chromosome Genes with CRISPR. PMID:32098759
Meta-analysis of honey bee neurogenomic response links Deformed wing virus type A to precocious behavioral maturation. PMID:32080242
Embryonic development and secondary axis induction in the Brazilian white knee tarantula Acanthoscurria geniculata, C. L. Koch, 1841 (Araneae; Mygalomorphae; Theraphosidae). PMID:32076811
Large-Scale Transgenic Drosophila Resource Collections for Loss- and Gain-of-Function Studies. PMID:32071193
NCBP2 modulates neurodevelopmental defects of the 3q29 deletion in Drosophila and Xenopus laevis models. PMID:32053595
Age-dependent expression profiles of two adaptogenic systems and thermotolerance in Drosophila melanogaster. PMID:32040825
Candidate gene screen for potential interaction partners and regulatory targets of the Hox gene labial in the spider Parasteatoda tepidariorum. PMID:32036446
ESCRT-III-mediated membrane fusion drives chromosome fragments through nuclear envelope channels. PMID:32032426
"What You Need, Baby, I Got It": Transposable Elements as Suppliers of Cis-Operating Sequences in Drosophila. PMID:32028630
Genetic Variation and Potential for Resistance Development to the tTA Overexpression Lethal System in Insects. PMID:32019873
Identification of putative neuropeptidergic signaling systems in the spiny lobster, Panulirus argus. PMID:31980901
Improved Genome Assembly and Annotation of the Soybean Aphid (Aphis glycines Matsumura). PMID:31969427
A role for triglyceride lipase brummer in the regulation of sex differences in Drosophila fat storage and breakdown. PMID:31961851
Tripal EUtils: a Tripal module to increase exchange and reuse of genome assembly metadata. PMID:31960040
Building a pipeline to solicit expert knowledge from the community to aid gene summary curation. PMID:31960022
Making sense out of missense mutations: Mechanistic dissection of Notch receptors through structure-function studies in Drosophila. PMID:31943162
Imp/IGF2BP levels modulate individual neural stem cell growth and division through myc mRNA stability. PMID:31934860
The DNA polymerases of Drosophila melanogaster. PMID:31933406
Dysregulation of antimicrobial peptide expression distinguishes Alzheimer's disease from normal aging. PMID:31907335
Molecular characterization and distribution of the voltage-gated sodium channel, Para, in the brain of the grasshopper and vinegar fly. PMID:31902005
Use of the CRISPR-Cas9 System in Drosophila Cultured Cells to Introduce Fluorescent Tags into Endogenous Genes. PMID:31869524
Adaptation of Translational Machinery in Malaria Parasites to Accommodate Translation of Poly-Adenosine Stretches Throughout Its Life Cycle. PMID:31866984
SGID: a comprehensive and interactive database of the silkworm. PMID:31836898
The Emerging Role of Gβ Subunits in Human Genetic Diseases. PMID:31817184
mitoXplorer, a visual data mining platform to systematically analyze and visualize mitochondrial expression dynamics and mutations. PMID:31799603
A truncated form of a transcription factor Mamo activates vasa in Drosophila embryos. PMID:31799425
The Alliance of Genome Resources: Building a Modern Data Ecosystem for Model Organism Databases. PMID:31796553
Loss of Oxidation Resistance 1, OXR1, Is Associated with an Autosomal-Recessive Neurological Disease with Cerebellar Atrophy and Lysosomal Dysfunction. PMID:31785787
Nanopore sequencing and Hi-C scaffolding provide insight into the evolutionary dynamics of transposable elements and piRNA production in wild strains of Drosophila melanogaster. PMID:31754714
ChiTaRS 5.0: the comprehensive database of chimeric transcripts matched with druggable fusions and 3D chromatin maps. PMID:31747015
Nitric oxide acts as a cotransmitter in a subset of dopaminergic neurons to diversify memory dynamics. PMID:31724947
The Year of the Rat: The Rat Genome Database at 20: a multi-species knowledgebase and analysis platform. PMID:31713623
New developments on the Encyclopedia of DNA Elements (ENCODE) data portal. PMID:31713622
Drosophila PSI controls circadian period and the phase of circadian behavior under temperature cycle via tim splicing. PMID:31702555
The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species. PMID:31701156
A Burst of Genetic Innovation in Drosophila Actin-Related Proteins for Testis-Specific Function. PMID:31697328
An efficient CRISPR-based strategy to insert small and large fragments of DNA using short homology arms. PMID:31674908
Double triage to identify poorly annotated genes in maize: The missing link in community curation. PMID:31658277
A Functional Analysis of the Drosophila Gene hindsight: Evidence for Positive Regulation of EGFR Signaling. PMID:31649045
Centromeric SMC1 promotes centromere clustering and stabilizes meiotic homolog pairing. PMID:31609962
Alliance of Genome Resources Portal: unified model organism research platform. PMID:31552413
Identification of putative amine receptor complement in the eyestalk of the crayfish, Procambarus clarkii. PMID:31549228
Mamo decodes hierarchical temporal gradients into terminal neuronal fate. PMID:31545163
Molecular Profiling of the Drosophila Antenna Reveals Conserved Genes Underlying Olfaction in Insects. PMID:31527046
Using MARRVEL v1.2 for Bioinformatics Analysis of Human Genes and Variant Pathogenicity. PMID:31524990
Distinct RhoGEFs Activate Apical and Junctional Contractility under Control of G Proteins during Epithelial Morphogenesis. PMID:31522942
Low complexity regions in the proteins of prokaryotes perform important functional roles and are highly conserved. PMID:31504783
Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information. PMID:31475990
The Transcription Factor Elf3 Is Essential for a Successful Mesenchymal to Epithelial Transition. PMID:31404945
A standardized nomenclature and atlas of the male terminalia of Drosophila melanogaster. PMID:31401934
Role of p53 isoforms in the DNA damage response during Drosophila oogenesis. PMID:31391501
Combover interacts with the axonemal component Rsp3 and is required for Drosophila sperm individualization. PMID:31391193
An RNAi Screen for Genes Required for Growth of Drosophila Wing Tissue. PMID:31387856
The chromosomes of Drosophila suzukii (Diptera: Drosophilidae): detailed photographic polytene chromosomal maps and in situ hybridization data. PMID:31346719
Centromere-Proximal Meiotic Crossovers in Drosophila melanogaster Are Suppressed by Both Highly Repetitive Heterochromatin and Proximity to the Centromere. PMID:31345993
Tripal v3: an ontology-based toolkit for construction of FAIR biological community databases. PMID:31328773
Identification of putative amine biosynthetic enzymes in the nervous system of the crab, Cancer borealis. PMID:31263964
Role of tbc1 in Drosophila embryonic salivary glands. PMID:31242864
The fruit fly at the interface of diagnosis and pathogenic mechanisms of rare and common human diseases. PMID:31227826
Proximity labeling reveals novel interactomes in live Drosophila tissue. PMID:31208963
Diverse families of transposable elements affect the transcriptional regulation of stress-response genes in Drosophila melanogaster. PMID:31175824
Immediate Transcriptional Response to a Temperature Pulse under a Fluctuating Thermal Regime. PMID:31173075
The dPix-Git complex is essential to coordinate epithelial morphogenesis and regulate myosin during Drosophila egg chamber development. PMID:31116733
Multiple genetic loci affect place learning and memory performance in Drosophila melanogaster. PMID:31095869
iMKT: the integrative McDonald and Kreitman test. PMID:31081014
Two modes of transvection at the eyes absent gene of Drosophila demonstrate plasticity in transcriptional regulatory interactions in cis and in trans. PMID:31075100
modEnrichr: a suite of gene set enrichment analysis tools for model organisms. PMID:31069376
Meiotic MCM Proteins Promote and Inhibit Crossovers During Meiotic Recombination. PMID:31028111
Evolution of Mutator transposable elements across eukaryotic diversity. PMID:30988700
Adenine Methylation in Drosophila Is Associated with the Tissue-Specific Expression of Developmental and Regulatory Genes. PMID:30988038
Population Genetic and Functional Analysis of a cis-Regulatory Polymorphism in the Drosophila melanogaster Metallothionein A gene. PMID:30769915
The 26th annual Nucleic Acids Research database issue and Molecular Biology Database Collection. PMID:30626175
Improving the Gene Ontology Resource to Facilitate More Informative Analysis and Interpretation of Alzheimer's Disease Data. PMID:30501127
FlyBase at 25: looking to the future PubMed citations: 304.

