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FAIRsharing.RvBRMp; Last edited: Sept. 20, 2019, 11:52 a.m.; Last accessed: Jan 03 2022 7:11 p.m.

Other names: .pairs

Names

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Pairs file format

metasource: Fairsharing.org
version: FAIRsharing.org: .pairs; Pairs file format; DOI: https://doi.org/10.25504/FAIRsharing.RvBRMp; Last edited: Sept. 20, 2019, 11:52 a.m.; Last accessed: Jan 03 2022 7:11 p.m.

.pairs

A standard text format for pairs of genomic loci given as 1bp point positions, applicable to chromosome conformation experiments. Pairs files are produced as intermediate files in most Hi-C analysis pipelines and can be indexed and queried by the Pairix software.

Description

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A standard text format for pairs of genomic loci given as 1bp point positions, applicable to chromosome conformation experiments. Pairs files are produced as intermediate files in most Hi-C analysis pipelines and can be indexed and queried by the Pairix software.

Webpage:

https://github.com/4dn-dcic/pairix/blob/master/pairs_format_specification.md

Webpage

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https://github.com/4dn-dcic/pairix/blob/master/pairs_format_specification.md

Licence:

Name: MIT Licence

Licence name

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MIT Licence

URL: https://opensource.org/licenses/mit

Licence URL

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https://opensource.org/licenses/mit

Tags:

Tags
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chromosome
metasource: Fairsharing.org
version: FAIRsharing.org: .pairs; Pairs file format; DOI: https://doi.org/10.25504/FAIRsharing.RvBRMp; Last edited: Sept. 20, 2019, 11:52 a.m.; Last accessed: Jan 03 2022 7:11 p.m.

chromosome

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Data is amalgamated and only retrieved periodically.
Some of the resources used by the system:

® FAIRsharing.org
® Bioontology/Bioportal Terms
® Nucleic Acid Research - Database
® re3data.org
® bio.tools
® PubMed - Courtesy of the U.S. National Library of Medicine