Minimum Information About a Proteomics Experiment
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Minimum Information About a Proteomics Experiment
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
MIAPE
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Names
More detailed information about this field from each metasource.
Minimum Information About a Proteomics Experiment
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
MIAPE
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Names
More detailed information about this field from each metasource.
Minimum Information About a Proteomics Experiment
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
MIAPE
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
MIAPE attempts to define the minimum set of information about whole proteomics experiments that would be required by a public repository.
Description
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MIAPE attempts to define the minimum set of information about whole proteomics experiments that would be required by a public repository.
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Webpage:
http://www.psidev.info/miapeWebpage
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http://www.psidev.info/miape
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Publications:
Publications
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The minimum information about a proteomics experiment (MIAPE)
PMID: 17687369
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Publications
More detailed information about this field from each metasource.
The minimum information about a proteomics experiment (MIAPE)
PMID: 17687369
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
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The minimum information about a proteomics experiment (MIAPE)
PubMed citations: 225.
225 articles citing: The minimum information about a proteomics experiment (MIAPE)
Subtyping of common complex diseases and disorders by integrating heterogeneous data. Identifying clusters among women with lower urinary tract symptoms in the LURN study. PMID:35687541
The State of Data in Healthcare: Path Towards Standardization. PMID:35415409
5-Aminolevulinic Acid and 24-Epibrassinolide Improve the Drought Stress Resilience and Productivity of Banana Plants. PMID:35336624
Platelet-released extracellular vesicles: the effects of thrombin activation. PMID:35288766
Comparative proteomics profiling revealed the involvement of GRB2-ROCK2 axis in Lyme neuroborreliosis caused by Borrelia Burgdorferi. PMID:35212166
Democratizing data-independent acquisition proteomics analysis on public cloud infrastructures via the Galaxy framework. PMID:35166338
Recombinant expression of insoluble enzymes in Escherichia coli: a systematic review of experimental design and its manufacturing implications. PMID:34717620
Simple workflow to repurpose SARS-CoV-2 swab/serum samples for the isolation of cost-effective antibody/antigens for proteotyping applications and diagnosis. PMID:34622322
Subcellular proteomics. PMID:34549195
The Hitchhiker's guide to glycoproteomics. PMID:34282822
Methods for Proteomic Analyses of Mycobacteria. PMID:34235669
Quality standards in proteomics research facilities: Common standards and quality procedures are essential for proteomics facilities and their users. PMID:34009726
An Arabidopsis lipid map reveals differences between tissues and dynamic changes throughout development. PMID:33866624
A Second Look at FAIR in Proteomic Investigations. PMID:33719446
Method comparison studies of telomere length measurement using qPCR approaches: A critical appraisal of the literature. PMID:33471860
Drivers of and Obstacles to the Adoption of Toxicogenomics for Chemical Risk Assessment: Insights from Social Science Perspectives. PMID:33112659
A high-stringency blueprint of the human proteome. PMID:33067450
Best Practices for Making Reproducible Biochemical Models. PMID:32853539
Best practice in reporting corona studies: Minimum information about Nanomaterial Biocorona Experiments (MINBE). PMID:32774443
Metabolomics and Multi-Omics Integration: A Survey of Computational Methods and Resources. PMID:32429287
Community standards for open cell migration data. PMID:32396199
Reporting Guidelines to Increase the Reproducibility and Comparability of Research on Microplastics. PMID:32394727
Ten simple rules for providing effective bioinformatics research support. PMID:32214318