304 articles citing: FlyBase at 25: looking to the future

Pseudocleavage furrows restrict plasma membrane-associated PH domain in syncytial Drosophila embryos. PMID:35591789
Dynamics of sex-biased gene expression during development in the stick insect Timema californicum. PMID:35581477
Population-scale long-read sequencing uncovers transposable elements associated with gene expression variation and adaptive signatures in Drosophila. PMID:35413957
Glial immune-related pathways mediate effects of closed head traumatic brain injury on behavior and lethality in Drosophila. PMID:35081110
Endoplasmic reticulum-translocation is essential for APOL1 cellular toxicity. PMID:35072009
Metabolic Processes Are Differentially Regulated During Wild-Type and Attenuated Dengue Virus Infection in Aedes aegypti. PMID:35008057
Decoding gene regulation in the fly brain. PMID:34987221
DamID transcriptional profiling identifies the Snail/Scratch transcription factor Kahuli as an Alk target in the Drosophila visceral mesoderm. PMID:34905617
Dia- and Rok-dependent enrichment of capping proteins in a cortical region. PMID:34633047
The Drosophila Baramicin polypeptide gene protects against fungal infection. PMID:34432851
Finding differentially expressed sRNA-Seq regions with srnadiff. PMID:34415926
Sexual Antagonism, Temporally Fluctuating Selection, and Variable Dominance Affect a Regulatory Polymorphism in Drosophila melanogaster. PMID:34289067
The H3.3K27M oncohistone antagonizes reprogramming in Drosophila. PMID:34280185
Databases for Protein-Protein Interactions. PMID:34236665
Automated generation of context-specific gene regulatory networks with a weighted approach in Drosophila melanogaster. PMID:34123358
Gene expression and alternative splicing dynamics are perturbed in female head transcriptomes following heterospecific copulation. PMID:34006224
The genomic basis of evolutionary differentiation among honey bees. PMID:33947700
Proteomics of protein trafficking by in vivo tissue-specific labeling. PMID:33888706
Tissue-specific modulation of gene expression in response to lowered insulin signalling in Drosophila. PMID:33879316
Genetic Mapping of a new Hippo allele, HpoN.1.2, in Drosophila melanogaster. PMID:33851093
Adaptation of codon and amino acid use for translational functions in highly expressed cricket genes. PMID:33823803
The nuclear to cytoplasmic ratio directly regulates zygotic transcription in Drosophila through multiple modalities. PMID:33790005
Ultra-conserved sequences in the genomes of highly diverse Anopheles mosquitoes, with implications for malaria vector control. PMID:33730159
Control of Cell Growth and Proliferation by the Tribbles Pseudokinase: Lessons from Drosophila. PMID:33672471
GWAS reveal a role for the central nervous system in regulating weight and weight change in response to exercise. PMID:33664357
Biological impact of mutually exclusive exon switching. PMID:33651795
Rapid divergence of the male reproductive proteins in the Drosophila dunni group and implications for postmating incompatibilities between species. PMID:33599779
B.2.16 is a non-lethal modifier of the Dark82 mosaic eye phenotype in Drosophila melanogaster. PMID:33474526
Dis3L2 regulates cell proliferation and tissue growth through a conserved mechanism. PMID:33370287
Crosstalk between vrille transcripts, proteins, and regulatory elements controlling circadian rhythms and development in Drosophila. PMID:33364582
Reproductive consequences of an extra long-term sperm storage organ. PMID:33256600
A phylogenomic study of Steganinae fruit flies (Diptera: Drosophilidae): strong gene tree heterogeneity and evidence for monophyly. PMID:33138771
Leveraging Multiple Layers of Data To Predict Drosophila Complex Traits. PMID:33106232
Interactions between the microbiome and mating influence the female's transcriptional profile in Drosophila melanogaster. PMID:33097776
Genome streamlining in a minute herbivore that manipulates its host plant. PMID:33095158
Adaptation, ancestral variation and gene flow in a 'Sky Island' Drosophila species. PMID:33089581
Drosophila R8 photoreceptor cell subtype specification requires hibris. PMID:33052948
Functional Transcription Factor Target Networks Illuminate Control of Epithelial Remodelling. PMID:33007944
Validating the Potential of Double-Stranded RNA Targeting Colorado Potato Beetle Mesh Gene in Laboratory and Field Trials. PMID:32973826
A functionally defined high-density NRF2 interactome reveals new conditional regulators of ARE transactivation. PMID:32911434
Topology-driven protein-protein interaction network analysis detects genetic sub-networks regulating reproductive capacity. PMID:32901612
JNK pathway restricts DENV2, ZIKV and CHIKV infection by activating complement and apoptosis in mosquito salivary glands. PMID:32776975
SPOCD1 is an essential executor of piRNA-directed de novo DNA methylation. PMID:32674113
Transcytosis via the late endocytic pathway as a cell morphogenetic mechanism. PMID:32657472
A Nucleolar Isoform of the Drosophila Ubiquitin Specific Protease dUSP36 Regulates MYC-Dependent Cell Growth. PMID:32637412
Survey for positively selected coding regions in the genome of the hematophagous tsetse fly Glossina morsitans identifies candidate genes associated with feeding habits and embryonic development. PMID:32555940
Overlapping but Distinct Sequences Play Roles in the Insulator and Promoter Activities of the Drosophila BEAF-Dependent scs' Insulator. PMID:32554599
Genetic mapping of EgfrL.3.1 in Drosophila melanogaster. PMID:32550448
Genetic mapping of shnE.3.2 in Drosophila melanogaster. PMID:32550446
The mapping of Drosophila melanogaster mutant A.4.4. PMID:32550366
Adaptive evolution among cytoplasmic piRNA proteins leads to decreased genomic auto-immunity. PMID:32525870
Identification of genomic enhancers through spatial integration of single-cell transcriptomics and epigenomics. PMID:32431014
The metabolome as a link in the genotype-phenotype map for peroxide resistance in the fruit fly, Drosophila melanogaster. PMID:32366330
Hyd ubiquitinates the NF-κB co-factor Akirin to operate an effective immune response in Drosophila. PMID:32339205
Retromer subunit, VPS29, regulates synaptic transmission and is required for endolysosomal function in the aging brain. PMID:32286230
Fluorescence fluctuation analysis reveals PpV dependent Cdc25 protein dynamics in living embryos. PMID:32251417
Coordination of cytoskeletal dynamics and cell behaviour during Drosophila abdominal morphogenesis. PMID:32229579
The conserved regulatory basis of mRNA contributions to the early Drosophila embryo differs between the maternal and zygotic genomes. PMID:32226006
The fruitless gene affects female receptivity and species isolation. PMID:32208837
Exfoliated near infrared fluorescent silicate nanosheets for (bio)photonics. PMID:32198383
Promoter-Proximal Chromatin Domain Insulator Protein BEAF Mediates Local and Long-Range Communication with a Transcription Factor and Directly Activates a Housekeeping Promoter in Drosophila. PMID:32179582
Gene expression networks in the Drosophila Genetic Reference Panel. PMID:32144088
A cnidarian parasite of salmon (Myxozoa: Henneguya) lacks a mitochondrial genome. PMID:32094163
Drosophila Interspecific Hybridization Causes A Deregulation of the piRNA Pathway Genes. PMID:32092860
Hybrid dysgenesis in Drosophila virilis results in clusters of mitotic recombination and loss-of-heterozygosity but leaves meiotic recombination unaltered. PMID:32082426
Transposable elements contribute to the genomic response to insecticides in Drosophila melanogaster. PMID:32075557
Field cricket genome reveals the footprint of recent, abrupt adaptation in the wild. PMID:32055408
Identification of the molecular components of a putative Jasus edwardsii (Crustacea; Decapoda; Achelata) circadian signaling system. PMID:32048048
An early endosome-derived retrograde trafficking pathway promotes secretory granule maturation. PMID:32045479
Genetic Variation and Potential for Resistance Development to the tTA Overexpression Lethal System in Insects. PMID:32019873
The mirtron miR-1010 functions in concert with its host gene SKIP to balance elevation of nAcRβ2. PMID:32015391
Genetic Networks Underlying Natural Variation in Basal and Induced Activity Levels in Drosophila melanogaster. PMID:32014853
Eukaryotic transcription factors can track and control their target genes using DNA antennas. PMID:31992709
Absence of a Faster-X Effect in Beetles (Tribolium, Coleoptera). PMID:31988160
Towards a synthesis of the Caribbean biogeography of terrestrial arthropods. PMID:31980017
Enhanced genome assembly and a new official gene set for Tribolium castaneum. PMID:31937263
Sex Chromosome Pairing Mediated by Euchromatic Homology in Drosophila Male Meiosis. PMID:31915134
The X chromosome of the German cockroach, Blattella germanica, is homologous to a fly X chromosome despite 400 million years divergence. PMID:31806031
The Loci of Behavioral Evolution: Evidence That Fas2 and tilB Underlie Differences in Pupation Site Choice Behavior between Drosophila melanogaster and D. simulans. PMID:31774527
BmBlimp-1 gene encoding a C2H2 zinc finger protein is required for wing development in the silkworm Bombyx mori. PMID:31754338
FlySilico: Flux balance modeling of Drosophila larval growth and resource allocation. PMID:31748517
The Genetics of Male Pheromone Preference Difference Between Drosophila melanogaster and Drosophila simulans. PMID:31748379
Myofibril diameter is set by a finely tuned mechanism of protein oligomerization in Drosophila. PMID:31746737
Extension modules for storage, visualization and querying of genomic, genetic and breeding data in Tripal databases. PMID:31725859
A Burst of Genetic Innovation in Drosophila Actin-Related Proteins for Testis-Specific Function. PMID:31697328
In vivo optochemical control of cell contractility at single-cell resolution. PMID:31663248
Genomic analysis of the four ecologically distinct cactus host populations of Drosophila mojavensis. PMID:31606030
Tau-Mediated Disruption of the Spliceosome Triggers Cryptic RNA Splicing and Neurodegeneration in Alzheimer's Disease. PMID:31597093
Patterns and Constraints in the Evolution of Sperm Individualization Genes in Insects, with an Emphasis on Beetles. PMID:31590243
HELZ directly interacts with CCR4-NOT and causes decay of bound mRNAs. PMID:31570513
Forward genetic screen in human podocytes identifies diphthamide biosynthesis genes as regulators of adhesion. PMID:31566424
Drosophila Heterochromatin Stabilization Requires the Zinc-Finger Protein Small Ovary. PMID:31558581
Accurate genome-wide predictions of spatio-temporal gene expression during embryonic development. PMID:31553718
Gephebase, a database of genotype-phenotype relationships for natural and domesticated variation in Eukaryotes. PMID:31544935
Comparative Transcriptomics Provides Insights into Reticulate and Adaptive Evolution of a Butterfly Radiation. PMID:31518398
Salvador-Warts-Hippo pathway regulates sensory organ development via caspase-dependent nonapoptotic signaling. PMID:31511495
Rapid metabolic shifts occur during the transition between hunger and satiety in Drosophila melanogaster. PMID:31492856
Multiple Functions of the Essential Gene PpV in Drosophila Early Development. PMID:31484673
cindr, the Drosophila Homolog of the CD2AP Alzheimer's Disease Risk Gene, Is Required for Synaptic Transmission and Proteostasis. PMID:31412248
Ongoing hybridization obscures phylogenetic relationships in the Drosophila subquinaria species complex. PMID:31385638
