MIAPE: Mass Spectrometry Informatics
Names
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MIAPE: Mass Spectrometry Informatics
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
MIAPE-MSI
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Names
More detailed information about this field from each metasource.
MIAPE: Mass Spectrometry Informatics
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
MIAPE-MSI
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Names
More detailed information about this field from each metasource.
MIAPE: Mass Spectrometry Informatics
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
MIAPE-MSI
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
This module identifies the minimum information required to report the use of protein and peptide identification and characterisation software to analyse the data produced by mass spectrometry experiments, sufficient to support both the effective interpretation and assessment of the data and the potential recreation of the work that generated it.
Description
More detailed information about this field from each metasource.
This module identifies the minimum information required to report the use of protein and peptide identification and characterisation software to analyse the data produced by mass spectrometry experiments, sufficient to support both the effective interpretation and assessment of the data and the potential recreation of the work that generated it.
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Webpage:
http://www.psidev.info/groups/miapeWebpage
More detailed information about this field from each metasource.
http://www.psidev.info/groups/miape
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
Guidelines for reporting the use of mass spectrometry informatics in proteomics
PMID: 18688233
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Publications
More detailed information about this field from each metasource.
Guidelines for reporting the use of mass spectrometry informatics in proteomics
PMID: 18688233
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
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Guidelines for reporting the use of mass spectrometry informatics in proteomics
PubMed citations: 27.
27 articles citing: Guidelines for reporting the use of mass spectrometry informatics in proteomics
Methods for Proteomic Analyses of Mycobacteria. PMID:34235669
Best practice in reporting corona studies: Minimum information about Nanomaterial Biocorona Experiments (MINBE). PMID:32774443
Global phosphoproteomic analysis of Ebola virions reveals a novel role for VP35 phosphorylation-dependent regulation of genome transcription. PMID:31562565
Minimal Information About an Immuno-Peptidomics Experiment (MIAIPE). PMID:29791771
The Human Eye Proteome Project: Updates on an Emerging Proteome. PMID:29356342
Proteomics Standards Initiative: Fifteen Years of Progress and Future Work. PMID:28849660
The mzqLibrary--An open source Java library supporting the HUPO-PSI quantitative proteomics standard. PMID:26037908
AMP-Activated Protein Kinase Regulates the Cell Surface Proteome and Integrin Membrane Traffic. PMID:26010094
Development of data representation standards by the human proteome organization proteomics standards initiative. PMID:25726569
Antimicrobial targets localize to the extracellular vesicle-associated proteome of Pseudomonas aeruginosa grown in a biofilm. PMID:25232353
A temporal examination of the planktonic and biofilm proteome of whole cell Pseudomonas aeruginosa PAO1 using quantitative mass spectrometry. PMID:24532839
Proteomics quality and standard: from a regulatory perspective. PMID:24316359
Salinity-induced regulation of the myo-inositol biosynthesis pathway in tilapia gill epithelium. PMID:24072791
Tools (Viewer, Library and Validator) that facilitate use of the peptide and protein identification standard format, termed mzIdentML. PMID:23813117
Djeen (Database for Joomla!'s Extensible Engine): a research information management system for flexible multi-technology project administration. PMID:23742665
A tutorial for software development in quantitative proteomics using PSI standard formats. PMID:23584085
Protein analysis by shotgun/bottom-up proteomics. PMID:23438204
Controlled vocabularies and ontologies in proteomics: overview, principles and practice. PMID:23429179
Deciphering the molecular nature of ovarian cancer biomarker CA125. PMID:22949880
The mzIdentML data standard for mass spectrometry-based proteomics results. PMID:22375074
The ProteoRed MIAPE web toolkit: a user-friendly framework to connect and share proteomics standards. PMID:21983993
A DIGE study on the effects of salbutamol on the rat muscle proteome - an exemplar of best practice for data sharing in proteomics. PMID:21443781
The gel electrophoresis markup language (GelML) from the Proteomics Standards Initiative. PMID:20677327
Guidelines for reporting the use of gel image informatics in proteomics. PMID:20622830
Guidelines for reporting the use of column chromatography in proteomics. PMID:20622829
Guidelines for reporting the use of capillary electrophoresis in proteomics. PMID:20622828
Target-decoy search strategy for mass spectrometry-based proteomics. PMID:20013364
Tags:
Tags
More detailed information about this field from each metasource.
assay
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
mass spectrometry spectra
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
protein
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Tags
More detailed information about this field from each metasource.
assay
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
mass spectrometry spectra
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
protein
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE-MSI; MIAPE: Mass Spectrometry Informatics; DOI: https://doi.org/10.25504/FAIRsharing.mrrzb3; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
assay mass spectrometry spectra protein
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