Accessible and reproducible mass spectrometry imaging data analysis in Galaxy. PMID:31816088
Glycan size and attachment site location affect electron transfer dissociation (ETD) fragmentation and automated glycopeptide identification. PMID:31637569
Rational Design and Methods of Analysis for the Study of Short- and Long-Term Dynamic Responses of Eukaryotic Systems. PMID:31602619
Data Management in Computational Systems Biology: Exploring Standards, Tools, Databases, and Packaging Best Practices. PMID:31602618
Biomarkers of Acute Lung Injury The Individualized Approach: for Phenotyping, Risk Stratification and Treatment Surveillance. PMID:31382587
Towards a standardized bioinformatics infrastructure for N- and O-glycomics. PMID:31332201
MARMoSET - Extracting Publication-ready Mass Spectrometry Metadata from RAW Files. PMID:31097673
First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study. PMID:31045356
MIReAD, a minimum information standard for reporting arthropod abundance data. PMID:31024009
A Tool to Encourage Minimum Reporting Guideline Uptake for Data Analysis in Metabolomics. PMID:30841575
Critical review of reporting of the data analysis step in metabolomics. PMID:30830321
Recommendations for reporting ion mobility Mass Spectrometry measurements. PMID:30707468
Identification of Cytauxzoon felis antigens via protein microarray and assessment of expression library immunization against cytauxzoonosis. PMID:30618510
Paraquat-Mediated Oxidative Stress in Anopheles gambiae Mosquitoes Is Regulated by An Endoplasmic Reticulum (ER) Stress Response. PMID:30424486
Updates of the In-Gel Digestion Method for Protein Analysis by Mass Spectrometry. PMID:30259661
Plasmodium Parasites Viewed through Proteomics. PMID:30146456
Balancing sufficiency and impact in reporting standards for mass spectrometry imaging experiments. PMID:30124809
MS-based lipidomics of human blood plasma: a community-initiated position paper to develop accepted guidelines. PMID:30115755
Mass spectrometry quantitation of proteins from small pools of developing auditory and vestibular cells. PMID:30015805
FindSim: A Framework for Integrating Neuronal Data and Signaling Models. PMID:29997492
Public proteomics data: How the field has evolved from sceptical inquiry to the promise of in silico proteomics. PMID:29900110
Minimal Information About an Immuno-Peptidomics Experiment (MIAIPE). PMID:29791771
Integrated Chemometrics and Statistics to Drive Successful Proteomics Biomarker Discovery. PMID:29701723
Rational cell culture optimization enhances experimental reproducibility in cancer cells. PMID:29445172
QCloud: A cloud-based quality control system for mass spectrometry-based proteomics laboratories. PMID:29324744
Correlating Resolving Power, Resolution, and Collision Cross Section: Unifying Cross-Platform Assessment of Separation Efficiency in Ion Mobility Spectrometry. PMID:29039942
Big data management challenges in health research-a literature review. PMID:28968677
Compliance with minimum information guidelines in public metabolomics repositories. PMID:28949328
GlyTouCan: an accessible glycan structure repository. PMID:28922742
Is systems pharmacology ready to impact upon therapy development? A study on the cholesterol biosynthesis pathway. PMID:28910500
Heterodimeric capping protein is required for stereocilia length and width regulation. PMID:28899994
Proteomics Standards Initiative: Fifteen Years of Progress and Future Work. PMID:28849660
E-Science technologies in a workflow for personalized medicine using cancer screening as a case study. PMID:28444384
A Comprehensive Guide for Performing Sample Preparation and Top-Down Protein Analysis. PMID:28387712
Use of a Targeted Urine Proteome Assay (TUPA) to identify protein biomarkers of delayed recovery after kidney transplant. PMID:28261998
GB3.0: a platform for plant bio-design that connects functional DNA elements with associated biological data. PMID:28053117
Towards an open grapevine information system. PMID:27917288
It is all about the solvent: on the importance of the mobile phase for ZIC-HILIC glycopeptide enrichment. PMID:27909778
Measures for interoperability of phenotypic data: minimum information requirements and formatting. PMID:27843484
A proteomic adaptation of small intestinal mucosa in response to dietary protein limitation. PMID:27841298
The minimum information required for a glycomics experiment (MIRAGE) project: sample preparation guidelines for reliable reporting of glycomics datasets. PMID:27654115