The nascent RNA binding complex SFiNX licenses piRNA-guided heterochromatin formation. PMID:31384064
Nuclear RNA export factor variant initiates piRNA-guided co-transcriptional silencing. PMID:31368590
Conservation and flexibility in the gene regulatory landscape of heliconiine butterfly wings. PMID:31341608
Comparative transcriptomics suggest unique molecular adaptations within tardigrade lineages. PMID:31340759
DNA sequence models of genome-wide Drosophila melanogaster Polycomb binding sites improve generalization to independent Polycomb Response Elements. PMID:31340029
Recurrent gene co-amplification on Drosophila X and Y chromosomes. PMID:31329593
Genome-wide identification and expression profiling of the C2H2-type zinc finger protein genes in the silkworm Bombyx mori. PMID:31316872
Alcohol sedation in adult Drosophila is regulated by Cysteine proteinase-1 in cortex glia. PMID:31286069
The role of Patronin in Drosophila mitosis. PMID:31284878
Convergent Evidence From Humans and Drosophila melanogaster Implicates the Transcription Factor MEF2B/Mef2 in Alcohol Sensitivity. PMID:31241765
Network-based prediction of polygenic disease genes involved in cell motility. PMID:31216978
Convergent eusocial evolution is based on a shared reproductive groundplan plus lineage-specific plastic genes. PMID:31201311
Gene expression in Tribolium castaneum life stages: Identifying a species-specific target for pest control applications. PMID:31198628
Using genetics to understand biology. PMID:31189902
Specialized eRpL22 paralogue-specific ribosomes regulate specific mRNA translation in spermatogenesis in Drosophila melanogaster. PMID:31188709
Stem Cell Proliferation Is Kept in Check by the Chromatin Regulators Kismet/CHD7/CHD8 and Trr/MLL3/4. PMID:31112698
Transcriptomic basis and evolution of the ant nurse-larval social interactome. PMID:31107868
Unanchored ubiquitin chains do not lead to marked alterations in gene expression in Drosophila melanogaster. PMID:31097444
Intellectual disability and autism spectrum disorders 'on the fly': insights from Drosophila. PMID:31088981
Cell Cycle Kinase Polo Is Controlled by a Widespread 3' Untranslated Region Regulatory Sequence in Drosophila melanogaster. PMID:31085682
Drosophila anion exchanger 2 is required for proper ovary development and oogenesis. PMID:31071312
Comprehensive Genetic Characterization of Mitochondrial Ca2+ Uniporter Components Reveals Their Different Physiological Requirements In Vivo. PMID:31042479
An effective biomedical document classification scheme in support of biocuration: addressing class imbalance. PMID:31032839
Genome-wide sexually antagonistic variants reveal long-standing constraints on sexual dimorphism in fruit flies. PMID:31022179
A Comprehensive Drosophila melanogaster Transcription Factor Interactome. PMID:30995488
Studying alcohol use disorder using Drosophila melanogaster in the era of 'Big Data'. PMID:30992041
To what extent may peptide receptor gene diversity/complement contribute to functional flexibility in a simple pattern-generating neural network? PMID:30974344
ATAC-seq reveals regional differences in enhancer accessibility during the establishment of spatial coordinates in the Drosophila blastoderm. PMID:30962180
Metascape provides a biologist-oriented resource for the analysis of systems-level datasets. PMID:30944313
Rhodnius prolixus: Identification of missing components of the IMD immune signaling pathway and functional characterization of its role in eliminating bacteria. PMID:30943246
CRISPR Gene Drive Efficiency and Resistance Rate Is Highly Heritable with No Common Genetic Loci of Large Effect. PMID:30918006
A unique cluster of roo insertions in the promoter region of a stress response gene in Drosophila melanogaster. PMID:30911338
Drosophila mRNA Localization During Later Development: Past, Present, and Future. PMID:30899273
Drosophila p53 directs nonapoptotic programs in postmitotic tissue. PMID:30892991
A toolset to study functions of Cytosolic non-specific dipeptidase 2 (CNDP2) using Drosophila as a model organism. PMID:30885138
Long-read based assembly and synteny analysis of a reference Drosophila subobscura genome reveals signatures of structural evolution driven by inversions recombination-suppression effects. PMID:30885123
The Genome of Drosophila innubila Reveals Lineage-Specific Patterns of Selection in Immune Genes. PMID:30865231
The Caspase-3 homolog DrICE regulates endocytic trafficking during Drosophila tracheal morphogenesis. PMID:30833576
A Multivariate Genome-Wide Association Study of Wing Shape in Drosophila melanogaster. PMID:30792267
Selection shapes turnover and magnitude of sex-biased expression in Drosophila gonads. PMID:30786879
Stress response, behavior, and development are shaped by transposable element-induced mutations in Drosophila. PMID:30753202
Contrasting patterns of molecular evolution in metazoan germ line genes. PMID:30744572
Drosophila ZDHHC8 palmitoylates scribble and Ras64B and controls growth and viability. PMID:30735487
Ion Channel Contributions to Wing Development in Drosophila melanogaster. PMID:30733380
Drosophila as a Genetic Model for Hematopoiesis. PMID:30733377
Promoter-proximal pausing mediated by the exon junction complex regulates splicing. PMID:30705266
Neuronal overexpression of Alzheimer's disease and Down's syndrome associated DYRK1A/minibrain gene alters motor decline, neurodegeneration and synaptic plasticity in Drosophila. PMID:30703437
O-GlcNAcylation of PERIOD regulates its interaction with CLOCK and timing of circadian transcriptional repression. PMID:30703153
Evolution of salivary glue genes in Drosophila species. PMID:30696414
Unraveling Novel Mechanisms of Neurodegeneration Through a Large-Scale Forward Genetic Screen in Drosophila. PMID:30693015
Small Segmental Duplications in Drosophila-High Rate of Emergence and Elimination. PMID:30689862
Towards comprehensive annotation of Drosophila melanogaster enzymes in FlyBase. PMID:30689844
Ask1 and Akt act synergistically to promote ROS-dependent regeneration in Drosophila. PMID:30677014
An interaction-based model for neuropsychiatric features of copy-number variants. PMID:30653500
ExtRamp: a novel algorithm for extracting the ramp sequence based on the tRNA adaptation index or relative codon adaptiveness. PMID:30649455
Accurate elimination of superfluous attachment cells is critical for the construction of functional multicellular proprioceptors in Drosophila. PMID:30622305
Conserved function of the matriptase-prostasin proteolytic cascade during epithelial morphogenesis. PMID:30601807
Re-annotation of eight Drosophila genomes. PMID:30599046
Duplication and expression of Sox genes in spiders. PMID:30587109
Transcriptional dynamics of microRNAs and their targets during Drosophila neurogenesis. PMID:30582411
Evolution of maternal and zygotic mRNA complements in the early Drosophila embryo. PMID:30557299
Studying Transcriptional Enhancers: The Founder Fallacy, Validation Creep, and Other Biases. PMID:30553552
Transcriptome Analysis Reveals Candidate Genes for Cold Tolerance in Drosophila ananassae. PMID:30545157
Both Intrinsically Disordered Regions and Structural Domains Evolve Rapidly in Immune-Related Mammalian Proteins. PMID:30518031
Actomyosin-Driven Tension at Compartmental Boundaries Orients Cell Division Independently of Cell Geometry In Vivo. PMID:30503752
Tissue-Specific cis-Regulatory Divergence Implicates eloF in Inhibiting Interspecies Mating in Drosophila. PMID:30503619
The BioGRID interaction database: 2019 update. PMID:30476227
Symbiotic microbes affect the expression of male reproductive genes in Glossina m. morsitans. PMID:30470198
Systematic Analysis of SIN3 Histone Modifying Complex Components During Development. PMID:30451916
CRM Discovery Beyond Model Insects. PMID:30414115
Bacteriocyte Reprogramming to Cope With Nutritional Stress in a Phloem Sap Feeding Hemipteran, the Pea Aphid Acyrthosiphon pisum. PMID:30410449
Overexpression of CBS and CSE genes affects lifespan, stress resistance and locomotor activity in Drosophila melanogaster. PMID:30408770
Cytokine exocytosis and JAK/STAT activation in the Drosophila ovary requires the vesicle trafficking regulator α-Snap. PMID:30404830
The Drosophila Dot Chromosome: Where Genes Flourish Amidst Repeats. PMID:30401762
Nuclear Transcriptomes of the Seven Neuronal Cell Types That Constitute the Drosophila Mushroom Bodies. PMID:30397017
RNAcentral: a hub of information for non-coding RNA sequences. PMID:30395267
Pervasive gene conversion in chromosomal inversion heterozygotes. PMID:30387889
Variation in Mitochondria-Derived Transcript Levels Associated With DDT Resistance in the 91-R Strain of Drosophila melanogaster (Diptera: Drosophilidae). PMID:30383265
The role of the trithorax group TnaA isoforms in Hox gene expression, and in Drosophila late development. PMID:30372466
FlyBase 2.0: the next generation. PMID:30364959
HP1B is a euchromatic Drosophila HP1 homolog with links to metabolism. PMID:30346969
Impact of PYROXD1 deficiency on cellular respiration and correlations with genetic analyses of limb-girdle muscular dystrophy in Saudi Arabia and Sudan. PMID:30345904
Transcriptomic Plasticity in the Arthropod Generalist Tetranychus urticae Upon Long-Term Acclimation to Different Host Plants. PMID:30333191
REDfly: the transcriptional regulatory element database for Drosophila. PMID:30329093
Genenames.org: the HGNC and VGNC resources in 2019. PMID:30304474
Using a phiC31 "Disintegrase" to make new attP sites in the Drosophila genome at locations showing chromosomal position effects. PMID:30296303
A Membrane Transporter Is Required for Steroid Hormone Uptake in Drosophila. PMID:30293839
Coadapted genomes and selection on hybrids: Fisher's geometric model explains a variety of empirical patterns. PMID:30283696
Reprogramming of regulatory network using expression uncovers sex-specific gene regulation in Drosophila. PMID:30283019
Molecular characterization of putative neuropeptide, amine, diffusible gas and small molecule transmitter biosynthetic enzymes in the eyestalk ganglia of the American lobster, Homarus americanus. PMID:30276482
Genetic basis of thermal plasticity variation in Drosophila melanogaster body size. PMID:30256798
4C-seq characterization of Drosophila BEAF binding regions provides evidence for highly variable long-distance interactions between active chromatin. PMID:30248133
The Drosophila Small Conductance Calcium-Activated Potassium Channel Negatively Regulates Nociception. PMID:30231996
Model organism data evolving in support of translational medicine. PMID:30224793
The Two Main Olfactory Receptor Families in Drosophila, ORs and IRs: A Comparative Approach. PMID:30214396
DeepGSR: an optimized deep-learning structure for the recognition of genomic signals and regions. PMID:30184052
Mushroom Body Specific Transcriptome Analysis Reveals Dynamic Regulation of Learning and Memory Genes After Acquisition of Long-Term Courtship Memory in Drosophila. PMID:30158319
Planar cell polarity: the prickle gene acts independently on both the Ds/Ft and the Stan/Fz systems. PMID:30154173
Support for the Dominance Theory in Drosophila Transcriptomes. PMID:30131345
Phenotypic characterization of diamond (dind), a Drosophila gene required for multiple aspects of cell division. PMID:30120539
Computational resources associating diseases with genotypes, phenotypes and exposures. PMID:30102366
The mitochondrial transporter SLC25A25 links ciliary TRPP2 signaling and cellular metabolism. PMID:30080851
De novo assembly of a young Drosophila Y chromosome using single-molecule sequencing and chromatin conformation capture. PMID:30059545
