Standard Preanalytical Code
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Standard Preanalytical Code
metasource: Fairsharing.org
version: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
SPREC
metasource: Fairsharing.org
version: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
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Standard Preanalytical Code
metasource: Fairsharing.orgversion: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
SPREC
metasource: Fairsharing.orgversion: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
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Standard Preanalytical Code
metasource: Fairsharing.orgversion: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
SPREC
metasource: Fairsharing.orgversion: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
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Standard Preanalytical Code (SPREC) identifies and records the main pre-analytical factors that may have impact on the integrity of sampled clinical fluids and solid biospecimens and their simple derivatives during collection, processing and storage. SPREC comprises 7 elements for both fluid and solid samples, defining the sample and primary container type, periods of cold and warm ischemia, and subsequent handling steps including speed and temperature of centrifugation and final storage temperature.
Description
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Standard Preanalytical Code (SPREC) identifies and records the main pre-analytical factors that may have impact on the integrity of sampled clinical fluids and solid biospecimens and their simple derivatives during collection, processing and storage. SPREC comprises 7 elements for both fluid and solid samples, defining the sample and primary container type, periods of cold and warm ischemia, and subsequent handling steps including speed and temperature of centrifugation and final storage temperature.
metasource: Fairsharing.orgversion: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Webpage:
https://isber.site-ym.com/?page=sprecWebpage
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https://isber.site-ym.com/?page=sprec
metasource: Fairsharing.orgversion: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
Standard preanalytical coding for biospecimens: defining the sample PREanalytical code
PMID: 20332280
metasource: Fairsharing.org
version: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Standard preanalytical coding for biospecimens: review and implementation of the Sample PREanalytical Code (SPREC)
PMID: 24849886
metasource: Fairsharing.org
version: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Publications
More detailed information about this field from each metasource.
Standard preanalytical coding for biospecimens: defining the sample PREanalytical code
PMID: 20332280
metasource: Fairsharing.org
version: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Standard preanalytical coding for biospecimens: review and implementation of the Sample PREanalytical Code (SPREC)
PMID: 24849886
metasource: Fairsharing.org
version: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
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Standard preanalytical coding for biospecimens: defining the sample PREanalytical code
PubMed citations: 57.
57 articles citing: Standard preanalytical coding for biospecimens: defining the sample PREanalytical code
Laying the groundwork for the Biobank of Rare Malignant Neoplasms at the service of the Hellenic Network of Precision Medicine on Cancer. PMID:35169862
Radiotherapy biobanking: current landscape, opportunities, challenges, and future aspirations. PMID:34658150
Isolation and characterization of urine microvesicles from prostate cancer patients: different approaches, different visions. PMID:34579682
The biobank of barretos cancer hospital: 14 years of experience in cancer research. PMID:34216325
Urinary extracellular vesicles: A position paper by the Urine Task Force of the International Society for Extracellular Vesicles. PMID:34035881
Quality Considerations When Using Tissue Samples for Biomarker Studies in Cancer Research. PMID:33958852
The role of preservation in the variability of regenerative medicine products. PMID:33225043
Opportunities and Risks for Research Biobanks in the COVID-19 Era and Beyond. PMID:33047969
Effects of ex vivo ischemia time and delayed processing on quality of specimens in tissue biobank. PMID:33000275
Preoperative Fasting and General Anaesthesia Alter the Plasma Proteome. PMID:32867270
Extending the Minimum Information About BIobank Data Sharing Terminology to Describe Samples, Sample Donors, and Events. PMID:32302498
Enriching Personalized Endometrial Cancer Research with the Harmonization of Biobanking Standards. PMID:31694311
Trace biomarkers associated with spontaneous preterm birth from the maternal serum metabolome of asymptomatic nulliparous women - parallel case-control studies from the SCOPE cohort. PMID:31548567