Editorial: International Plant Proteomics Organization (INPPO) World Congress 2014. PMID:27547211
PDZD7-MYO7A complex identified in enriched stereocilia membranes. PMID:27525485
Comparison of pre-processing methods for multiplex bead-based immunoassays. PMID:27515389
Methods for Optimizing CRISPR-Cas9 Genome Editing Specificity. PMID:27494557
Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 2.1. PMID:27490519
BioSharing: curated and crowd-sourced metadata standards, databases and data policies in the life sciences. PMID:27189610
Glycomics & Glycoproteomics in Glycoconjugate journal. PMID:27178342
The UniProtKB guide to the human proteome. PMID:26896845
Cross Reactive Material 197 glycoconjugate vaccines contain privileged conjugation sites. PMID:26841683
Algorithms and design strategies towards automated glycoproteomics analysis. PMID:26728195
Biomarker discovery in mass spectrometry-based urinary proteomics. PMID:26703953
Hair-bundle proteomes of avian and mammalian inner-ear utricles. PMID:26645194
Exploring the potential of public proteomics data. PMID:26449181
The proteome of mouse vestibular hair bundles over development. PMID:26401315
Development of a Targeted Urine Proteome Assay for kidney diseases. PMID:26220717
Detailed characterization of the O-linked glycosylation of the neuropilin-1 c/MAM-domain. PMID:26059692
The mzqLibrary--An open source Java library supporting the HUPO-PSI quantitative proteomics standard. PMID:26037908
AMP-Activated Protein Kinase Regulates the Cell Surface Proteome and Integrin Membrane Traffic. PMID:26010094
BioMiner: Paving the Way for Personalized Medicine. PMID:26005322
G Protein-Coupled Receptor (GPCR) Expression in Native Cells: "Novel" endoGPCRs as Physiologic Regulators and Therapeutic Targets. PMID:25737495
YPED: an integrated bioinformatics suite and database for mass spectrometry-based proteomics research. PMID:25712262
Quality assessment and optimization of purified protein samples: why and how? PMID:25547134
Fingerprints of a message: integrating positional information on the transcriptome. PMID:25364746
Reverse phase protein arrays: mapping the path towards personalized medicine. PMID:25358623
Identifying novel biomarkers through data mining-a realistic scenario? PMID:25347964
Toward effective sharing of high-dimensional immunology data. PMID:25101748
A standardized framing for reporting protein identifications in mzIdentML 1.2. PMID:25092112
The quality of methods reporting in parasitology experiments. PMID:25076044
Sex-partitioning of the Plasmodium falciparum stage V gametocyte proteome provides insight into falciparum-specific cell biology. PMID:25056935
STATegra EMS: an Experiment Management System for complex next-generation omics experiments. PMID:25033091
The mzTab data exchange format: communicating mass-spectrometry-based proteomics and metabolomics experimental results to a wider audience. PMID:24980485
Relation of completeness of reporting of health research to journals' endorsement of reporting guidelines: systematic review. PMID:24965222
Genome scale modeling in systems biology: algorithms and resources. PMID:24822031
MIRAGE: the minimum information required for a glycomics experiment. PMID:24653214
Shotgun MS proteomic analysis of bronchoalveolar lavage fluid in normal subjects. PMID:24616423
The Risa R/Bioconductor package: integrative data analysis from experimental metadata and back again. PMID:24564732
Guidelines for managing data and processes in bone and cartilage tissue engineering. PMID:24564199
Minimum information about a biofilm experiment (MIABiE): standards for reporting experiments and data on sessile microbial communities living at interfaces. PMID:24478124
Toward more transparent and reproducible omics studies through a common metadata checklist and data publications. PMID:24456465
Systems toxicology: from basic research to risk assessment. PMID:24446777
Proteomics quality and standard: from a regulatory perspective. PMID:24316359
Proteomic landscape of bronchoalveolar lavage fluid in human immunodeficiency virus infection. PMID:24213920
Expression of the mevalonate pathway enzymes in the Lutzomyia longipalpis (Diptera: Psychodidae) sex pheromone gland demonstrated by an integrated proteomic approach. PMID:24185139
Cellular growth and mitochondrial ultrastructure of leishmania (Viannia) braziliensis promastigotes are affected by the iron chelator 2,2-dipyridyl. PMID:24147167