mTOR Complex 1 Implicated in Aphid/Buchnera Host/Symbiont Integration. PMID:30049746
Pathogenic tau-induced piRNA depletion promotes neuronal death through transposable element dysregulation in neurodegenerative tauopathies. PMID:30038280
Recent Developments in Using Drosophila as a Model for Human Genetic Disease. PMID:30011838
Levels of DNA cytosine methylation in the Drosophila genome. PMID:30002967
Condensin II drives large-scale folding and spatial partitioning of interphase chromosomes in Drosophila nuclei. PMID:30001329
The Genetics of a Behavioral Speciation Phenotype in an Island System. PMID:29996514
A scar-like lesion is apparent in basement membrane after wound repair in vivo. PMID:29981372
Gene Regulatory Variation in Drosophila melanogaster Renal Tissue. PMID:29976765
Characterization of a cdc14 null allele in Drosophila melanogaster. PMID:29945873
A Single-Cell Transcriptome Atlas of the Aging Drosophila Brain. PMID:29909982
Ultrastructural analysis of mitotic Drosophila S2 cells identifies distinctive microtubule and intracellular membrane behaviors. PMID:29907103
Genetic screen identifies a requirement for SMN in mRNA localisation within the Drosophila oocyte. PMID:29895323
Drosophila Insulin-Like Peptides DILP2 and DILP5 Differentially Stimulate Cell Signaling and Glycogen Phosphorylase to Regulate Longevity. PMID:29892262
The transcription factor Grainy head primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes. PMID:29867222
Conserved Noncoding Elements Influence the Transposable Element Landscape in Drosophila. PMID:29850787
Gene family innovation, conservation and loss on the animal stem lineage. PMID:29848444
Combining RNA-seq data and homology-based gene prediction for plants, animals and fungi. PMID:29843602
No wisdom in the crowd: genome annotation in the era of big data - current status and future prospects. PMID:29806194
Non-canonical Phototransduction Mediates Synchronization of the Drosophila melanogaster Circadian Clock and Retinal Light Responses. PMID:29779871
Identifying Genetic Players in Cell Sheet Morphogenesis Using a Drosophila Deficiency Screen for Genes on Chromosome 2R Involved in Dorsal Closure. PMID:29776969
Genetic Analyses of Elys Mutations in Drosophila Show Maternal-Effect Lethality and Interactions with Nucleoporin Genes. PMID:29773558
Using FlyBase to Find Functionally Related Drosophila Genes. PMID:29761468
De Novo DNA Synthesis in Aedes aegypti Midgut Cells as a Complementary Strategy to Limit Dengue Viral Replication. PMID:29755433
Longevity and transposon defense, the case of termite reproductives. PMID:29735660
Regulation of the X Chromosome in the Germline and Soma of Drosophila melanogaster Males. PMID:29734690
Gene regulatory network architecture in different developmental contexts influences the genetic basis of morphological evolution. PMID:29723190
A Fly's Eye View of Natural and Drug Reward. PMID:29720947
Analysis of immune-related genes during Nora virus infection of Drosophila melanogaster using next generation sequencing. PMID:29707694
Differentially expressed microRNAs associated with changes of transcript levels in detoxification pathways and DDT-resistance in the Drosophila melanogaster strain 91-R. PMID:29698530
Suppression of epithelial folding at actomyosin-enriched compartment boundaries downstream of Wingless signalling in Drosophila. PMID:29691225
Micropublication: incentivizing community curation and placing unpublished data into the public domain. PMID:29688367
Supervised machine learning reveals introgressed loci in the genomes of Drosophila simulans and D. sechellia. PMID:29684059
An RNAi Screen Identifies New Genes Required for Normal Morphogenesis of Larval Chordotonal Organs. PMID:29678948
The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster. PMID:29670218
Transcription start site analysis reveals widespread divergent transcription in D. melanogaster and core promoter-encoded enhancer activities. PMID:29659982
Basement membrane mechanics shape development: Lessons from the fly. PMID:29656148
NCX-DB: a unified resource for integrative analysis of the sodium calcium exchanger super-family. PMID:29649983
Mechanical Model of Nuclei Ordering in Drosophila Embryos Reveals Dilution of Stochastic Forces. PMID:29642041
Identification of Proteins Required for Precise Positioning of Apc2 in Dendrites. PMID:29602811
A gene-specific T2A-GAL4 library for Drosophila. PMID:29565247
Cooperative recruitment of Yan via a high-affinity ETS supersite organizes repression to confer specificity and robustness to cardiac cell fate specification. PMID:29535190
Regulation of Circadian Behavior by Astroglial MicroRNAs in Drosophila. PMID:29487148
Drosophila Full-Length Amyloid Precursor Protein Is Required for Visual Working Memory and Prevents Age-Related Memory Impairment. PMID:29478851
Small RNA populations revealed by blocking rRNA fragments in Drosophila melanogaster reproductive tissues. PMID:29474379
An ancient family of lytic polysaccharide monooxygenases with roles in arthropod development and biomass digestion. PMID:29472725
Re-Arrangements in the Cytoplasmic Distribution of Small RNAs Following the Maternal-to-Zygotic Transition in Drosophila Embryos. PMID:29439397
Differential Regulation of Immune Signaling and Survival Response in Drosophila melanogaster Larvae upon Steinernema carpocapsae Nematode Infection. PMID:29419764
The PKA-C3 catalytic subunit is required in two pairs of interneurons for successful mating of Drosophila. PMID:29410515
A 'molecular guillotine' reveals the interphase function of Kinesin-5. PMID:29361546
Comparative genomics analysis of triatomines reveals common first line and inducible immunity-related genes and the absence of Imd canonical components among hemimetabolous arthropods. PMID:29357911
Uncovering Genomic Regions Associated with Trypanosoma Infections in Wild Populations of the Tsetse Fly Glossina fuscipes. PMID:29343494
LocText: relation extraction of protein localizations to assist database curation. PMID:29343218
Identification of neural transcription factors required for the differentiation of three neuronal subtypes in the sea urchin embryo. PMID:29331498
The ModERN Resource: Genome-Wide Binding Profiles for Hundreds of Drosophila and Caenorhabditis elegans Transcription Factors. PMID:29284660
A conserved maternal-specific repressive domain in Zelda revealed by Cas9-mediated mutagenesis in Drosophila melanogaster. PMID:29261646
Evidence for a hierarchical transcriptional circuit in Drosophila male germline involving testis-specific TAF and two gene-specific transcription factors, Mod and Acj6. PMID:29235675
Deep experimental profiling of microRNA diversity, deployment, and evolution across the Drosophila genus. PMID:29233922
funRiceGenes dataset for comprehensive understanding and application of rice functional genes. PMID:29220485
Expression of lamina proteins Lamin and Kugelkern suppresses stem cell proliferation. PMID:29210315
Cell-Type Transcriptomes of the Multicellular Green Alga Volvox carteri Yield Insights into the Evolutionary Origins of Germ and Somatic Differentiation Programs. PMID:29208647
The European Bioinformatics Institute in 2017: data coordination and integration. PMID:29186510
PlanNET: homology-based predicted interactome for multiple planarian transcriptomes. PMID:29186384
Transcriptome sequencing reveals high isoform diversity in the ant Formica exsecta. PMID:29177112
Adult functions for the Drosophila DHR78 nuclear receptor. PMID:29171103
A multiplexable TALE-based binary expression system for in vivo cellular interaction studies. PMID:29162808
Severe Fertility Effects of sheepish Sperm Caused by Failure To Enter Female Sperm Storage Organs in Drosophila melanogaster. PMID:29158336
GFZF, a Glutathione S-Transferase Protein Implicated in Cell Cycle Regulation and Hybrid Inviability, Is a Transcriptional Coactivator. PMID:29158293
Molecular Interaction Search Tool (MIST): an integrated resource for mining gene and protein interaction data. PMID:29155944
RNA-Sequencing of Drosophila melanogaster Head Tissue on High-Sugar and High-Fat Diets. PMID:29141990
NONCODEV5: a comprehensive annotation database for long non-coding RNAs. PMID:29140524
Maternal loading of a small heat shock protein increases embryo thermal tolerance in Drosophila melanogaster. PMID:29097593
Ionotropic Receptor 76b Is Required for Gustatory Aversion to Excessive Na+ in Drosophila. PMID:29081083
Expanded and updated data and a query pipeline for iBeetle-Base. PMID:29069517
A deep transcriptomic resource for the copepod crustacean Labidocera madurae: A potential indicator species for assessing near shore ecosystem health. PMID:29065152
Xenbase: a genomic, epigenomic and transcriptomic model organism database. PMID:29059324
Gene Expression as a Dosimeter in Irradiated Drosophila melanogaster. PMID:29035581
Reduced Cardiac Calcineurin Expression Mimics Long-Term Hypoxia-Induced Heart Defects in Drosophila. PMID:28986453
Net Evolutionary Loss of Residue Polarity in Drosophilid Protein Cores Indicates Ongoing Optimization of Amino Acid Composition. PMID:28985302
Control of Western Corn Rootworm (Diabrotica virgifera virgifera) Reproduction through Plant-Mediated RNA Interference. PMID:28974735
Rapid DNA Synthesis During Early Drosophila Embryogenesis Is Sensitive to Maternal Humpty Dumpty Protein Function. PMID:28942426
Tango7 regulates cortical activity of caspases during reaper-triggered changes in tissue elasticity. PMID:28928435
Genome-wide scans between two honeybee populations reveal putative signatures of human-mediated selection. PMID:28872253
Mouse Genome Informatics (MGI) Resource: Genetic, Genomic, and Biological Knowledgebase for the Laboratory Mouse. PMID:28838066
Single vector non-leaky gene expression system for Drosophila melanogaster. PMID:28761084
Relieving the Pressure on Tissue Development. PMID:28746846
Functional Profiling of Transcription Factor Genes in Neurospora crassa. PMID:28696922
Taking Stock of the Drosophila Research Ecosystem. PMID:28684603
Metabolomic Studies in Drosophila. PMID:28684601
Gene2Function: An Integrated Online Resource for Gene Function Discovery. PMID:28663344
Regulation of Drosophila Lifespan by bellwether Promoter Alleles. PMID:28646164
Phase separation drives heterochromatin domain formation. PMID:28636597
A hormonal cue promotes timely follicle cell migration by modulating transcription profiles. PMID:28610887
Naming CRISPR alleles: endonuclease-mediated mutation nomenclature across species. PMID:28589392
Genomic adaptation to agricultural environments: cabbage white butterflies (Pieris rapae) as a case study. PMID:28549454
Drosophila melanogaster positive transcriptional elongation factors regulate metabolic and sex-biased expression in adults. PMID:28521739
SoxNeuro and Shavenbaby act cooperatively to shape denticles in the embryonic epidermis of Drosophila. PMID:28506986
A Drosophila model for developmental nicotine exposure. PMID:28498868
Alcohol-Induced Neuroadaptation Is Orchestrated by the Histone Acetyltransferase CBP. PMID:28442993
The absence of crossovers on chromosome 4 in Drosophila melanogaster: Imperfection or interesting exception? PMID:28426351
Mechanisms of LTR-Retroelement Transposition: Lessons from Drosophila melanogaster. PMID:28420154
Proteomics Analysis Identifies Orthologs of Human Chitinase-Like Proteins as Inducers of Tube Morphogenesis Defects in Drosophila melanogaster. PMID:28404605
FlyBase 101--the basics of navigating FlyBase PubMed citations: 242.

