miRPathDB
Dictionary on miRNAs and their putative target pathways
Description
More detailed information about this field from each metasource.
Dictionary on miRNAs and their putative target pathways
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
A novel release of the miRNA Pathway Dictionary Database. Since the initial release of miRPathDB, tremendous progress has been made in the field of microRNA (miRNA) research. New miRNA reference databases have emerged, a vast amount of new miRNA candidates has been discovered and the number of experimentally validated target genes has increased considerably. Hence, the demand for a major upgrade of miRPathDB, including extended analysis functionality and intuitive visualizations of query results has emerged. Here, we present the novel release 2.0 of the miRNA Pathway Dictionary Database (miRPathDB) that is freely accessible at https: mpd.bioinf.uni-sb.de. miRPathDB 2.0 comes with a ten-fold increase of pre-processed data.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:59.904556
Webpage:
https://mpd.bioinf.uni-sb.de/Webpage
More detailed information about this field from each metasource.
https://mpd.bioinf.uni-sb.de/
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:59.904556
Publications:
Publications
More detailed information about this field from each metasource.
miRPathDB 2.0: a novel release of the miRNA Pathway Dictionary Database
PMID: 31691816
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:59.904556
http://dx.doi.org/10.1093/nar/1921
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications
More detailed information about this field from each metasource.
miRPathDB 2.0: a novel release of the miRNA Pathway Dictionary Database
PMID: 31691816
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:59.904556
http://dx.doi.org/10.1093/nar/1921
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
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miRPathDB 2.0: a novel release of the miRNA Pathway Dictionary Database
PubMed citations: 39.
39 articles citing: miRPathDB 2.0: a novel release of the miRNA Pathway Dictionary Database
Exosomes derived from differentiated human ADMSC with the Schwann cell phenotype modulate peripheral nerve-related cellular functions. PMID:35310346
Identification of Genetic Networks Reveals Complex Associations and Risk Trajectory Linking Mild Cognitive Impairment to Alzheimer's Disease. PMID:35250545
Overexpression of miR-200b-3p in Menstrual Blood-Derived Mesenchymal Stem Cells from Endometriosis Women. PMID:35075610
Marathon-Induced Cardiac Strain as Model for the Evaluation of Diagnostic microRNAs for Acute Myocardial Infarction. PMID:35011745
Orange Juice Attenuates Circulating miR-150-5p, miR-25-3p, and miR-451a in Healthy Smokers: A Randomized Crossover Study. PMID:35004810
MicroRNA-210 regulates the metabolic and inflammatory status of primary human astrocytes. PMID:34991629
LE-MDCAP: A Computational Model to Prioritize Causal miRNA-Disease Associations. PMID:34948403
Transient Hyperglycemia and Hypoxia Induce Memory Effects in AngiomiR Expression Profiles of Feto-Placental Endothelial Cells. PMID:34948175
Expression of plasma IFN signaling-related miRNAs during acute SARS-CoV-2 infection and its association with RBD-IgG antibody response. PMID:34876159
Bioinformatic Tools for the Analysis and Prediction of ncRNA Interactions. PMID:34768830
Human microRNA similarity in breast cancer. PMID:34612484
RNA-RNA interactions between SARS-CoV-2 and host benefit viral development and evolution during COVID-19 infection. PMID:34585235
Making use of transcription factor enrichment to identify functional microRNA-regulons. PMID:34522293
In silico identification of MicroRNAs targeting the key nucleator of stress granules, G3BP: Promising therapeutics for SARS-CoV-2 infection. PMID:34456603
Serum circulating proteins from pediatric patients with dilated cardiomyopathy cause pathologic remodeling and cardiomyocyte stiffness. PMID:34383712
A Potential circRNA-miRNA-mRNA Regulatory Network in Asthmatic Airway Epithelial Cells Identified by Integrated Analysis of Microarray Datasets. PMID:34336929
A panel of miRNAs as prognostic markers for African-American patients with triple negative breast cancer. PMID:34315420
Genetic Determinants Highlight the Existence of Shared Etiopathogenetic Mechanisms Characterizing Age-Related Macular Degeneration and Neurodegenerative Disorders. PMID:34135841
miRTargetLink 2.0-interactive miRNA target gene and target pathway networks. PMID:34009375
Salmonella enterica Serovar Typhimurium SPI-1 and SPI-2 Shape the Global Transcriptional Landscape in a Human Intestinal Organoid Model System. PMID:34006652
Non-coding RNAs in cancer-associated cachexia: clinical implications and future perspectives. PMID:33915516
Circular RNA hsa_circ_0000700 promotes cell proliferation and migration in Esophageal Squamous Cell Carcinoma by sponging miR-1229. PMID:33854621
miRNA Regulatory Functions in Farm Animal Diseases, and Biomarker Potentials for Effective Therapies. PMID:33802936
The Regulatory Cross-Talk between microRNAs and Novel Members of the B7 Family in Human Diseases: A Scoping Review. PMID:33800752
Extracellular Vesicles Derived From Adult and Fetal Bone Marrow Mesenchymal Stromal Cells Differentially Promote ex vivo Expansion of Hematopoietic Stem and Progenitor Cells. PMID:33718342
Integrative approaches for analysis of mRNA and microRNA high-throughput data. PMID:33680358
Endothelial cells response to neutrophil-derived extracellular vesicles miRNAs in anti-PR3 positive vasculitis. PMID:33527387
Structural Variability, Expression Profile, and Pharmacogenetic Properties of TMPRSS2 Gene as a Potential Target for COVID-19 Therapy. PMID:33375616
Cellular, Extracellular and Extracellular Vesicular miRNA Profiles of Pre-Ovulatory Follicles Indicate Signaling Disturbances in Polycystic Ovaries. PMID:33333986
Validation of human microRNA target pathways enables evaluation of target prediction tools. PMID:33305319
Common diseases alter the physiological age-related blood microRNA profile. PMID:33235214
HumiR: Web Services, Tools and Databases for Exploring Human microRNA Data. PMID:33233537
Sulforaphane Promotes Dendritic Cell Stimulatory Capacity Through Modulation of Regulatory Molecules, JAK/STAT3- and MicroRNA-Signaling. PMID:33193420
The Physiological MicroRNA Landscape in Nipple Aspirate Fluid: Differences and Similarities with Breast Tissue, Breast Milk, Plasma and Serum. PMID:33187146
Systematics for types and effects of RNA variations. PMID:32951567
Small RNA fingerprinting of Alzheimer's disease frontal cortex extracellular vesicles and their comparison with peripheral extracellular vesicles. PMID:32922692
Computational Methods and Software Tools for Functional Analysis of miRNA Data. PMID:32872205
Small RNA Deep Sequencing Identifies a Unique miRNA Signature Released in Serum Exosomes in a Mouse Model of Sjögren's Syndrome. PMID:32849505
miEAA 2.0: integrating multi-species microRNA enrichment analysis and workflow management systems. PMID:32374865 - http://dx.doi.org/10.1093/nar/1921
Tags:
Tags
More detailed information about this field from each metasource.
rna sequence databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
functional, regulatory and non-coding rna
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:59.904556
small molecules
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:59.904556
molecular interactions, pathways and networks
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:59.904556
Tags
More detailed information about this field from each metasource.
rna sequence databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
functional, regulatory and non-coding rna
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:59.904556
small molecules
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:59.904556
molecular interactions, pathways and networks
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:59.904556
rna sequence functional, regulatory and non-coding rna small molecule molecular interactions, pathways and networks
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