Salinity-induced regulation of the myo-inositol biosynthesis pathway in tilapia gill epithelium. PMID:24072791
Protein expression profile of rat type two alveolar epithelial cells during hyperoxic stress and recovery. PMID:24014686
Integration of cardiac proteome biology and medicine by a specialized knowledgebase. PMID:23965338
Tools (Viewer, Library and Validator) that facilitate use of the peptide and protein identification standard format, termed mzIdentML. PMID:23813117
The mzQuantML data standard for mass spectrometry-based quantitative studies in proteomics. PMID:23599424
A tutorial for software development in quantitative proteomics using PSI standard formats. PMID:23584085
IBC's 23rd Annual Antibody Engineering, 10th Annual Antibody Therapeutics international conferences and the 2012 Annual Meeting of The Antibody Society: December 3-6, 2012, San Diego, CA. PMID:23575266
Proteomics and the analysis of proteomic data: 2013 overview of current protein-profiling technologies. PMID:23504934
The HUPO proteomics standards initiative- mass spectrometry controlled vocabulary. PMID:23482073
Phenotyping bananas for drought resistance. PMID:23443573
The conserved set of host proteins incorporated into HIV-1 virions suggests a common egress pathway in multiple cell types. PMID:23432411
Controlled vocabularies and ontologies in proteomics: overview, principles and practice. PMID:23429179
The minimum information required for a glycomics experiment (MIRAGE) project: improving the standards for reporting mass-spectrometry-based glycoanalytic data. PMID:23378518
Interlaboratory studies and initiatives developing standards for proteomics. PMID:23319436
Overview of DNA microarrays: types, applications, and their future. PMID:23288464
A semantic proteomics dashboard (SemPoD) for data management in translational research. PMID:23282161
UniProtKB amid the turmoil of plant proteomics research. PMID:23230445
Genomics and proteomics: Applications in autoimmune diseases. PMID:23226033
The proteomics big challenge for biomarkers and new drug-targets discovery. PMID:23203042
Deciphering the molecular nature of ovarian cancer biomarker CA125. PMID:22949880
Using ProHits to store, annotate, and analyze affinity purification-mass spectrometry (AP-MS) data. PMID:22948730
Analyzing protein-protein interactions from affinity purification-mass spectrometry data with SAINT. PMID:22948729
Minireview: progress and challenges in proteomics data management, sharing, and integration. PMID:22902541
Constitutive and inflammatory immunopeptidome of pancreatic β-cells. PMID:22872234
Application of proteomics to soft tissue sarcomas. PMID:22778956
BiofOmics: a Web platform for the systematic and standardized collection of high-throughput biofilm data. PMID:22768184
MuteinDB: the mutein database linking substrates, products and enzymatic reactions directly with genetic variants of enzymes. PMID:22730453
Characterization of bacteria in ballast water using MALDI-TOF mass spectrometry. PMID:22685576
Behavioral barcoding in the cloud: embracing data-intensive digital phenotyping in neuropharmacology. PMID:22652049
DIPSBC--data integration platform for systems biology collaborations. PMID:22568834
PRIDE: quality control in a proteomics data repository. PMID:22434838
The mzIdentML data standard for mass spectrometry-based proteomics results. PMID:22375074
PRODIS: a proteomics data management system with support to experiment tracking. PMID:22369043
Cancer biomarkers. PMID:22356776
Recombinant protein quality evaluation: proposal for a minimal information standard. PMID:22180821
TraML--a standard format for exchange of selected reaction monitoring transition lists. PMID:22159873
Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles). PMID:22053864
Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles). PMID:22052993
Software for systems biology: from tools to integrated platforms. PMID:22048662
Enabling BioSharing - a report on the Annual Spring Workshop of the HUPO-PSI April 11-13, 2011, EMBL-Heidelberg, Germany. PMID:22045680
Enhanced athletic performance on multisite AAV-IGF1 gene transfer coincides with massive modification of the muscle proteome. PMID:22017471
The ProteoRed MIAPE web toolkit: a user-friendly framework to connect and share proteomics standards. PMID:21983993
A formal mathematical framework for physiological observations, experiments and analyses. PMID:21976637