242 articles citing: FlyBase 101--the basics of navigating FlyBase

Functional Studies of Genetic Variants Associated with Human Diseases in Notch Signaling-Related Genes Using Drosophila. PMID:35674905
"A fly appeared": sable, a classic Drosophila mutation, maps to Yippee, a gene affecting body color, wings, and bristles. PMID:35266526
FlyBase: a guided tour of highlighted features. PMID:35266522
A docked mutation phenocopies dumpy oblique alleles via altered vesicle trafficking. PMID:34721959
A Comparative Perspective on Functionally-Related, Intracellular Calcium Channels: The Insect Ryanodine and Inositol 1,4,5-Trisphosphate Receptors. PMID:34356655
Structural and Genetic Determinants of Convergence in the Drosophila tRNA Structure-Function Map. PMID:33528599
Genetic Basis of Natural Variation in Spontaneous Grooming in Drosophila melanogaster. PMID:32727922
Genetics of cocaine and methamphetamine consumption and preference in Drosophila melanogaster. PMID:31107875
Genomic changes associated with adaptation to arid environments in cactophilic Drosophila species. PMID:30651071
Non-canonical Drosophila X chromosome dosage compensation and repressive topologically associated domains. PMID:30355339
A Cyclin E Centered Genetic Network Contributes to Alcohol-Induced Variation in Drosophila Development. PMID:29871898
Unusual Novel SnoRNA-Like RNAs in Drosophila melanogaster. PMID:29861420
RNA Interference (RNAi) Screening in Drosophila. PMID:29487145
Mutational Pleiotropy and the Strength of Stabilizing Selection Within and Between Functional Modules of Gene Expression. PMID:29437825
Co-complex protein membership evaluation using Maximum Entropy on GO ontology and InterPro annotation. PMID:29390084
Functional characterization of adaptive variation within a cis-regulatory element influencing Drosophila melanogaster growth. PMID:29324742
Dosage-Dependent Expression Variation Suppressed on the Drosophila Male X Chromosome. PMID:29242386
Molecular characterization of tsetse's proboscis and its response to Trypanosoma congolense infection. PMID:29155830
The folded k-spectrum kernel: A machine learning approach to detecting transcription factor binding sites with gapped nucleotide dependencies. PMID:28982128
Genetics of alcohol consumption in Drosophila melanogaster. PMID:28627812
Single-Molecule Sequencing of the Drosophila serrata Genome. PMID:28143951
An Asymmetrically Balanced Organization of Kinases versus Phosphatases across Eukaryotes Determines Their Distinct Impacts. PMID:28135269
Editor's Highlight: Genetic Targets of Acute Toluene Inhalation in Drosophila melanogaster. PMID:28013218
Exploring FlyBase Data Using QuickSearch. PMID:27930807
RNA-binding profiles of Drosophila CPEB proteins Orb and Orb2. PMID:27791065
Using FlyBase, a Database of Drosophila Genes and Genomes. PMID:27730573
Predicting essential proteins based on subcellular localization, orthology and PPI networks. PMID:27586883
The Landscape of A-to-I RNA Editome Is Shaped by Both Positive and Purifying Selection. PMID:27467689
Nuclear import sequence identification in hOAS3 protein. PMID:27379722
Drosophila Embryos as a Model for Wound-Induced Transcriptional Dynamics: Genetic Strategies to Achieve a Localized Wound Response. PMID:27274436
ArthropodaCyc: a CycADS powered collection of BioCyc databases to analyse and compare metabolism of arthropods. PMID:27242037
Representation of anatomy in online atlases and databases: a survey and collection of patterns for interface design. PMID:27206491
Exploring the Conserved Role of MANF in the Unfolded Protein Response in Drosophila melanogaster. PMID:26975047
The Genetic Basis for Variation in Sensitivity to Lead Toxicity in Drosophila melanogaster. PMID:26859824
The Female Post-Mating Response Requires Genes Expressed in the Secondary Cells of the Male Accessory Gland in Drosophila melanogaster. PMID:26746709
Identification and Validation of Novel Hedgehog-Responsive Enhancers Predicted by Computational Analysis of Ci/Gli Binding Site Density. PMID:26710299
Polymorphisms in early neurodevelopmental genes affect natural variation in alcohol sensitivity in adult drosophila. PMID:26503115
Recombining without Hotspots: A Comprehensive Evolutionary Portrait of Recombination in Two Closely Related Species of Drosophila. PMID:26430062
Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. PMID:26370122
Regulation of alternative splicing in Drosophila by 56 RNA binding proteins. PMID:26294686
Histone lysine demethylases in Drosophila melanogaster. PMID:26207949
Alternative Splice in Alternative Lice. PMID:26169943
Mechanisms and functions of Nrf2 signaling in Drosophila. PMID:26117322
Accounting for genetic architecture improves sequence based genomic prediction for a Drosophila fitness trait. PMID:25950439
Cropped, Drosophila transcription factor AP-4, controls tracheal terminal branching and cell growth. PMID:25888431
Low-cost, low-input RNA-seq protocols perform nearly as well as high-input protocols. PMID:25834775
Integrating motif, DNA accessibility and gene expression data to build regulatory maps in an organism. PMID:25791631
A single and rapid calcium wave at egg activation in Drosophila. PMID:25750438
Hessian fly larval feeding triggers enhanced polyamine levels in susceptible but not resistant wheat. PMID:25592131
Drosophila oocytes as a model for understanding meiosis: an educational primer to accompany "corolla is a novel protein that contributes to the architecture of the synaptonemal complex of Drosophila". PMID:25573011
Drosophila melanogaster show a threshold effect in response to radiation. PMID:25552957
A nutrient-driven tRNA modification alters translational fidelity and genome-wide protein coding across an animal genus. PMID:25489848
Higher frequency of intron loss from the promoter proximally paused genes of Drosophila melanogaster. PMID:25483256
Tree shrew database (TreeshrewDB): a genomic knowledge base for the Chinese tree shrew. PMID:25413576
Drep-2 is a novel synaptic protein important for learning and memory. PMID:25392983
αTubulin 67C and Ncd are essential for establishing a cortical microtubular network and formation of the Bicoid mRNA gradient in Drosophila. PMID:25390693
iBeetle-Base: a database for RNAi phenotypes in the red flour beetle Tribolium castaneum. PMID:25378303
Cdc42 and formin activity control non-muscle myosin dynamics during Drosophila heart morphogenesis. PMID:25267295
DNA copy number evolution in Drosophila cell lines. PMID:25262759
The Gos28 SNARE protein mediates intra-Golgi transport of rhodopsin and is required for photoreceptor survival. PMID:25261468
Loss of Na(+)/K(+)-ATPase in Drosophila photoreceptors leads to blindness and age-dependent neurodegeneration. PMID:25205229
Overview of the gene ontology task at BioCreative IV. PMID:25157073
Compact genome of the Antarctic midge is likely an adaptation to an extreme environment. PMID:25118180
Genome-wide patterns of genetic variation within and among alternative selective regimes. PMID:25101783
Transcript length mediates developmental timing of gene expression across Drosophila. PMID:25069653
Underreplicated regions in Drosophila melanogaster are enriched with fast-evolving genes and highly conserved noncoding sequences. PMID:25062918
Starvation-response may not involve Atg1-dependent autophagy induction in non-unikont parasites. PMID:25059978
Integration of mapped RNA-Seq reads into automatic training of eukaryotic gene finding algorithm. PMID:24990371
Comparative validation of the D. melanogaster modENCODE transcriptome annotation. PMID:24985915
Identification of novel elements of the Drosophila blisterome sheds light on potential pathological mechanisms of several human diseases. PMID:24968325
Integrating the interactome and the transcriptome of Drosophila. PMID:24913703
Quantitative genome-wide enhancer activity maps for five Drosophila species show functional enhancer conservation and turnover during cis-regulatory evolution. PMID:24908250
Odorant and gustatory receptors in the tsetse fly Glossina morsitans morsitans. PMID:24763191
Limited gene misregulation is exacerbated by allele-specific upregulation in lethal hybrids between Drosophila melanogaster and Drosophila simulans. PMID:24723419
De novo transcriptome hybrid assembly and validation in the European earwig (Dermaptera, Forficula auricularia). PMID:24722757
Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines. PMID:24714809
Sex-biased expression of microRNAs in Drosophila melanogaster. PMID:24694940
Resources for functional genomics studies in Drosophila melanogaster. PMID:24653003
Navigating and mining modENCODE data. PMID:24636835
Tetrahymena thermophila: a divergent perspective on membrane traffic. PMID:24634411
A pipeline for the de novo assembly of the Themira biloba (Sepsidae: Diptera) transcriptome using a multiple k-mer length approach. PMID:24621177
Increased actin polymerization and stabilization interferes with neuronal function and survival in the AMPKγ mutant Loechrig. PMID:24587072
COMPARTMENTS: unification and visualization of protein subcellular localization evidence. PMID:24573882
Transcriptional markers of sub-optimal nutrition in developing Apis mellifera nurse workers. PMID:24529032
The ontogeny and evolution of sex-biased gene expression in Drosophila melanogaster. PMID:24526011
Oxidative stress is not a major contributor to somatic mitochondrial DNA mutations. PMID:24516391
A comparison of midline and tracheal gene regulation during Drosophila development. PMID:24465586
Competition within Introns: Splicing Wins over Polyadenylation via a General Mechanism. PMID:24455183
Evolution of a cellular immune response in Drosophila: a phenotypic and genomic comparative analysis. PMID:24443439
Faster evolving Drosophila paralogs lose expression rate and ubiquity and accumulate more non-synonymous SNPs. PMID:24438455
Whole genome phylogeny for 21 Drosophila species using predicted 2b-RAD fragments. PMID:24432193
Discovery and characterization of two Nimrod superfamily members in Anopheles gambiae. PMID:24428830
gsGator: an integrated web platform for cross-species gene set analysis. PMID:24423189
Evolution of thorax architecture in ant castes highlights trade-off between flight and ground behaviors. PMID:24399458
Neprilysins: an evolutionarily conserved family of metalloproteases that play important roles in reproduction in Drosophila. PMID:24395329
Transcriptome analysis in cotton boll weevil (Anthonomus grandis) and RNA interference in insect pests. PMID:24386449
Spatial expression of transcription factors in Drosophila embryonic organ development. PMID:24359758
Comparison of ultra-conserved elements in drosophilids and vertebrates. PMID:24349264
Alcohol-induced histone acetylation reveals a gene network involved in alcohol tolerance. PMID:24348266
Identification of sphingolipid metabolites that induce obesity via misregulation of appetite, caloric intake and fat storage in Drosophila. PMID:24339790
Long-chain Acyl-CoA synthetase 4A regulates Smad activity and dorsoventral patterning in the zebrafish embryo. PMID:24332754
Microinjection wound assay and in vivo localization of epidermal wound response reporters in Drosophila embryos. PMID:24300796
Transcriptome and proteome quantification of a tumor model provides novel insights into post-transcriptional gene regulation. PMID:24289286
A whole transcriptomal linkage analysis of gene co-regulation in insecticide resistant house flies, Musca domestica. PMID:24252181
FlyBase 102--advanced approaches to interrogating FlyBase. PMID:24234449
Integrating in silico resources to map a signaling network. PMID:24233784
Oral delivery of double-stranded RNA in larvae of the yellow fever mosquito, Aedes aegypti: implications for pest mosquito control. PMID:24224468
Adaptive divergence of a transcriptional enhancer between populations of Drosophila melanogaster. PMID:24218636
Inducible protein traps with dominant phenotypes for functional analysis of the Drosophila genome. PMID:24172131
Aedes aegypti ML and Niemann-Pick type C family members are agonists of dengue virus infection. PMID:24135719
Cell-specific fine-tuning of neuronal excitability by differential expression of modulator protein isoforms. PMID:24133277
Flanking sequence context-dependent transcription factor binding in early Drosophila development. PMID:24093548
Advances in understanding the complex mechanisms of DNA interstrand cross-link repair. PMID:24086043
Male-specific Fruitless isoforms have different regulatory roles conferred by distinct zinc finger DNA binding domains. PMID:24074028
Functional screening in Drosophila identifies Alzheimer's disease susceptibility genes and implicates Tau-mediated mechanisms. PMID:24067533
Manipulation of colony environment modulates honey bee aggression and brain gene expression. PMID:24034579
Characterization of the structural and functional determinants of MANF/CDNF in Drosophila in vivo model. PMID:24019940
The intricate relationship between microtubules and their associated motor proteins during axon growth and maintenance. PMID:24010872
Molecular cloning and characterization of novel glutamate-gated chloride channel subunits from Schistosoma mansoni. PMID:24009509
