Protein Ensemble Database
The Protein Ensemble Database (PED) is an open access database for the deposition of structural ensembles including intrinsically disordered proteins
Description
More detailed information about this field from each metasource.
The Protein Ensemble Database (PED) is an open access database for the deposition of structural ensembles including intrinsically disordered proteins
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:17.118832
Webpage:
https://proteinensemble.org/Webpage
More detailed information about this field from each metasource.
https://proteinensemble.org/
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:17.118832
Licence:
Name: CC-BY-4.0Licence name
More detailed information about this field from each metasource.
Publications:
Publications
More detailed information about this field from each metasource.
PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins
PMID: 33305318
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:17.118832
Publications
More detailed information about this field from each metasource.
PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins
PMID: 33305318
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:17.118832
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PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins
PubMed citations: 15.
15 articles citing: PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins
Databases for intrinsically disordered proteins. PMID:35102880
Experimental Evidence of Intrinsic Disorder and Amyloid Formation by the Henipavirus W Proteins. PMID:35055108
ECO: the Evidence and Conclusion Ontology, an update for 2022. PMID:34986598
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation. PMID:34850135
FuzDB: a new phase in understanding fuzzy interactions. PMID:34791357
When Order Meets Disorder: Modeling and Function of the Protein Interface in Fuzzy Complexes. PMID:34680162
DIPEND: An Open-Source Pipeline to Generate Ensembles of Disordered Segments Using Neighbor-Dependent Backbone Preferences. PMID:34680137
Conformational landscape of multidomain SMAD proteins. PMID:34630939
Interpretable artificial intelligence and exascale molecular dynamics simulations to reveal kinetics: Applications to Alzheimer's disease. PMID:34628220
Identification of a Region in the Common Amino-terminal Domain of Hendra Virus P, V, and W Proteins Responsible for Phase Transition and Amyloid Formation. PMID:34572537
Extended disorder at the cell surface: The conformational landscape of the ectodomains of syndecans. PMID:34505054
The diversity of molecular interactions involving intrinsically disordered proteins: A molecular modeling perspective. PMID:34285781
Mol* Viewer: modern web app for 3D visualization and analysis of large biomolecular structures. PMID:33956157
Can sequence-specific and dynamics-based metrics allow us to decipher the function in IDP sequences? PMID:33951452
The 2021 Nucleic Acids Research database issue and the online molecular biology database collection. PMID:33396976
Tags:
protein structure analysis protein disordered structure
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