A systematic analysis of eluted fraction of plasma post immunoaffinity depletion: implications in biomarker discovery. PMID:21931718
Moving towards high density clinical signature studies with a human proteome catalogue developing multiplexing mass spectrometry assay panels. PMID:21884626
Approaches for the study of cancer: towards the integration of genomics, proteomics and metabolomics. PMID:21865133
A Metadata description of the data in "A metabolomic comparison of urinary changes in type 2 diabetes in mouse, rat, and human.". PMID:21801423
The proteome of mouse brain microvessel membranes and basal lamina. PMID:21792245
Comparison of Programmatic Approaches for Efficient Accessing to mzML Files. PMID:21766049
Minimum Information about a Cardiac Electrophysiology Experiment (MICEE): standardised reporting for model reproducibility, interoperability, and data sharing. PMID:21745496
The hippocampal neuroproteome with aging and cognitive decline: past progress and future directions. PMID:21647399
IsoformResolver: A peptide-centric algorithm for protein inference. PMID:21599010
A DIGE study on the effects of salbutamol on the rat muscle proteome - an exemplar of best practice for data sharing in proteomics. PMID:21443781
Data standards for Omics data: the basis of data sharing and reuse. PMID:21370078
Mass spectrometry-based immuno-precipitation proteomics - the user's guide. PMID:21365760
Towards interoperable reporting standards for omics data: hopes and hurdles. PMID:21347181
Integrated multilaboratory systems biology reveals differences in protein metabolism between two reference yeast strains. PMID:21266995
Multi-modal proteomic analysis of retinal protein expression alterations in a rat model of diabetic retinopathy. PMID:21249158
Serum biomarkers for improved diagnostic of pancreatic cancer: a current overview. PMID:21193998
RAId_aPS: MS/MS analysis with multiple scoring functions and spectrum-specific statistics. PMID:21103371
ProHits: integrated software for mass spectrometry-based interaction proteomics. PMID:20944583
In silico models of cancer. PMID:20836040
Structured digital tables on the Semantic Web: toward a structured digital literature. PMID:20739925
mzML--a community standard for mass spectrometry data. PMID:20716697
SMN deficiency disrupts brain development in a mouse model of severe spinal muscular atrophy. PMID:20705736
Proteomic characterization of an isolated fraction of synthetic proteasome inhibitor (PSI)-induced inclusions in PC12 cells might offer clues to aggresomes as a cellular defensive response against proteasome inhibition by PSI. PMID:20704702
The gel electrophoresis markup language (GelML) from the Proteomics Standards Initiative. PMID:20677327
Identification of the feline humoral immune response to Bartonella henselae infection by protein microarray. PMID:20625509
Guidelines for reporting the use of gel image informatics in proteomics. PMID:20622830
Guidelines for reporting the use of column chromatography in proteomics. PMID:20622829
Guidelines for reporting the use of capillary electrophoresis in proteomics. PMID:20622828
Naturally occurring human urinary peptides for use in diagnosis of chronic kidney disease. PMID:20616184
Proteomics of plant pathogenic fungi. PMID:20589070
BioTorrents: a file sharing service for scientific data. PMID:20418944
Toxicogenomic profiling of chemically exposed humans in risk assessment. PMID:20382258
Protein Bioinformatics Infrastructure for the Integration and Analysis of Multiple High-Throughput "omics" Data. PMID:20369061
Probing native protein structures by chemical cross-linking, mass spectrometry, and bioinformatics. PMID:20360032
ProteomeCommons.org collaborative annotation and project management resource integrated with the Tranche repository. PMID:20356086
Zsyntax: a formal language for molecular biology with projected applications in text mining and biological prediction. PMID:20209084
Semantic Web for data harmonization in Chinese medicine. PMID:20205772
Probing the reproducibility of leaf growth and molecular phenotypes: a comparison of three Arabidopsis accessions cultivated in ten laboratories. PMID:20200072
Persistent proteomic alterations in the medial prefrontal cortex with abstinence from cocaine self-administration. PMID:20161123
Toxin induction and protein extraction from Fusarium spp. cultures for proteomic studies. PMID:20160676
