FlyBase Controlled Vocabulary
Names
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FlyBase Controlled Vocabulary
metasource: Fairsharing.org
version: FAIRsharing.org: FBcv; FlyBase Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.6tgyxf; Last edited: June 15, 2021, 2:06 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 2022-10-20 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FB-CV
FBcv
metasource: Fairsharing.org
version: FAIRsharing.org: FBcv; FlyBase Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.6tgyxf; Last edited: June 15, 2021, 2:06 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
FB-CV
metasource: Biontology / Bioportal
version: 2022-10-20 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FB-CV
Names
More detailed information about this field from each metasource.
FlyBase Controlled Vocabulary
metasource: Fairsharing.orgversion: FAIRsharing.org: FBcv; FlyBase Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.6tgyxf; Last edited: June 15, 2021, 2:06 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 2022-10-20 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FB-CV
FBcv
metasource: Fairsharing.orgversion: FAIRsharing.org: FBcv; FlyBase Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.6tgyxf; Last edited: June 15, 2021, 2:06 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
FB-CV
metasource: Biontology / Bioportalversion: 2022-10-20 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FB-CV
Names
More detailed information about this field from each metasource.
FlyBase Controlled Vocabulary
metasource: Fairsharing.orgversion: FAIRsharing.org: FBcv; FlyBase Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.6tgyxf; Last edited: June 15, 2021, 2:06 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 2022-10-20 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FB-CV
FBcv
metasource: Fairsharing.orgversion: FAIRsharing.org: FBcv; FlyBase Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.6tgyxf; Last edited: June 15, 2021, 2:06 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
FB-CV
metasource: Biontology / Bioportalversion: 2022-10-20 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FB-CV
A structured controlled vocabulary developed and used by FlyBase, including the Drosophila phenotype ontology. It is used in annotation and classification of data related to Drosophila, including phenotypes and expression.
Description
More detailed information about this field from each metasource.
A structured controlled vocabulary developed and used by FlyBase, including the Drosophila phenotype ontology. It is used in annotation and classification of data related to Drosophila, including phenotypes and expression.
metasource: Fairsharing.orgversion: FAIRsharing.org: FBcv; FlyBase Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.6tgyxf; Last edited: June 15, 2021, 2:06 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
A structured controlled vocabulary used for various aspects of annotation by FlyBase. It includes the Drosophila Phenotype Ontology (DPO) which is also released separately. This ontology is maintained by FlyBase for various aspects of annotation not covered, or not yet covered, by other OBO ontologies. If and when community ontologies are available for the domains here covered FlyBase will use them.
metasource: Biontology / Bioportalversion: 2022-10-20 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FB-CV
Webpage:
https://github.com/FlyBase/flybase-controlled-vocabularyWebpage
More detailed information about this field from each metasource.
https://github.com/FlyBase/flybase-controlled-vocabulary
metasource: Fairsharing.orgversion: FAIRsharing.org: FBcv; FlyBase Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.6tgyxf; Last edited: June 15, 2021, 2:06 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
http://purl.obolibrary.org/obo/fbcv
metasource: Biontology / Bioportalversion: 2022-10-20 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FB-CV
Publications:
Publications
More detailed information about this field from each metasource.
The Drosophila phenotype ontology
PMID: 24138933
metasource: Fairsharing.org
version: FAIRsharing.org: FBcv; FlyBase Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.6tgyxf; Last edited: June 15, 2021, 2:06 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Publications
More detailed information about this field from each metasource.
The Drosophila phenotype ontology
PMID: 24138933
metasource: Fairsharing.org
version: FAIRsharing.org: FBcv; FlyBase Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.6tgyxf; Last edited: June 15, 2021, 2:06 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
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The Drosophila phenotype ontology
PubMed citations: 16.
16 articles citing: The Drosophila phenotype ontology
Harmonizing model organism data in the Alliance of Genome Resources. PMID:35380658
The Human Phenotype Ontology in 2021. PMID:33264411
Transforming the study of organisms: Phenomic data models and knowledge bases. PMID:33232313
The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species. PMID:31701156
The OWL Reasoner Evaluation (ORE) 2015 Competition Report. PMID:30069067
Knowledge Discovery in Biological Databases for Revealing Candidate Genes Linked to Complex Phenotypes. PMID:28609292
The anatomy of phenotype ontologies: principles, properties and applications. PMID:28387809
Exploring FlyBase Data Using QuickSearch. PMID:27930807
FlyBase at 25: looking to the future. PMID:27799470
Using FlyBase, a Database of Drosophila Genes and Genomes. PMID:27730573
Global changes of the RNA-bound proteome during the maternal-to-zygotic transition in Drosophila. PMID:27378189
My Corporis Fabrica Embryo: An ontology-based 3D spatio-temporal modeling of human embryo development. PMID:26413258
Cross-organism analysis using InterMine. PMID:26097192
Expanding the mammalian phenotype ontology to support automated exchange of high throughput mouse phenotyping data generated by large-scale mouse knockout screens. PMID:25825651
Patterns of positive selection in seven ant genomes. PMID:24782441
Phenotype ontologies and cross-species analysis for translational research. PMID:24699242
Tags:
Tags
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gene expression data
metasource: Fairsharing.org
version: FAIRsharing.org: FBcv; FlyBase Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.6tgyxf; Last edited: June 15, 2021, 2:06 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
phenotype
metasource: Fairsharing.org
version: FAIRsharing.org: FBcv; FlyBase Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.6tgyxf; Last edited: June 15, 2021, 2:06 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Tags
More detailed information about this field from each metasource.
gene expression data
metasource: Fairsharing.orgversion: FAIRsharing.org: FBcv; FlyBase Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.6tgyxf; Last edited: June 15, 2021, 2:06 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
phenotype
metasource: Fairsharing.orgversion: FAIRsharing.org: FBcv; FlyBase Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.6tgyxf; Last edited: June 15, 2021, 2:06 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
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