Biobank Quality Management in the BBMRI.be Network. PMID:31294024
Rationalized Development of a Campus-Wide Cell Line Dataset for Implementation in the Biobank LIMS System at Bioresource Center Ghent. PMID:31294023
Planning, Implementing, and Running a Multicentre Preterm Birth Study with Biobank Resources in Brazil: The Preterm SAMBA Study. PMID:30775382
Cold Ischemia Score: An mRNA Assay for the Detection of Extended Cold Ischemia in Formalin-Fixed, Paraffin-Embedded Tissue. PMID:30562131
Standardized Assessment of Hereditary Ataxia Patients in Clinical Studies. PMID:30363623
Small Nucleolar RNA Score: An Assay to Detect Formalin-Overfixed Tissue. PMID:30234371
Aspects of Modern Biobank Activity - Comprehensive Review. PMID:29728978
[Preanalytics and biobanking : Influence of preanalytical factors on tissue sample quality]. PMID:29619508
Impact of red and processed meat and fibre intake on treatment outcomes among patients with chronic inflammatory diseases: protocol for a prospective cohort study of prognostic factors and personalised medicine. PMID:29439003
Understanding preanalytical variables and their effects on clinical biomarkers of oncology and immunotherapy. PMID:29258857
Loss of Myosin Vb in colorectal cancer is a strong prognostic factor for disease recurrence. PMID:29024942
Bias in recent miRBase annotations potentially associated with RNA quality issues. PMID:28701729
A critical analysis of cancer biobank practices in relation to biospecimen quality. PMID:28510101
The Global Genome Biodiversity Network (GGBN) Data Standard specification. PMID:27694206
Enhancing translational research in paediatric rheumatology through standardization. PMID:27652504
Hypoxia-responsive miR-210 promotes self-renewal capacity of colon tumor-initiating cells by repressing ISCU and by inducing lactate production. PMID:27589845
Use of metabolomics for the identification and validation of clinical biomarkers for preterm birth: Preterm SAMBA. PMID:27503110
Danish cohort of monozygotic inflammatory bowel disease twins: Clinical characteristics and inflammatory activity. PMID:27275097
LacaScore: a novel plasma sample quality control tool based on ascorbic acid and lactic acid levels. PMID:27199628
"Life in Data"--Outcome of a Multi-Disciplinary, Interactive Biobanking Conference Session on Sample Data. PMID:26808538
Biobanking of Exosomes in the Era of Precision Medicine: Are We There Yet? PMID:26712742
Challenges for quality management in implementation, maintenance, and sustainability of research tissue biobanks. PMID:26271995
Blood-sampling collection prior to surgery may have a significant influence upon biomarker concentrations measured. PMID:26236175
Identification of SOCS2 and SOCS6 as biomarkers in human colorectal cancer. PMID:25025962
How to design biospecimen identifiers and integrate relevant functionalities into your biospecimen management system. PMID:24955734
Standard preanalytical coding for biospecimens: review and implementation of the Sample PREanalytical Code (SPREC). PMID:24849886
Clinical biospecimens: reference materials, certified for nominal properties? PMID:24749878
Moving toward biospecimen harmonization with evidence-based practices. PMID:24749873
Current status, challenges, policies, and bioethics of biobanks. PMID:24465232
Biopsies: next-generation biospecimens for tailoring therapy. PMID:23799370
IT Infrastructure Components for Biobanking. PMID:23616851
Establishment of a biorepository for migraine research: the experience of Interinstitutional Multidisciplinary BioBank (BioBIM). PMID:23354611
The "North German Tumor Bank of Colorectal Cancer": status report after the first 2 years of support by the German Cancer Aid Foundation. PMID:23292500
Identification of evidence-based biospecimen quality-control tools: a report of the International Society for Biological and Environmental Repositories (ISBER) Biospecimen Science Working Group. PMID:23195791
Biobanking past, present and future: responsibilities and benefits. PMID:23135167
Improving international research with clinical specimens: 5 achievable objectives. PMID:22998582
A Pilot Study of the ELFE Longitudinal Cohort: Feasibility and Preliminary Evaluation of Biological Collection. PMID:21977239
Influence of common preanalytical variations on the metabolic profile of serum samples in biobanks. PMID:21964699
Biobank resources for future patient care: developments, principles and concepts. PMID:21923917
Biospecimen Reporting for Improved Study Quality. PMID:21826252
Biobanking and international interoperability: samples. PMID:21761135
Biospecimen reporting for improved study quality (BRISQ). PMID:21574648
International approaches to advancing biospecimen science. PMID:21430299
Usefulness of tissue microarrays for assessment of protein expression, gene copy number and mutational status of EGFR in lung adenocarcinoma. PMID:20803030 -
Standard preanalytical coding for biospecimens: review and implementation of the Sample PREanalytical Code (SPREC)
PubMed citations: 48.