Identification of phosphorylation sites within the signaling adaptor APPL1 by mass spectrometry. PMID:20095645
CORNET: a user-friendly tool for data mining and integration. PMID:20053712
Sources of bias in specimens for research about molecular markers for cancer. PMID:20038718
The 2010 Nucleic Acids Research Database Issue and online Database Collection: a community of data resources. PMID:19965766
iLAP: a workflow-driven software for experimental protocol development, data acquisition and analysis. PMID:19941647
The use of neuroproteomics in drug abuse research. PMID:19926406
PeptideDepot: flexible relational database for visual analysis of quantitative proteomic data and integration of existing protein information. PMID:19834895
Systems integration of biodefense omics data for analysis of pathogen-host interactions and identification of potential targets. PMID:19779614
Discovery and validation of urinary biomarkers for prostate cancer. PMID:19759844
Applying proteomics to the diagnosis and treatment of ALS and related diseases. PMID:19670321
A guide to the Proteomics Identifications Database proteomics data repository. PMID:19662629
Information management for high content live cell imaging. PMID:19622144
The platelet proteome. PMID:19550320
Generating 'omic knowledge': the role of informatics in high content screening. PMID:19531005
MIMAS 3.0 is a Multiomics Information Management and Annotation System. PMID:19450266
Web-queryable large-scale data sets for hypothesis generation in plant biology. PMID:19401381
Mostly, your results matter to others. PMID:19174831
Cognitive performance and age-related changes in the hippocampal proteome. PMID:19135133
Evaluation of urinary biomarkers for coronary artery disease, diabetes, and diabetic kidney disease. PMID:19132849
Beyond fishing: the role of discovery proteomics in mechanistic lung research. PMID:19011049
Big data: The future of biocuration. PMID:18769432
Translational bioinformatics: coming of age. PMID:18755990
Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project. PMID:18688244
Minimal information: an urgent need to assess the functional reliability of recombinant proteins used in biological experiments. PMID:18647423
Short time-series microarray analysis: methods and challenges. PMID:18605994
2DB: a Proteomics database for storage, analysis, presentation, and retrieval of information from mass spectrometric experiments. PMID:18605993
QCAL--a novel standard for assessing instrument conditions for proteome analysis. PMID:18599307
The EXACT description of biomedical protocols. PMID:18586727
Sperm chromatin: fertile grounds for proteomic discovery of clinical tools. PMID:18504257
Making a new technology work: the standardization and regulation of microarrays. PMID:18449388
Urinary proteomics in diabetes and CKD. PMID:18448586
HIP2: an online database of human plasma proteins from healthy individuals. PMID:18439290
Bioinformatics and cancer research: building bridges for translational research. PMID:18258507
An open-source representation for 2-DE-centric proteomics and support infrastructure for data storage and analysis. PMID:18179696
Tags:
Tags
More detailed information about this field from each metasource.
assay
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
experimental measurement
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
experimentally determined
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
pathogen
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
protein
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
protocol
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
study design
metasource: Fairsharing.org
version: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Tags
More detailed information about this field from each metasource.
assay
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
experimental measurement
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
experimentally determined
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
pathogen
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
protein
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
protocol
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
study design
metasource: Fairsharing.orgversion: FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
assay experimental measurement experimentally determined pathogen protein protocol study design
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