FAM

BIM

Extended variant information file accompanying a .bed binary genotype table.

PED

Original standard text format for sample pedigree information and genotype calls.

MAP

Variant information file accompanying a .ped text pedigree + genotype table.

Food and Agriculture Microdata Catalogue

The Food and Agriculture Microdata (FAM) Catalogue provides an inventory of datasets collected through farm and household surveys which contain information related to agriculture, food security, and n ...

BiG-FAM

Biosynthetic gene cluster families

BioSamples at the European Bioinformatics Institute

The BioSamples database aggregates sample information for reference samples (e.g. Coriell Cell lines) and samples for which data exist in one of the EBI's assay databases such as ArrayExpress, the Eur ...

Minimum Information about Plant Phenotyping Experiment

MIAPPE is a reporting guideline for plant phenotyping experiments. It comprises a checklist, i.e., a list of attributes to describe an experiment so that it is understandable and replicable. It should ...

Minimum Information Required for A Glycomics Experiment - Sample Preparation

MIRAGE (Minimum Information Required for A Glycomics Experiment) was created to improve the quality of glycomics data in the scientific literature. The sample preparation guidelines are designed to in ...

MetaSRA

MetaSRA is a database of normalized SRA human sample-specific metadata following a schema inspired by the metadata organization of the ENCODE project. This schema involves mapping samples to terms in ...

Connectivity Table file format

A CT (Connectivity Table) file contains secondary structure information for a RNA sequence.

ICM binary file Format

ICM binary file Format is used in databases pertaining to structural biology and protein families. This format can be used for the graphical representation of RNA, DNA, and proteins interactions.

Binary Probe Map Format

The BPMAP file contains information relating to the design of the Affymetrix tiling arrays. The format of the BPMAP file is a binary file with data stored in big-endian format.

macromolecular Crystallographic Information File

PDBx/mmCIF is a dictionary of data archiving macromolecule crystallographic experiments and their results.

Clustered Data Table Format

This is a data table format used in the PUMAdb workflow to transform a .pcl file into a .cdt (clustered data table) file which contains the original data, but reordered, to reflect the clustering.

FAANG metadata sample specification standard

The FAANG metadata sample specification document describes the principles and structure for the FAANG metadata guidance. The main goal of the FAANG standards is to ensure all FAANG samples are well de ...

COG-UK Viral Genome Sequences

COG-UK Consortium has published a dataset which contains over 20K SARS-CoV-2 viral genome sequences available as open access.

EBI BioSamples JSON Format

The EBI BioSamples JSON Format is a JSON schema used for submitting data to the EBI BioSamples database. This format can also be used to update or curate existing samples.

Crystallographic Information Framework

The acronym CIF is used both for the Crystallographic Information File, the data exchange standard file format of Hall, Allen & Brown (1991) (see Documentation), and for the Crystallographic Informati ...

NCBI BioSample

The NCBI BioSample database stores submitter-supplied descriptive information, or metadata, about the biological materials from which data stored in NCBI’s primary data archives are derived. NCBI’s ar ...

Clusters of Orthologous Groups of Proteins: Phylogenetic classification of proteins encoded in complete genomes

Clusters of Orthologous Groups of proteins (COGs) were delineated by comparing protein sequences encoded in complete genomes, representing major phylogenetic lineages. Each COG consists of individual ...

Webpage:

Tags:

Tags
More detailed information about this field from each metasource.

biological sample
metasource: Fairsharing.org
version: None

phenotype
metasource: Fairsharing.org
version: None

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BIM

PED

MAP

Food and Agriculture Microdata Catalogue

BiG-FAM

BioSamples at the European Bioinformatics Institute

Minimum Information about Plant Phenotyping Experiment

Minimum Information Required for A Glycomics Experiment - Sample Preparation

MetaSRA

Connectivity Table file format

ICM binary file Format

Binary Probe Map Format

macromolecular Crystallographic Information File

Clustered Data Table Format

FAANG metadata sample specification standard

COG-UK Viral Genome Sequences

EBI BioSamples JSON Format

Crystallographic Information Framework

NCBI BioSample

Clusters of Orthologous Groups of Proteins: Phylogenetic classification of proteins encoded in complete genomes

FAM

Webpage:

Tags: Tags More detailed information about this field from each metasource. × biological sample metasource: Fairsharing.org version: None phenotype metasource: Fairsharing.org version: None Close

More to explore:

1/20

BIM

PED

MAP

Food and Agriculture Microdata Catalogue

BiG-FAM

BioSamples at the European Bioinformatics Institute

Minimum Information about Plant Phenotyping Experiment

Minimum Information Required for A Glycomics Experiment - Sample Preparation

MetaSRA

Connectivity Table file format

ICM binary file Format

Binary Probe Map Format

macromolecular Crystallographic Information File

Clustered Data Table Format

FAANG metadata sample specification standard

COG-UK Viral Genome Sequences

EBI BioSamples JSON Format

Crystallographic Information Framework

NCBI BioSample

Clusters of Orthologous Groups of Proteins: Phylogenetic classification of proteins encoded in complete genomes

Tags:

Tags
More detailed information about this field from each metasource.

biological sample
metasource: Fairsharing.org
version: None

phenotype
metasource: Fairsharing.org
version: None