FAIRsharing.hg2xzw; Last edited: Jan. 8, 2019, 1:13 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:45.497298

gabi-kat
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:45.497298

Other names: GABI-Kat, gabi-kat

T-DNA insertions in Arabidopsis and their flanking sequence tags.

Webpage:

Publications: (7)

Publications
More detailed information about this field from each metasource.

An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics
PMID: 14756321
metasource: Fairsharing.org
version: FAIRsharing.org: GABI-Kat; GABI-Kat SimpleSearch; DOI: https://doi.org/10.25504/FAIRsharing.hg2xzw; Last edited: Jan. 8, 2019, 1:13 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database
PMID: 22080561
metasource: Fairsharing.org
version: FAIRsharing.org: GABI-Kat; GABI-Kat SimpleSearch; DOI: https://doi.org/10.25504/FAIRsharing.hg2xzw; Last edited: Jan. 8, 2019, 1:13 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:45.497298

GABI-Kat SimpleSearch: an Arabidopsis thaliana T-DNA mutant database with detailed information for confirmed insertions
PMID: 17062622
metasource: Fairsharing.org
version: FAIRsharing.org: GABI-Kat; GABI-Kat SimpleSearch; DOI: https://doi.org/10.25504/FAIRsharing.hg2xzw; Last edited: Jan. 8, 2019, 1:13 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

GABI-Kat SimpleSearch: a flanking sequence tag (FST) database for the identification of T-DNA insertion mutants in Arabidopsis thaliana
PMID: 12874060
metasource: Fairsharing.org
version: FAIRsharing.org: GABI-Kat; GABI-Kat SimpleSearch; DOI: https://doi.org/10.25504/FAIRsharing.hg2xzw; Last edited: Jan. 8, 2019, 1:13 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

T-DNA-mediated transfer of Agrobacterium tumefaciens chromosomal DNA into plants
PMID: 18758448
metasource: Fairsharing.org
version: FAIRsharing.org: GABI-Kat; GABI-Kat SimpleSearch; DOI: https://doi.org/10.25504/FAIRsharing.hg2xzw; Last edited: Jan. 8, 2019, 1:13 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

High-throughput generation of sequence indexes from T-DNA mutagenized Arabidopsis thaliana lines
PMID: 14682050
metasource: Fairsharing.org
version: FAIRsharing.org: GABI-Kat; GABI-Kat SimpleSearch; DOI: https://doi.org/10.25504/FAIRsharing.hg2xzw; Last edited: Jan. 8, 2019, 1:13 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

Analysis of T-DNA insertion site distribution patterns in Arabidopsis thaliana reveals special features of genes without insertions
PMID: 16488113
metasource: Fairsharing.org
version: FAIRsharing.org: GABI-Kat; GABI-Kat SimpleSearch; DOI: https://doi.org/10.25504/FAIRsharing.hg2xzw; Last edited: Jan. 8, 2019, 1:13 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics PubMed citations: 369.

