PED

Original standard text format for sample pedigree information and genotype calls.

Description

More detailed information about this field from each metasource.

Original standard text format for sample pedigree information and genotype calls.

metasource: Fairsharing.org
version: None

Webpage:

Tags:

Tags

More detailed information about this field from each metasource.

biological sample

metasource: Fairsharing.org
version: None

genotype

metasource: Fairsharing.org
version: None

FAM

A sample information file accompanying a .bed binary genotype table.

BIM

Extended variant information file accompanying a .bed binary genotype table.

Plant Editosome Database

The Plant Editosome Database (PED) is a curated database of plant RNA editing factors (editosomes). The data has been drawn from publications and organelle genome annotations. PED incorporates RNA edi ...

MAP

Variant information file accompanying a .ped text pedigree + genotype table.

Pancreatic Expression database

The Pancreatic Expression Database (PED) is a repository for pancreatic-derived -omics data. With a generic web-based system, the database provides the research community with an open access tool to m ...

Pairs file format

A standard text format for pairs of genomic loci given as 1bp point positions, applicable to chromosome conformation experiments. Pairs files are produced as intermediate files in most Hi-C analysis p ...

ChiroVox

A public library of bat calls

Investigation Study Assay JSON

Investigation Study Assay JSON (ISA-JSON) describes the ISA Abstract Model reference implementation specified using the JavaScript Object Notation (JSON) format, a text format for serializing structur ...

EBI BioSamples JSON Format

The EBI BioSamples JSON Format is a JSON schema used for submitting data to the EBI BioSamples database. This format can also be used to update or curate existing samples.

Protein Ensemble Database

The Protein Ensemble Database (PED) is an open access database for the deposition of structural ensembles including intrinsically disordered proteins

ENA Sequence Flat File Format

ENA Sequence Flat File Format is a standardised plain text format for nucleotide sequences. This format was previously called the EMBL Sequence Flat File Format.

Minimum Information Required for A Glycomics Experiment - Sample Preparation

MIRAGE (Minimum Information Required for A Glycomics Experiment) was created to improve the quality of glycomics data in the scientific literature. The sample preparation guidelines are designed to in ...

MetaSRA

MetaSRA is a database of normalized SRA human sample-specific metadata following a schema inspired by the metadata organization of the ENCODE project. This schema involves mapping samples to terms in ...

Standard Preanalytical Code

Standard Preanalytical Code (SPREC) identifies and records the main pre-analytical factors that may have impact on the integrity of sampled clinical fluids and solid biospecimens and their simple deri ...

FAANG metadata sample specification standard

The FAANG metadata sample specification document describes the principles and structure for the FAANG metadata guidance. The main goal of the FAANG standards is to ensure all FAANG samples are well de ...

Sample processing and separations controlled vocabulary

The sepCV is a controlled vocabulary for teminology associated with sample preparation and sample processing for proteomics. The sepCV was originally designed to provide terminology for the MIAPE GE r ...

BioSamples at the European Bioinformatics Institute

The BioSamples database aggregates sample information for reference samples (e.g. Coriell Cell lines) and samples for which data exist in one of the EBI's assay databases such as ArrayExpress, the Eur ...

COG-UK Viral Genome Sequences

COG-UK Consortium has published a dataset which contains over 20K SARS-CoV-2 viral genome sequences available as open access.

FAANG metadata experiment specification standard

The FAANG metadata experiment specification document describes the principles and structure for the FAANG metadata guidance. The main goal of the FAANG standards is to ensure all FAANG experiments are ...

Histoimmunogenetics Markup Language

Histoimmunogenetics Markup Language (HML) is intended as a potentially general-purpose XML format for exchanging genetic typing data. This format supports NGS based genotyping methods, raw sequence re ...

Previous Next

Webpage:

Tags:

Tags
More detailed information about this field from each metasource.

biological sample
metasource: Fairsharing.org
version: None

genotype
metasource: Fairsharing.org
version: None

More to explore:

1/20

FAM

BIM

Plant Editosome Database

MAP

Pancreatic Expression database

Pairs file format

ChiroVox

Investigation Study Assay JSON

EBI BioSamples JSON Format

Protein Ensemble Database

ENA Sequence Flat File Format

Minimum Information Required for A Glycomics Experiment - Sample Preparation

MetaSRA

Standard Preanalytical Code

FAANG metadata sample specification standard

Sample processing and separations controlled vocabulary

BioSamples at the European Bioinformatics Institute

COG-UK Viral Genome Sequences

FAANG metadata experiment specification standard

Histoimmunogenetics Markup Language

PED

Webpage:

Tags: Tags More detailed information about this field from each metasource. × biological sample metasource: Fairsharing.org version: None genotype metasource: Fairsharing.org version: None Close

More to explore:

1/20

FAM

BIM

Plant Editosome Database

MAP

Pancreatic Expression database

Pairs file format

ChiroVox

Investigation Study Assay JSON

EBI BioSamples JSON Format

Protein Ensemble Database

ENA Sequence Flat File Format

Minimum Information Required for A Glycomics Experiment - Sample Preparation

MetaSRA

Standard Preanalytical Code

FAANG metadata sample specification standard

Sample processing and separations controlled vocabulary

BioSamples at the European Bioinformatics Institute

COG-UK Viral Genome Sequences

FAANG metadata experiment specification standard

Histoimmunogenetics Markup Language

Tags:

Tags
More detailed information about this field from each metasource.

biological sample
metasource: Fairsharing.org
version: None

genotype
metasource: Fairsharing.org
version: None