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TRBase

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TRbase is a database relating tandem repeats to gene locations and disease genes in the human genome. This database identifies both perfect and imperfect tandem repeats of 1-2000 bp unit lengths. Tandem repeats can be selected according to a number of different parameters including repeat unit length, copy number of the repeats, total tandem repeat length, percentage matches and the consensus repeat pattern. Tandem repeats can be searched for in combination with other important features including disease loci, gene names, gene features, disease keywords and OMIM (Online Mendelian Inheritance in Man) numbers. TRbase can be accessed from http://trbase.ex.ac.uk/.

Description

More detailed information about this field from each metasource.

TRbase is a database relating tandem repeats to gene locations and disease genes in the human genome. This database identifies both perfect and imperfect tandem repeats of 1-2000 bp unit lengths. Tandem repeats can be selected according to a number of different parameters including repeat unit length, copy number of the repeats, total tandem repeat length, percentage matches and the consensus repeat pattern. Tandem repeats can be searched for in combination with other important features including disease loci, gene names, gene features, disease keywords and OMIM (Online Mendelian Inheritance in Man) numbers. TRbase can be accessed from http://trbase.ex.ac.uk/.

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

Webpage:

http://trbase.ex.ac.uk/

Webpage

More detailed information about this field from each metasource.

http://trbase.ex.ac.uk/

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

Tags:

Tags
More detailed information about this field from each metasource.

human and other vertebrate genomes
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

human genome databases, maps and viewers
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

human and other vertebrate genomes human genome, maps and viewers

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Data is amalgamated and only retrieved periodically.
Some of the resources used by the system:

® FAIRsharing.org
® Bioontology/Bioportal Terms
® Nucleic Acid Research - Database
® re3data.org
® bio.tools
® PubMed - Courtesy of the U.S. National Library of Medicine