48 articles citing: Standard preanalytical coding for biospecimens: review and implementation of the Sample PREanalytical Code (SPREC)
Extracellular vesicles as a source of prostate cancer biomarkers in liquid biopsies: a decade of research. PMID:34811504
Urinary extracellular vesicles: Assessment of pre-analytical variables and development of a quality control with focus on transcriptomic biomarker research. PMID:34651466
Isolation and characterization of urine microvesicles from prostate cancer patients: different approaches, different visions. PMID:34579682
Urinary extracellular vesicles: A position paper by the Urine Task Force of the International Society for Extracellular Vesicles. PMID:34035881
Dissecting the transcriptome in cardiovascular disease. PMID:33757121
Biobanking in the COVID-19 Era and Beyond: Part 2. A Set of Tool Implementation Case Studies. PMID:33226280
Towards a unified data infrastructure to support European and global microbiome research: a call to action. PMID:33196130
Biobanking for glomerular diseases: a study design and protocol for KOrea Renal biobank NEtwoRk System TOward NExt-generation analysis (KORNERSTONE). PMID:32842999
Biobanks-A Platform for Scientific and Biomedical Research. PMID:32708805
The Barriers and Motivators to Using Human Tissues for Research: The Views of UK-Based Biomedical Researchers. PMID:32551838
Parkinson's disease-associated alterations of the gut microbiome predict disease-relevant changes in metabolic functions. PMID:32517799
Unlocking the Value of White Blood Cells for Heart Failure Diagnosis. PMID:32367341
Towards Harmonized Biobanking for Biomonitoring: A Comparison of Human Biomonitoring-Related and Clinical Biorepositories. PMID:32281895
Impact of different stabilization methods on RT-qPCR results using human lung tissue samples. PMID:32108147
In search of an evidence-based strategy for quality assessment of human tissue samples: report of the tissue Biospecimen Research Working Group of the Spanish Biobank Network. PMID:31718661
Cancer Sample Biobanking at the Next Level: Combining Tissue With Living Cell Repositories to Promote Precision Medicine. PMID:31696117
BioSCOOP - Biobank Sample Communication Protocol. New approach for the transfer of information between biobanks. PMID:31609452
Mass Spectrometry-Based Plasma Proteomics: Considerations from Sample Collection to Achieving Translational Data. PMID:31573204
Rationalized Development of a Campus-Wide Cell Line Dataset for Implementation in the Biobank LIMS System at Bioresource Center Ghent. PMID:31294023
Biobanking in health care: evolution and future directions. PMID:31118074
Linking pre-existing biorepositories for medical research: the PopGen 2.0 Network. PMID:30927239
Meta-omics data and collection objects (MOD-CO): a conceptual schema and data model for processing sample data in meta-omics research. PMID:30715273
Cold Ischemia Score: An mRNA Assay for the Detection of Extended Cold Ischemia in Formalin-Fixed, Paraffin-Embedded Tissue. PMID:30562131
The Luxembourg Parkinson's Study: A Comprehensive Approach for Stratification and Early Diagnosis. PMID:30420802
Usage Data and Scientific Impact of the Prospectively Established Fluid Bioresources at the Hospital-Based MedUni Wien Biobank. PMID:30335475
Small Nucleolar RNA Score: An Assay to Detect Formalin-Overfixed Tissue. PMID:30234371
Biobanks in the Era of Digital Medicine. PMID:29285753
Understanding preanalytical variables and their effects on clinical biomarkers of oncology and immunotherapy. PMID:29258857
Impact of Specimen Heterogeneity on Biomarkers in Repository Samples from Patients with Acute Myeloid Leukemia: A SWOG Report. PMID:29172682
The Human Plasma Proteome Draft of 2017: Building on the Human Plasma PeptideAtlas from Mass Spectrometry and Complementary Assays. PMID:28938075
A critical analysis of cancer biobank practices in relation to biospecimen quality. PMID:28510101
Establishment of a cohort for deep phenotyping of the immune response to influenza vaccination among elderly individuals recruited from the general population. PMID:28394705
Quality Matters: 2016 Annual Conference of the National Infrastructures for Biobanking. PMID:27992240
The Global Genome Biodiversity Network (GGBN) Data Standard specification. PMID:27694206
A biobank to support HIV malignancy research for sub-Saharan Africa. PMID:27601106
Assays for Qualification and Quality Stratification of Clinical Biospecimens Used in Research: A Technical Report from the ISBER Biospecimen Science Working Group. PMID:27046294
"Life in Data"--Outcome of a Multi-Disciplinary, Interactive Biobanking Conference Session on Sample Data. PMID:26808538
The Informatics Challenges Facing Biobanks: A Perspective from a United Kingdom Biobanking Network. PMID:26418270
Challenges for quality management in implementation, maintenance, and sustainability of research tissue biobanks. PMID:26271995
Biobanking in genomic medicine. PMID:26030251
How to design biospecimen identifiers and integrate relevant functionalities into your biospecimen management system. PMID:24955734
A data standard for sourcing fit-for-purpose biological samples in an integrated virtual network of biobanks. PMID:24785371
DNA fingerprinting: a quality control case study for human biospecimen authentication. PMID:24749883
Clinical biospecimens: reference materials, certified for nominal properties? PMID:24749878
Long-term storage of endocrine tissues at - 80°C does not adversely affect RNA quality or overall histomorphology. PMID:24475321
Developing a semantically rich ontology for the biobank-administration domain. PMID:24103726
A call to standardize preanalytic data elements for biospecimens. PMID:23937609
Biobanking past, present and future: responsibilities and benefits. PMID:23135167
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biobank
metasource: Fairsharing.org
version: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
biological sample
metasource: Fairsharing.org
version: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
biological sample annotation
metasource: Fairsharing.org
version: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
quality control
metasource: Fairsharing.org
version: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
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biobank
metasource: Fairsharing.orgversion: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
biological sample
metasource: Fairsharing.orgversion: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
biological sample annotation
metasource: Fairsharing.orgversion: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
quality control
metasource: Fairsharing.orgversion: FAIRsharing.org: SPREC; Standard Preanalytical Code; DOI: https://doi.org/10.25504/FAIRsharing.e01rsf; Last edited: Jan. 8, 2019, 1:31 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
biobank biological sample biological sample annotation quality control
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