New levels of transcriptome complexity at upper thermal limits in wild Drosophila revealed by exon expression analysis. PMID:24002645
Physiological and stem cell compartmentalization within the Drosophila midgut. PMID:23991285
Genome-wide modeling of complex phenotypes in Caenorhabditis elegans and Drosophila melanogaster. PMID:23984798
GnpIS: an information system to integrate genetic and genomic data from plants and fungi. PMID:23959375
Whole-genome sequencing uncovers the genetic basis of chronic mountain sickness in Andean highlanders. PMID:23954164
Sequencing mRNA from cryo-sliced Drosophila embryos to determine genome-wide spatial patterns of gene expression. PMID:23951250
Functional requirements driving the gene duplication in 12 Drosophila species. PMID:23945147
Protein phosphatase 1ß limits ring canal constriction during Drosophila germline cyst formation. PMID:23936219
A graphical model method for integrating multiple sources of genome-scale data. PMID:23934610
Efficient identification of Y chromosome sequences in the human and Drosophila genomes. PMID:23921660
Abdominal-B and caudal inhibit the formation of specific neuroblasts in the Drosophila tail region. PMID:23903193
More accurate phylogenies inferred from low-recombination regions in the presence of incomplete lineage sorting. PMID:23888858
Computational detection of abundant long-range nucleotide covariation in Drosophila genomes. PMID:23887147
The role of Drosophila cytidine monophosphate-sialic acid synthetase in the nervous system. PMID:23884937
Half pint/Puf68 is required for negative regulation of splicing by the SR splicing factor Transformer2. PMID:23880637
Transcriptome characterisation of the ant Formica exsecta with new insights into the evolution of desaturase genes in social hymenoptera. PMID:23874539
Flexible approaches for teaching computational genomics in a health information management program. PMID:23861672
Genome evolution predicts genetic interactions in protein complexes and reveals cancer drug targets. PMID:23851603
miR-989 is required for border cell migration in the Drosophila ovary. PMID:23843983
A guide to best practices for Gene Ontology (GO) manual annotation. PMID:23842463
Evolution of three parent genes and their retrogene copies in Drosophila species. PMID:23841016
KONAGAbase: a genomic and transcriptomic database for the diamondback moth, Plutella xylostella. PMID:23837716
GoSynthetic database tool to analyse natural and engineered molecular processes. PMID:23813641
The 5'-3' exoribonuclease Pacman (Xrn1) regulates expression of the heat shock protein Hsp67Bc and the microRNA miR-277-3p in Drosophila wing imaginal discs. PMID:23792537
Combining genome-wide methods to investigate the genetic complexity of courtship song variation in Drosophila melanogaster. PMID:23777628
Transcriptional response of honey bee larvae infected with the bacterial pathogen Paenibacillus larvae. PMID:23762370
Investigation of dmyc Promoter and Regulatory Regions. PMID:23761963
Probing the boundaries of orthology: the unanticipated rapid evolution of Drosophila centrosomin. PMID:23749319
Strong purifying selection at synonymous sites in D. melanogaster. PMID:23737754
Rates and genomic consequences of spontaneous mutational events in Drosophila melanogaster. PMID:23733788
Distinct mechanisms of transcriptional pausing orchestrated by GAGA factor and M1BP, a novel transcription factor. PMID:23708796
Identification of novel arthropod vector G protein-coupled receptors. PMID:23705687
Females and males contribute in opposite ways to the evolution of gene order in Drosophila. PMID:23696898
A genome-wide RNAi screen draws a genetic framework for transposon control and primary piRNA biogenesis in Drosophila. PMID:23665228
A burst of ABC genes in the genome of the polyphagous spider mite Tetranychus urticae. PMID:23663308
The impact of trans-regulation on the evolutionary rates of metazoan proteins. PMID:23658220
InterMOD: integrated data and tools for the unification of model organism research. PMID:23652793
Genomic resources for multiple species in the Drosophila ananassae species group. PMID:23639891
Serine proteolytic pathway activation reveals an expanded ensemble of wound response genes in Drosophila. PMID:23637905
Chromatin-associated proteins HP1 and Mod(mdg4) modify Y-linked regulatory variation in the drosophila testis. PMID:23636736
Proteomic profiling in Drosophila reveals potential Dube3a regulation of the actin cytoskeleton and neuronal homeostasis. PMID:23626758
dusky-like is required to maintain the integrity and planar cell polarity of hairs during the development of the Drosophila wing. PMID:23623898
TnaA, an SP-RING protein, interacts with Osa, a subunit of the chromatin remodeling complex BRAHMA and with the SUMOylation pathway in Drosophila melanogaster. PMID:23620817
Computational identification of functional introns: high positional conservation of introns that harbor RNA genes. PMID:23605046
Natural variation of the Y chromosome suppresses sex ratio distortion and modulates testis-specific gene expression in Drosophila simulans. PMID:23591516
Socs36E attenuates STAT signaling to optimize motile cell specification in the Drosophila ovary. PMID:23583584
New components of Drosophila leg development identified through genome wide association studies. PMID:23560084
Diversity of transposable elements and repeats in a 600 kb region of the fly Calliphora vicina. PMID:23552491
The evolutionarily conserved protein CG9186 is associated with lipid droplets, required for their positioning and for fat storage. PMID:23525007
Enhancer trap infidelity in Drosophila optomotor-blind. PMID:23519069
Global analysis of Drosophila Cys₂-His₂ zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. PMID:23471540
Open source libraries and frameworks for mass spectrometry based proteomics: a developer's perspective. PMID:23467006
Novel isoforms of the transport regulator klar. PMID:23457459
Inhibition of diuretic stimulation of an insect secretory epithelium by a cGMP-dependent protein kinase. PMID:23445619
An analysis and prediction of nucleosome positioning based on information content. PMID:23435498
Polycomb group response elements in Drosophila and vertebrates. PMID:23419717
IGSF9 family proteins. PMID:23417431
Evolutionary history of eukaryotic α-glucosidases from the α-amylase family. PMID:23397242
Optimising homing endonuclease gene drive performance in a semi-refractory species: the Drosophila melanogaster experience. PMID:23349805
Mechanisms and dynamics of orphan gene emergence in insect genomes. PMID:23348040
R7 photoreceptor axon growth is temporally controlled by the transcription factor Ttk69, which inhibits growth in part by promoting transforming growth factor-β/activin signaling. PMID:23345225
Turning gold into 'junk': transposable elements utilize central proteins of cellular networks. PMID:23341038
The microRNA miR-7 regulates Tramtrack69 in a developmental switch in Drosophila follicle cells. PMID:23325762
A genetic polymorphism evolving in parallel in two cell compartments and in two clades. PMID:23311980
Ehrlichia chaffeensis replication sites in adult Drosophila melanogaster. PMID:23306065
Genome-wide fine-scale recombination rate variation in Drosophila melanogaster. PMID:23284288
Analysis of natural variation reveals neurogenetic networks for Drosophila olfactory behavior. PMID:23277560
COPS: detecting co-occurrence and spatial arrangement of transcription factor binding motifs in genome-wide datasets. PMID:23272209
Genomic response to selection for postponed senescence in Drosophila. PMID:23262286
Mutation spectrum of Drosophila CNVs revealed by breakpoint sequencing. PMID:23259534
Cell-type-specific roles of Na+/K+ ATPase subunits in Drosophila auditory mechanosensation. PMID:23248276
CBS: an open platform that integrates predictive methods and epigenetics information to characterize conserved regulatory features in multiple Drosophila genomes. PMID:23228284
Impact of genomic structural variation in Drosophila melanogaster based on population-scale sequencing. PMID:23222910
Calcium and egg activation in Drosophila. PMID:23218670
The BioGRID interaction database: 2013 update. PMID:23203989
FlyAtlas: database of gene expression in the tissues of Drosophila melanogaster. PMID:23203866
Fife, a Drosophila Piccolo-RIM homolog, promotes active zone organization and neurotransmitter release. PMID:23197698
A mutation in EGF repeat-8 of Notch discriminates between Serrate/Jagged and Delta family ligands. PMID:23197537
GenomeRNAi: a database for cell-based and in vivo RNAi phenotypes, 2013 update. PMID:23193271
OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs. PMID:23180791
ASGARD: an open-access database of annotated transcriptomes for emerging model arthropod species. PMID:23180770
Expression of small RNA in Aphis gossypii and its potential role in the resistance interaction with melon. PMID:23173035
Population and sex differences in Drosophila melanogaster brain gene expression. PMID:23170910
Identification of genetic suppressors of the Sin3A knockdown wing phenotype. PMID:23166712
Opportunities for text mining in the FlyBase genetic literature curation workflow. PMID:23160412
A novel role for lipid droplets in the organismal antibacterial response. PMID:23150794
MonarchBase: the monarch butterfly genome database. PMID:23143105
Effects of premature termination codon polymorphisms in the Drosophila pseudoobscura subclade. PMID:23132097
FlyBase: improvements to the bibliography. PMID:23125371
Insights into the evolutionary features of human neurodegenerative diseases. PMID:23118989
Spliceosome database: a tool for tracking components of the spliceosome. PMID:23118483
Muscleblind, BSF and TBPH are mislocalized in the muscle sarcomere of a Drosophila myotonic dystrophy model. PMID:23118342
Substrate-borne vibratory communication during courtship in Drosophila melanogaster. PMID:23103187
Global analysis of target genes of 21 members of the ZAD transcription factor family in Drosophila melanogaster. PMID:23085320
Lipid droplets control the maternal histone supply of Drosophila embryos. PMID:23084995
Wapl antagonizes cohesin binding and promotes Polycomb-group silencing in Drosophila. PMID:23034634
Zinc finger binding motifs do not explain recombination rate variation within or between species of Drosophila. PMID:23028758
Transcriptome analysis of Drosophila CNS midline cells reveals diverse peptidergic properties and a role for castor in neuronal differentiation. PMID:23010511
Online tools for bioinformatics analyses in nutrition sciences. PMID:22983844
RhesusBase: a knowledgebase for the monkey research community. PMID:22965133
Regulatory RNAs in the light of Drosophila genomics. PMID:22956639
Epistasis dominates the genetic architecture of Drosophila quantitative traits. PMID:22949659
Dissecting the molecular bridges that mediate the function of Frizzled in planar cell polarity. PMID:22949620
The claudin Megatrachea protein complex. PMID:22930751
Conservation of caspase substrates across metazoans suggests hierarchical importance of signaling pathways over specific targets and cleavage site motifs in apoptosis. PMID:22918439
Drosophila Hox and sex-determination genes control segment elimination through EGFR and extramacrochetae activity. PMID:22912593
An indel polymorphism in the hybrid incompatibility gene lethal hybrid rescue of Drosophila is functionally relevant. PMID:22865735
The conserved kinase SRPK regulates karyosome formation and spindle microtubule assembly in Drosophila oocytes. PMID:22854045
Identification of critical host mitochondrion-associated genes during Ehrlichia chaffeensis infections. PMID:22851751
Transcriptome analysis reveals novel patterning and pigmentation genes underlying Heliconius butterfly wing pattern variation. PMID:22747837
Developmental expression of drop-dead is required for early adult survival and normal body mass in Drosophila melanogaster. PMID:22728457
i-cisTarget: an integrative genomics method for the prediction of regulatory features and cis-regulatory modules. PMID:22718975
Mechanical and temperature stressor-induced seizure-and-paralysis behaviors in Drosophila bang-sensitive mutants. PMID:22716921
MAGNET: MicroArray Gene expression and Network Evaluation Toolkit. PMID:22669910
The Bic-C family of developmental translational regulators. PMID:22611335
MicrobeDB: a locally maintainable database of microbial genomic sequences. PMID:22576174
Directly e-mailing authors of newly published papers encourages community curation. PMID:22554788
Drosophila melanogaster Zelda and Single-minded collaborate to regulate an evolutionarily dynamic CNS midline cell enhancer. PMID:22537497
Mediation of Drosophila autosomal dosage effects and compensation by network interactions. PMID:22531030
The Drosophila protein mustard tailors the innate immune response activated by the immune deficiency pathway. PMID:22427641
A new database (GCD) on genome composition for eukaryote and prokaryote genome sequences and their initial analyses. PMID:22417913
Chromatin domain boundary element search tool for Drosophila. PMID:22287636
The 2012 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection. PMID:22144685
FlyBase 102--advanced approaches to interrogating FlyBase PubMed citations: 212.

