BIM

Description

More detailed information about this field from each metasource.

Extended variant information file accompanying a .bed binary genotype table.

metasource: Fairsharing.org
version: None

FAM

A sample information file accompanying a .bed binary genotype table.

PED

Original standard text format for sample pedigree information and genotype calls.

MAP

Variant information file accompanying a .ped text pedigree + genotype table.

Biomedical Image Ontology

Biomedical images published within the scientific literature play a central role in reporting and facilitating life science discoveries. Existing ontologies and vocabularies describing biomedical imag ...

Variant Call Format

Variant Call Format (VCF) is a text file format (most likely stored in a compressed manner). It contains meta-information lines, a header line, and then data lines each containing information about a ...

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - England

COVID-19 COG-UK Viral Genome (variant strain data)

ClinGen Variant Curation Interface

ClinGen Variant Curation Interface is a variant classification platform for the application of evidence criteria from ACMG/AMP guidelines.

VannoPortal

VannoPortal is a variant annotation database that comprehensively collects and integrates genome-wide variant annotations and prediction scores from various biological domains, including allele freque ...

Connectivity Table file format

A CT (Connectivity Table) file contains secondary structure information for a RNA sequence.

Bibliome Variant Database

The Bibliome Variant Database is a collection of variants mined from open-access primary literature. All variants included in the database have been mapped to the human genome and are presented in a m ...

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - Scotland

Summary of SARS-CoV-2 lineages and mutations

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - NI

Summary of SARS-CoV-2 lineages and mutations

Allele frequency resource for research and teaching

ALFRED is designed to make allele frequency data on human population samples readily available for use by the scientific and educational communities.

ICM binary file Format

ICM binary file Format is used in databases pertaining to structural biology and protein families. This format can be used for the graphical representation of RNA, DNA, and proteins interactions.

Variant Effect Predictor data format

A text format devised by Ensembl for the eponymous Variant Effect Predictor tool.

Binary Probe Map Format

The BPMAP file contains information relating to the design of the Affymetrix tiling arrays. The format of the BPMAP file is a binary file with data stored in big-endian format.

macromolecular Crystallographic Information File

PDBx/mmCIF is a dictionary of data archiving macromolecule crystallographic experiments and their results.

COG-UK Viral Genome Sequences

COG-UK Consortium has published a dataset which contains over 20K SARS-CoV-2 viral genome sequences available as open access.

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - Wales

The dataset provides information about SARS-CoV-2 variants of concern and variants under investigation in Wales. This includes phylogenetic and mutational information about samples.

MaveDB

An open-source platform to distribute and interpret data from multiplexed assays of variant effect. Table of Multiplexed Assay of Variant Effect (MAVE) studies. MaveDB - A repository for MAVE assay ...

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Tags
More detailed information about this field from each metasource.

allele
metasource: Fairsharing.org
version: None

chromosome
metasource: Fairsharing.org
version: None

sequence variant
metasource: Fairsharing.org
version: None

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FAM

PED

MAP

Biomedical Image Ontology

Variant Call Format

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - England

ClinGen Variant Curation Interface

VannoPortal

Connectivity Table file format

Bibliome Variant Database

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - Scotland

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - NI

Allele frequency resource for research and teaching

ICM binary file Format

Variant Effect Predictor data format

Binary Probe Map Format

macromolecular Crystallographic Information File

COG-UK Viral Genome Sequences

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - Wales

MaveDB

BIM

Webpage:

Tags: Tags More detailed information about this field from each metasource. × allele metasource: Fairsharing.org version: None chromosome metasource: Fairsharing.org version: None sequence variant metasource: Fairsharing.org version: None Close

More to explore:

1/20

FAM

PED

MAP

Biomedical Image Ontology

Variant Call Format

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - England

ClinGen Variant Curation Interface

VannoPortal

Connectivity Table file format

Bibliome Variant Database

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - Scotland

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - NI

Allele frequency resource for research and teaching

ICM binary file Format

Variant Effect Predictor data format

Binary Probe Map Format

macromolecular Crystallographic Information File

COG-UK Viral Genome Sequences

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - Wales

MaveDB

Tags:

Tags
More detailed information about this field from each metasource.

allele
metasource: Fairsharing.org
version: None

chromosome
metasource: Fairsharing.org
version: None

sequence variant
metasource: Fairsharing.org
version: None