Other names: stripy
A graphical application for detecting known pathogenic short tandem repeats in sequencing data
sequence composition, complexity and repeats dna mutation dna polymorphism biological
Tandem Repeats Database (TRDB) is a public repository of information on tandem repeats in genomic DNA and contains a variety of tools for their analysis.
Database and software for mitochondrial imperfect interspersed repeats annotation.
ProRepeat is an integrated curated repository and analysis platform for in-depth research on the biological characteristics of amino acid tandem repeats. ProRepeat collects repeats from all proteins i ...
Detects this family of direct repeats found in the DNA of many bacteria and archaea.
Gateway to publicly accessible CRISPRs database.
Sequence composition dynamics of genes and genomes.
An asynchronous server-based application for the prediction of leucine-rich repeat motifs and an integrative database of NOD-like receptors.
Polymorphic Simple Sequence Repeats Database
UniGene MicroSatellite database: short tandem repeats from various eukaryotic genomes
Polyglutamine Repeats in Proteins
Satellog is a database that catalogs all pure 1-16 repeat unit satellite repeats in the human genome along with supplementary data. Satellog analyzes each pure repeat in UniGene clusters for evidence ...
DbStRiPs (Database of structural repeats in proteins) is a structural repeat database which classifies a protein structure into a structural repeat family based on graph based structural repeat identi ...
TRbase is a database relating tandem repeats to gene locations and disease genes in the human genome. This database identifies both perfect and imperfect tandem repeats of 1-2000 bp unit lengths. Tand ...
Comprehensive analysis of SSRs and database construction using all complete gene-coding sequences in major horticultural and representative plants.
Repository for well-characterized elastin sequences to facilitate its study. The database has since expanded to include other non-elastin sequences that share elastic properties.
RepeatsDB (http://repeatsdb.bio.unipd.it/) is a database of annotated tandem repeat protein structures. Tandem repeats pose a difficult problem for the analysis of protein structures, as the underlyin ...
Plant Repeat Database (Plantre) provides re-annotated repeat sequences of plant using a uniform pipeline. The current version of plantrep contains 206.04Gb of 396,041,410 repeats from 459 species that ...
An extensive database for pan-species microsatellite investigation and marker development. A Django app for Pan-Species Microsatellite Database. Pan-Species Microsatellite Database. Microsatellites ...
The GenBank, EMBL, and DDBJ nucleic acid sequence data banks have from their inception used tables of sites and features to describe the roles and locations of higher order sequence domains and elemen ...
A web-based application for detecting microbial contaminants in next-generation sequencing data. OpenContami: Open Cell Microbial Contaminants by High-throughput Sequencing.