212 articles citing: FlyBase 102--advanced approaches to interrogating FlyBase

The phospho-docking protein 14-3-3 regulates microtubule-associated proteins in oocytes including the chromosomal passenger Borealin. PMID:35666772
Molecular population genetics of Sex-lethal (Sxl) in the Drosophila melanogaster species group: a locus that genetically interacts with Wolbachia pipientis in Drosophila melanogaster. PMID:34849818
A docked mutation phenocopies dumpy oblique alleles via altered vesicle trafficking. PMID:34721959
Parallel and population-specific gene regulatory evolution in cold-adapted fly populations. PMID:33989401
The Drosophila melanogaster as Genetic Model System to Dissect the Mechanisms of Disease that Lead to Neurodegeneration in Adrenoleukodystrophy. PMID:33417213
Leveraging Multiple Layers of Data To Predict Drosophila Complex Traits. PMID:33106232
Ageing, Drosophila melanogaster and Epigenetics. PMID:32684802
Enhanced genome assembly and a new official gene set for Tribolium castaneum. PMID:31937263
The SUMO Ligase Su(var)2-10 Controls Hetero- and Euchromatic Gene Expression via Establishing H3K9 Trimethylation and Negative Feedback Regulation. PMID:31901448
Heightened condition-dependence of the sexual transcriptome as a function of genetic quality in Drosophila melanogaster head tissue. PMID:31288700
Bridging the gap between reference and real transcriptomes. PMID:31159855
Identification of genes underlying phenotypic plasticity of wing size via insulin signaling pathway by network-based analysis in Sogatella furcifera. PMID:31113376
Widespread gene duplication and adaptive evolution in the RNA interference pathways of the Drosophila obscura group. PMID:31068148
Contrasting patterns of divergence at the regulatory and sequence level in European Daphnia galeata natural populations. PMID:30891195
HP1B is a euchromatic Drosophila HP1 homolog with links to metabolism. PMID:30346969
The Bear Giant-Skipper genome suggests genetic adaptations to living inside yucca roots. PMID:30293092
Dual-layer transposon repression in heads of Drosophila melanogaster. PMID:30217866
Numerous recursive sites contribute to accuracy of splicing in long introns in flies. PMID:30148878
Characterization of Drosophila ATPsynC mutants as a new model of mitochondrial ATP synthase disorders. PMID:30096161
aaquetzalli is required for epithelial cell polarity and neural tissue formation in Drosophila. PMID:29942698
Using FlyBase to Find Functionally Related Drosophila Genes. PMID:29761468
Comparative transcriptomics across 14 Drosophila species reveals signatures of longevity. PMID:29671950
RNA Interference (RNAi) Screening in Drosophila. PMID:29487145
The kinetics of pre-mRNA splicing in the Drosophila genome and the influence of gene architecture. PMID:29280736
Yeast interfering RNA larvicides targeting neural genes induce high rates of Anopheles larval mortality. PMID:29132374
Complete Genome of Achalarus lyciades, The First Representative of the Eudaminae Subfamily of Skippers. PMID:29081692
CBP Regulates Recruitment and Release of Promoter-Proximal RNA Polymerase II. PMID:29056321
The first complete genomes of Metalmarks and the classification of butterfly families. PMID:28757157
FlyExpress 7: An Integrated Discovery Platform To Study Coexpressed Genes Using in Situ Hybridization Images in Drosophila. PMID:28667017
Drug repurposing for aging research using model organisms. PMID:28620943
Genomic signatures of local adaptation in the Drosophila immune response. PMID:28586288
Genomic responses to the socio-sexual environment in male Drosophila melanogaster exposed to conspecific rivals. PMID:28428330
Modulation of the Proteostasis Machinery to Overcome Stress Caused by Diminished Levels of t6A-Modified tRNAs in Drosophila. PMID:28272317
Translational compensation of gene copy number alterations by aneuploidy in Drosophila melanogaster. PMID:28199687
Complete genome of Pieris rapae, a resilient alien, a cabbage pest, and a source of anti-cancer proteins. PMID:28163896
Genetic basis of octanoic acid resistance in Drosophila sechellia: functional analysis of a fine-mapped region. PMID:28035709
The Transcriptional Corepressor SIN3 Directly Regulates Genes Involved in Methionine Catabolism and Affects Histone Methylation, Linking Epigenetics and Metabolism. PMID:28028175
Transcriptome Analysis of Drosophila melanogaster Third Instar Larval Ring Glands Points to Novel Functions and Uncovers a Cytochrome p450 Required for Development. PMID:27974438
Exploring FlyBase Data Using QuickSearch. PMID:27930807
APOL1-Mediated Cell Injury Involves Disruption of Conserved Trafficking Processes. PMID:27864431
Using FlyBase, a Database of Drosophila Genes and Genomes. PMID:27730573
Loss of Atg16 delays the alcohol-induced sedation response via regulation of Corazonin neuropeptide production in Drosophila. PMID:27708416
Genetic and Genomic Response to Selection for Food Consumption in Drosophila melanogaster. PMID:27704301
The temporally controlled expression of Drongo, the fruit fly homolog of AGFG1, is achieved in female germline cells via P-bodies and its localization requires functional Rab11. PMID:27654348
A novel role for the 3'-5' exoribonuclease Dis3L2 in controlling cell proliferation and tissue growth. PMID:27630034
De Novo Transcriptome Assembly and Sex-Biased Gene Expression in the Cyclical Parthenogenetic Daphnia galeata. PMID:27604882
Obp56h Modulates Mating Behavior in Drosophila melanogaster. PMID:27558663
A Genomic Map of the Effects of Linked Selection in Drosophila. PMID:27536991
Genomic and expression analysis of transition proteins in Drosophila. PMID:27512614
Canalization of gene expression is a major signature of regulatory cold adaptation in temperate Drosophila melanogaster. PMID:27502401
The origin of chromosomal inversions as a source of segmental duplications in the Sophophora subgenus of Drosophila. PMID:27470196
Genetic Screen in Drosophila Larvae Links ird1 Function to Toll Signaling in the Fat Body and Hemocyte Motility. PMID:27467079
A Class of Diacylglycerol Acyltransferase 1 Inhibitors Identified by a Combination of Phenotypic High-throughput Screening, Genomics, and Genetics. PMID:27428418
Initial characterization of a Syap1 knock-out mouse and distribution of Syap1 in mouse brain and cultured motoneurons. PMID:27344443
Drosophila Embryos as a Model for Wound-Induced Transcriptional Dynamics: Genetic Strategies to Achieve a Localized Wound Response. PMID:27274436
A robust (re-)annotation approach to generate unbiased mapping references for RNA-seq-based analyses of differential expression across closely related species. PMID:27220689
Identification of Bari Transposons in 23 Sequenced Drosophila Genomes Reveals Novel Structural Variants, MITEs and Horizontal Transfer. PMID:27213270
Representation of anatomy in online atlases and databases: a survey and collection of patterns for interface design. PMID:27206491
Comparative Expression Dynamics of Intergenic Long Noncoding RNAs in the Genus Drosophila. PMID:27189981
A critical role for the Drosophila dopamine D1-like receptor Dop1R2 at the onset of metamorphosis. PMID:27184815
Down syndrome cell adhesion molecule 1: testing for a role in insect immunity, behaviour and reproduction. PMID:27152227
Complete genomes of Hairstreak butterflies, their speciation, and nucleo-mitochondrial incongruence. PMID:27120974
Classification of Promoters Based on the Combination of Core Promoter Elements Exhibits Different Histone Modification Patterns. PMID:27003446
A New Fiji-Based Algorithm That Systematically Quantifies Nine Synaptic Parameters Provides Insights into Drosophila NMJ Morphometry. PMID:26998933
MAPK15 upregulation promotes cell proliferation and prevents DNA damage in male germ cell tumors. PMID:26988910
Speciation in Cloudless Sulphurs Gleaned from Complete Genomes. PMID:26951782
Mood stabilizing drugs regulate transcription of immune, neuronal and metabolic pathway genes in Drosophila. PMID:26852229
The histone demethylase dKDM5/LID interacts with the SIN3 histone deacetylase complex and shares functional similarities with SIN3. PMID:26848313
Zfrp8/PDCD2 Interacts with RpS2 Connecting Ribosome Maturation and Gene-Specific Translation. PMID:26807849
Diverse Hormone Response Networks in 41 Independent Drosophila Cell Lines. PMID:26772746
Genome-Wide Analysis Reveals Novel Regulators of Growth in Drosophila melanogaster. PMID:26751788
Cross-Study Comparison Reveals Common Genomic, Network, and Functional Signatures of Desiccation Resistance in Drosophila melanogaster. PMID:26733490
Comparison of normalization and differential expression analyses using RNA-Seq data from 726 individual Drosophila melanogaster. PMID:26732976
Urm1: an essential regulator of JNK signaling and oxidative stress in Drosophila melanogaster. PMID:26715182
A new level of plasticity: Drosophila smooth-like testes muscles compensate failure of myoblast fusion. PMID:26657767
RNA-seq reveals post-transcriptional regulation of Drosophila insulin-like peptide dilp8 and the neuropeptide-like precursor Nplp2 by the exoribonuclease Pacman/XRN1. PMID:26656493
Multipotent versus differentiated cell fate selection in the developing Drosophila airways. PMID:26633813
Identifying Loci Contributing to Natural Variation in Xenobiotic Resistance in Drosophila. PMID:26619284
Preadult life history variation determines adult transcriptome expression. PMID:26615085
The wavy Mutation Maps to the Inositol 1,4,5-Trisphosphate 3-Kinase 2 (IP3K2) Gene of Drosophila and Interacts with IP3R to Affect Wing Development. PMID:26613949
Shared Genetic Signals of Hypoxia Adaptation in Drosophila and in High-Altitude Human Populations. PMID:26576852
Genetic architecture of natural variation in cuticular hydrocarbon composition in Drosophila melanogaster. PMID:26568309
Genetics on the Fly: A Primer on the Drosophila Model System. PMID:26564900
Genetic basis of natural variation in body pigmentation in Drosophila melanogaster. PMID:26554300
Disruption of Methionine Metabolism in Drosophila melanogaster Impacts Histone Methylation and Results in Loss of Viability. PMID:26546310
Cnidaria: fast, reference-free clustering of raw and assembled genome and transcriptome NGS data. PMID:26525298
Sxl-Dependent, tra/tra2-Independent Alternative Splicing of the Drosophila melanogaster X-Linked Gene found in neurons. PMID:26511498
Molecular Evolution of Drosophila Germline Stem Cell and Neural Stem Cell Regulating Genes. PMID:26507797
Dosage Compensation of X-Linked Muller Element F Genes but Not X-Linked Transgenes in the Australian Sheep Blowfly. PMID:26506426
Polymorphisms in early neurodevelopmental genes affect natural variation in alcohol sensitivity in adult drosophila. PMID:26503115
Identification of dopamine receptors across the extant avian family tree and analysis with other clades uncovers a polyploid expansion among vertebrates. PMID:26500483
Rootletin organizes the ciliary rootlet to achieve neuron sensory function in Drosophila. PMID:26483560
Genome sequence of the Asian Tiger mosquito, Aedes albopictus, reveals insights into its biology, genetics, and evolution. PMID:26483478
Ribbon regulates morphogenesis of the Drosophila embryonic salivary gland through transcriptional activation and repression. PMID:26477561
Lateral and End-On Kinetochore Attachments Are Coordinated to Achieve Bi-orientation in Drosophila Oocytes. PMID:26473960
FlyBase: establishing a Gene Group resource for Drosophila melanogaster. PMID:26467478
An Amino-Terminal Polo Kinase Interaction Motif Acts in the Regulation of Centrosome Formation and Reveals a Novel Function for centrosomin (cnn) in Drosophila. PMID:26447129
Drosophila as an In Vivo Model for Human Neurodegenerative Disease. PMID:26447127
Discovery of progenitor cell signatures by time-series synexpression analysis during Drosophila embryonic cell immortalization. PMID:26438832
Reassignment of Drosophila willistoni Genome Scaffolds to Chromosome II Arms. PMID:26438290
Genome-Wide Detection and Analysis of Multifunctional Genes. PMID:26436655
Loss of the Drosophila melanogaster DEAD box protein Ddx1 leads to reduced size and aberrant gametogenesis. PMID:26433063
