miRGator v2.0
miRGator is an integrated database of microRNA (miRNA)-associated gene expression, target prediction, disease association and genomic annotation for the functional investigation of miRNA. miRGator v2.0 contains information about : 1) Human miRNA expression profiles under various experimental conditions, 2) Gene expression profiles under miRNA-perturbation (e.g. miRNA knockout and overexpression), 3) Known and predicted miRNA targets, 4) MicroRNA-disease associations.
Description
More detailed information about this field from each metasource.
miRGator is an integrated database of microRNA (miRNA)-associated gene expression, target prediction, disease association and genomic annotation for the functional investigation of miRNA. miRGator v2.0 contains information about : 1) Human miRNA expression profiles under various experimental conditions, 2) Gene expression profiles under miRNA-perturbation (e.g. miRNA knockout and overexpression), 3) Known and predicted miRNA targets, 4) MicroRNA-disease associations.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:23.711144
Webpage:
http://miRGator.kobic.re.krWebpage
More detailed information about this field from each metasource.
Publications:
Publications
More detailed information about this field from each metasource.
miRGator v2.0: an integrated system for functional investigation of microRNAs
PMID: 21062822
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:23.711144
Publications
More detailed information about this field from each metasource.
miRGator v2.0: an integrated system for functional investigation of microRNAs
PMID: 21062822
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:23.711144
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miRGator v2.0: an integrated system for functional investigation of microRNAs
PubMed citations: 24.
24 articles citing: miRGator v2.0: an integrated system for functional investigation of microRNAs
miRNAs target databases: developmental methods and target identification techniques with functional annotations. PMID:28204845
MicroRNA regulatory pathway analysis identifies miR-142-5p as a negative regulator of TGF-β pathway via targeting SMAD3. PMID:27683030
Integrating genetics and epigenetics in breast cancer: biological insights, experimental, computational methods and therapeutic potential. PMID:26391647
ComiRNet: a web-based system for the analysis of miRNA-gene regulatory networks. PMID:26051695
Global population-specific variation in miRNA associated with cancer risk and clinical biomarkers. PMID:25169894
miRror-Suite: decoding coordinated regulation by microRNAs. PMID:24907353
ToppMiR: ranking microRNAs and their mRNA targets based on biological functions and context. PMID:24829448
In-Silico Algorithms for the Screening of Possible microRNA Binding Sites and Their Interactions. PMID:24082822
targetHub: a programmable interface for miRNA-gene interactions. PMID:24013925
ProteoMirExpress: inferring microRNA and protein-centered regulatory networks from high-throughput proteomic and mRNA expression data. PMID:23924514
A new algorithm for integrated analysis of miRNA-mRNA interactions based on individual classification reveals insights into bladder cancer. PMID:23717626
De-regulated microRNAs in pediatric cancer stem cells target pathways involved in cell proliferation, cell cycle and development. PMID:23613887
Reuse of public genome-wide gene expression data. PMID:23269463
Bioinformatics Resource Manager v2.3: an integrated software environment for systems biology with microRNA and cross-species analysis tools. PMID:23174015
MirSNP, a database of polymorphisms altering miRNA target sites, identifies miRNA-related SNPs in GWAS SNPs and eQTLs. PMID:23173617
Tuning the engine: an introduction to resources on post-transcriptional regulation of gene expression. PMID:22995832
A pathway-based classification of breast cancer integrating data on differentially expressed genes, copy number variations and microRNA target genes. PMID:22983731
Context-specific microRNA analysis: identification of functional microRNAs and their mRNA targets. PMID:22977182
Antagonism pattern detection between microRNA and target expression in Ewing's sarcoma. PMID:22848594
Genome-wide search for miRNA-target interactions in Arabidopsis thaliana with an integrated approach. PMID:22759612
Combinatorial network of transcriptional regulation and microRNA regulation in human cancer. PMID:22691419
mirEX: a platform for comparative exploration of plant pri-miRNA expression data. PMID:22013167
Practical Aspects of microRNA Target Prediction. PMID:21342132
The 2011 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection. PMID:21177655
Tags:
Tags
More detailed information about this field from each metasource.
functional, regulatory and non-coding rna
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:23.711144
gene expression
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:23.711144
pathology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:23.711144
gene transcripts
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:23.711144
molecular interactions, pathways and networks
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:23.711144
Tags
More detailed information about this field from each metasource.
functional, regulatory and non-coding rna
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:23.711144
gene expression
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:23.711144
pathology
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:23.711144
gene transcripts
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:23.711144
molecular interactions, pathways and networks
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:23.711144
functional, regulatory and non-coding rna gene expression pathology gene transcripts molecular interactions, pathways and networks
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