Recombining without Hotspots: A Comprehensive Evolutionary Portrait of Recombination in Two Closely Related Species of Drosophila. PMID:26430062
DAPPER: a data-mining resource for protein-protein interactions. PMID:26405458
Codon and Amino Acid Usage Are Shaped by Selection Across Divergent Model Organisms of the Pancrustacea. PMID:26384771
Tiling Assembly: a new tool for reference annotation-independent transcript assembly and novel gene identification by RNA-sequencing. PMID:26341416
Live imaging of Tribolium castaneum embryonic development using light-sheet-based fluorescence microscopy. PMID:26334868
Skipper genome sheds light on unique phenotypic traits and phylogeny. PMID:26311350
The Drosophila bag of marbles Gene Interacts Genetically with Wolbachia and Shows Female-Specific Effects of Divergence. PMID:26291077
E-cadherin-defective gastric cancer cells depend on Laminin to survive and invade. PMID:26246502
The Spalt Transcription Factors Generate the Transcriptional Landscape of the Drosophila melanogaster Wing Pouch Central Region. PMID:26241320
Patterns of differential gene expression in adult rotation-resistant and wild-type western corn rootworm digestive tracts. PMID:26240606
Analysis of phylogenomic datasets reveals conflict, concordance, and gene duplications with examples from animals and plants. PMID:26239519
The genetic architecture of sexually selected traits in two natural populations of Drosophila montana. PMID:26198076
The Discovery, Distribution, and Evolution of Viruses Associated with Drosophila melanogaster. PMID:26172158
RNA editing differently affects protein-coding genes in D. melanogaster and H. sapiens. PMID:26169954
Survival Rate and Transcriptional Response upon Infection with the Generalist Parasite Beauveria bassiana in a World-Wide Sample of Drosophila melanogaster. PMID:26154519
Independent Effects of γ-Aminobutyric Acid Transaminase (GABAT) on Metabolic and Sleep Homeostasis. PMID:26124278
Variation in the X:Autosome Distribution of Male-Biased Genes among Drosophila melanogaster Tissues and Its Relationship with Dosage Compensation. PMID:26108491
Genetic architecture of natural variation in Drosophila melanogaster aggressive behavior. PMID:26100892
Increased autophagy and apoptosis contribute to muscle atrophy in a myotonic dystrophy type 1 Drosophila model. PMID:26092529
The Levels of a Universally Conserved tRNA Modification Regulate Cell Growth. PMID:26063805
Drosophila Hook-Related Protein (Girdin) Is Essential for Sensory Dendrite Formation. PMID:26058848
Molecular Mechanisms and Evolutionary Processes Contributing to Accelerated Divergence of Gene Expression on the Drosophila X Chromosome. PMID:26041937
Draper/CED-1 mediates an ancient damage response to control inflammatory blood cell migration in vivo. PMID:26028435
Drosophila Cyclin G and epigenetic maintenance of gene expression during development. PMID:25995770
Wax, sex and the origin of species: Dual roles of insect cuticular hydrocarbons in adaptation and mating. PMID:25988392
Identification and characterisation of putative seminal fluid proteins from male reproductive tissue EST libraries in tiger beetles. PMID:25981911
Genetic Architecture of Micro-Environmental Plasticity in Drosophila melanogaster. PMID:25943032
Genetic Architecture of Abdominal Pigmentation in Drosophila melanogaster. PMID:25933381
Longevity GWAS Using the Drosophila Genetic Reference Panel. PMID:25922346
Comparative Genomics Reveals the Origins and Diversity of Arthropod Immune Systems. PMID:25908671
snoRNAs are a novel class of biologically relevant Myc targets. PMID:25888729
Are Convergent and Parallel Amino Acid Substitutions in Protein Evolution More Prevalent Than Neutral Expectations? PMID:25862140
Exploring the Phenotypic Space and the Evolutionary History of a Natural Mutation in Drosophila melanogaster. PMID:25862139
Positive Selection at the Polyhomeotic Locus Led to Decreased Thermosensitivity of Gene Expression in Temperate Drosophila melanogaster. PMID:25855066
X Chromosome and Autosome Dosage Responses in Drosophila melanogaster Heads. PMID:25850426
Biochemical functional predictions for protein structures of unknown or uncertain function. PMID:25848497
A library of MiMICs allows tagging of genes and reversible, spatial and temporal knockdown of proteins in Drosophila. PMID:25824290
Controlled expression of Drosophila homeobox loci using the Hostile takeover system. PMID:25820349
Drosophila and experimental neurology in the post-genomic era. PMID:25814441
Constraints, independence, and evolution of thermal plasticity: probing genetic architecture of long- and short-term thermal acclimation. PMID:25805817
Identification of singles bar as a direct transcriptional target of Drosophila Myocyte enhancer factor-2 and a regulator of adult myoblast fusion. PMID:25797154
Improved statistical methods enable greater sensitivity in rhythm detection for genome-wide data. PMID:25793520
Expression of multiple horizontally acquired genes is a hallmark of both vertebrate and invertebrate genomes. PMID:25785303
Death following traumatic brain injury in Drosophila is associated with intestinal barrier dysfunction. PMID:25742603
Evolution of an epigenetic gene ensemble within the genus Anopheles. PMID:25724208
acal is a long non-coding RNA in JNK signaling in epithelial shape changes during drosophila dorsal closure. PMID:25710168
Web resources for model organism studies. PMID:25707592
Identifying transcriptional cis-regulatory modules in animal genomes. PMID:25704908
Tiger Swallowtail Genome Reveals Mechanisms for Speciation and Caterpillar Chemical Defense. PMID:25683714
Discovery of transcription factors and regulatory regions driving in vivo tumor development by ATAC-seq and FAIRE-seq open chromatin profiling. PMID:25679813
P-TEFb, the super elongation complex and mediator regulate a subset of non-paused genes during early Drosophila embryo development. PMID:25679530
Regions within a single epidermal cell of Drosophila can be planar polarised independently. PMID:25671242
Evolutionary and functional analysis of the invariant SWIM domain in the conserved Shu2/SWS1 protein family from Saccharomyces cerevisiae to Homo sapiens. PMID:25659377
Evidence for a sexual dimorphism in gene expression noise in metazoan species. PMID:25649874
Genome-wide features of neuroendocrine regulation in Drosophila by the basic helix-loop-helix transcription factor DIMMED. PMID:25634895
Evidence for active maintenance of phylotranscriptomic hourglass patterns in animal and plant embryogenesis. PMID:25631928
Fruit flies in biomedical research. PMID:25624315
The intersection of the extrinsic hedgehog and WNT/wingless signals with the intrinsic Hox code underpins branching pattern and tube shape diversity in the drosophila airways. PMID:25615601
RNAi screening of developmental toolkit genes: a search for novel wing genes in the red flour beetle, Tribolium castaneum. PMID:25613748
Rice stripe virus affects the viability of its vector offspring by changing developmental gene expression in embryos. PMID:25601039
Doubling up on the fly: NeuroMorpho.Org Meets Big Data. PMID:25576225
Calcium waves occur as Drosophila oocytes activate. PMID:25564670
Uncovering the novel characteristics of Asian honey bee, Apis cerana, by whole genome sequencing. PMID:25553907
Genomics of ecological adaptation in cactophilic Drosophila. PMID:25552534
Transcriptional activation is a conserved feature of the early embryonic factor Zelda that requires a cluster of four zinc fingers for DNA binding and a low-complexity activation domain. PMID:25538246
Histone acetyltransferase Enok regulates oocyte polarization by promoting expression of the actin nucleation factor spire. PMID:25512562
The NuRD nucleosome remodelling complex and NHK-1 kinase are required for chromosome condensation in oocytes. PMID:25501812
Non-coding roX RNAs prevent the binding of the MSL-complex to heterochromatic regions. PMID:25501352
Drosophila Symplekin localizes dynamically to the histone locus body and tricellular junctions. PMID:25493544
Analysis of neurotransmitter tissue content of Drosophila melanogaster in different life stages. PMID:25437353
Characterization of the Drosophila group ortholog to the amino-terminus of the alpha-thalassemia and mental retardation X-Linked (ATRX) vertebrate protein. PMID:25437195
Non-coding RNA gene families in the genomes of anopheline mosquitoes. PMID:25432596
The BioGRID interaction database: 2015 update. PMID:25428363
OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software. PMID:25428351
SuperFly: a comparative database for quantified spatio-temporal gene expression patterns in early dipteran embryos. PMID:25404137
FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations. PMID:25398896
Beadex function in the motor neurons is essential for female reproduction in Drosophila melanogaster. PMID:25396431
Enzymatic generation of peptides flanked by basic amino acids to obtain MS/MS spectra with 2× sequence coverage. PMID:25380496
siRNAs from an X-linked satellite repeat promote X-chromosome recognition in Drosophila melanogaster. PMID:25368194
Survival of the fittest tools. PMID:25316776
Genome of the house fly, Musca domestica L., a global vector of diseases with adaptations to a septic environment. PMID:25315136
Phylostratigraphic bias creates spurious patterns of genome evolution. PMID:25312911
Subcellular localisations of the CPTI collection of YFP-tagged proteins in Drosophila embryos. PMID:25294944
Dynamic epigenetic control of highly conserved noncoding elements. PMID:25289637
Spermitin: a novel mitochondrial protein in Drosophila spermatids. PMID:25265054
Large-scale identification of chemically induced mutations in Drosophila melanogaster. PMID:25258387
Population- and sex-biased gene expression in the excretion organs of Drosophila melanogaster. PMID:25246242
Evidence for the plasticity of arthropod signal transduction pathways. PMID:25213332
Structural basis for the assembly of the Sxl-Unr translation regulatory complex. PMID:25209665
Combover/CG10732, a novel PCP effector for Drosophila wing hair formation. PMID:25207969
Genomics: Hiding in plain sight. PMID:25164742
Expression pattern of glycoside hydrolase genes in Lutzomyia longipalpis reveals key enzymes involved in larval digestion. PMID:25140153
Maternal control of the Drosophila dorsal-ventral body axis. PMID:25124754
An inverse small molecule screen to design a chemically defined medium supporting long-term growth of Drosophila cell lines. PMID:25096480
Galactokinase is a novel modifier of calcineurin-induced cardiomyopathy in Drosophila. PMID:25081566
Pogo-like transposases have been repeatedly domesticated into CENP-B-related proteins. PMID:25062917
CutProtFam-Pred: detection and classification of putative structural cuticular proteins from sequence alone, based on profile hidden Markov models. PMID:24978609
The gene expression database for mouse development (GXD): putting developmental expression information at your fingertips. PMID:24958384
Representing kidney development using the gene ontology. PMID:24941002
Online GESS: prediction of miRNA-like off-target effects in large-scale RNAi screen data by seed region analysis. PMID:24934636
Genome-scale functional characterization of Drosophila developmental enhancers in vivo. PMID:24896182
MORPHIN: a web tool for human disease research by projecting model organism biology onto a human integrated gene network. PMID:24861622
BioCreative-IV virtual issue. PMID:24852177
High resolution structure of cleaved Serpin 42 Da from Drosophila melanogaster. PMID:24758516
Cadherin 99C regulates apical expansion and cell rearrangement during epithelial tube elongation. PMID:24718992
tagtog: interactive and text-mining-assisted annotation of gene mentions in PLOS full-text articles. PMID:24715220
Phenotype ontologies and cross-species analysis for translational research. PMID:24699242
Molecular characterization and evolution of a gene family encoding both female- and male-specific reproductive proteins in Drosophila. PMID:24682282
Resources for functional genomics studies in Drosophila melanogaster. PMID:24653003
A genomic perspective to assessing quality of mass-reared SIT flies used in Mediterranean fruit fly (Ceratitis capitata) eradication in California. PMID:24495485