369 articles citing: An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics

Mapping-by-Sequencing Reveals Genomic Regions Associated with Seed Quality Parameters in Brassica napus. PMID:35885914
The phytochrome interacting proteins ERF55 and ERF58 repress light-induced seed germination in Arabidopsis thaliana. PMID:35351902
SEC1A is a major Arabidopsis Sec1/Munc18 gene in vesicle trafficking during pollen tube tip growth. PMID:35306707
Nuclear and cytoplasmic RNA exosomes and PELOTA1 prevent miRNA-induced secondary siRNA production in Arabidopsis. PMID:35037064
Telomerase Interaction Partners-Insight from Plants. PMID:35008793
ROS-Scavengers, Osmoprotectants and Violaxanthin De-Epoxidation in Salt-Stressed Arabidopsis thaliana with Different Tocopherol Composition. PMID:34768798
Macroscopic variation in Arabidopsis mutants despite stomatal uniformity across soil nutrient environments. PMID:34606015
Large scale genomic rearrangements in selected Arabidopsis thaliana T-DNA lines are caused by T-DNA insertion mutagenesis. PMID:34362298
Spatially Enriched Paralog Rearrangements Argue Functionally Diverse Ribosomes Arise during Cold Acclimation in Arabidopsis. PMID:34200446
Ribosome biogenesis factor OLI2 and its interactor BRX1-2 are associated with morphogenesis and lifespan extension in Arabidopsis thaliana. PMID:34177331
PRAT Proteins Operate in Organellar Protein Import and Export in Arabidopsis thaliana. PMID:34064964
UGT76B1, a promiscuous hub of small molecule-based immune signaling, glucosylates N-hydroxypipecolic acid, and balances plant immunity. PMID:33955482
DOTFL1 affects the floral transition in orchid Dendrobium Chao Praya Smile. PMID:33930147
Insights into the Transcriptional Regulation of Branching Hormonal Signaling Pathways Genes under Drought Stress in Arabidopsis. PMID:33672598
Arabidopsis Ca2+-ATPases 1, 2, and 7 in the endoplasmic reticulum contribute to growth and pollen fitness. PMID:33575795
Arabidopsis REI-LIKE proteins activate ribosome biogenesis during cold acclimation. PMID:33510206
Longin R-SNARE is retrieved from the plasma membrane by ANTH domain-containing proteins in Arabidopsis. PMID:32968023
Na+ Transporter SvHKT1;1 from a Halophytic Turf Grass Is Specifically Upregulated by High Na+ Concentration and Regulates Shoot Na+ Concentration. PMID:32847126
Mobile TERMINAL FLOWER1 determines seed size in Arabidopsis. PMID:32839516
TRANSPARENT TESTA GLABRA1, a Key Regulator in Plants with Multiple Roles and Multiple Function Mechanisms. PMID:32664363
Arabidopsis SMALL DEFENSE-ASSOCIATED PROTEIN 1 Modulates Pathogen Defense and Tolerance to Oxidative Stress. PMID:32582244
PWR/HDA9/ABI4 Complex Epigenetically Regulates ABA Dependent Drought Stress Tolerance in Arabidopsis. PMID:32528497
Arabidopsis Ubiquitin-Conjugating Enzymes UBC7, UBC13, and UBC14 Are Required in Plant Responses to Multiple Stress Conditions. PMID:32521733
The Position and Complex Genomic Architecture of Plant T-DNA Insertions Revealed by 4SEE. PMID:32235482
High Contiguity De Novo Genome Sequence Assembly of Trifoliate Yam (Dioscorea dumetorum) Using Long Read Sequencing. PMID:32143301
TRANSPARENT TESTA GLABRA 1 participates in flowering time regulation in Arabidopsis thaliana. PMID:31998554
Non-Catalytic Subunits Facilitate Quaternary Organization of Plastidic Acetyl-CoA Carboxylase. PMID:31792149
NatB-Mediated N-Terminal Acetylation Affects Growth and Biotic Stress Responses. PMID:31744933
Twenty-Five Years of Propagation in Suspension Cell Culture Results in Substantial Alterations of the Arabidopsis Thaliana Genome. PMID:31480756
TDNAscan: A Software to Identify Complete and Truncated T-DNA Insertions. PMID:31428129
PAWH1 and PAWH2 are plant-specific components of an Arabidopsis endoplasmic reticulum-associated degradation complex. PMID:31375683
Arabidopsis NSE4 Proteins Act in Somatic Nuclei and Meiosis to Ensure Plant Viability and Fertility. PMID:31281325
Directions for research and training in plant omics: Big Questions and Big Data. PMID:31245771
The Plastid Lipase PLIP1 Is Critical for Seed Viability in diacylglycerol acyltransferase1 Mutant Seed. PMID:31221730
NCP activates chloroplast transcription by controlling phytochrome-dependent dual nuclear and plastidial switches. PMID:31201314
Combining next-generation sequencing and progeny testing for rapid identification of induced recessive and dominant mutations in maize M2 individuals. PMID:31169333
A Protochlorophyllide (Pchlide) a Oxygenase for Plant Viability. PMID:31156665
A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set. PMID:31112551
Nitrate acts at the Arabidopsis thaliana shoot apical meristem to regulate flowering time. PMID:30903620
Mitochondrial Pyruvate Dehydrogenase Contributes to Auxin-Regulated Organ Development. PMID:30894418
The Photorespiratory BOU Gene Mutation Alters Sulfur Assimilation and Its Crosstalk With Carbon and Nitrogen Metabolism in Arabidopsis thaliana. PMID:30559749
Regulation of Root Angle and Gravitropism. PMID:30322904
Time-Course Transcriptome Analysis of Arabidopsis Siliques Discloses Genes Essential for Fruit Development and Maturation. PMID:30275057
Recombination between T-DNA insertions to cause chromosomal deletions in Arabidopsis is a rare phenomenon. PMID:30002957
NMT1 and NMT3 N-Methyltransferase Activity Is Critical to Lipid Homeostasis, Morphogenesis, and Reproduction. PMID:29777000
A broadly conserved NERD genetically interacts with the exocyst to affect root growth and cell expansion. PMID:29722827
A NIGT1-centred transcriptional cascade regulates nitrate signalling and incorporates phosphorus starvation signals in Arabidopsis. PMID:29636481
Identification of ZHOUPI Orthologs in Rice Involved in Endosperm Development and Cuticle Formation. PMID:29541083
Stable Accumulation of Photosystem II Requires ONE-HELIX PROTEIN1 (OHP1) of the Light Harvesting-Like Family. PMID:29438089
Plant Temperature Acclimation and Growth Rely on Cytosolic Ribosome Biogenesis Factor Homologs. PMID:29382692
Pi starvation-dependent regulation of ethanolamine metabolism by phosphoethanolamine phosphatase PECP1 in Arabidopsis roots. PMID:29294054
TRANSPARENT TESTA GLABRA 1-Dependent Regulation of Flavonoid Biosynthesis. PMID:29261137
Reduced Expression of APUM24, Encoding a Novel rRNA Processing Factor, Induces Sugar-Dependent Nucleolar Stress and Altered Sugar Responses in Arabidopsis thaliana. PMID:29242314
Non-specific activities of the major herbicide-resistance gene BAR. PMID:29180815
The DEAD-box RNA Helicase RH50 Is a 23S-4.5S rRNA Maturation Factor that Functionally Overlaps with the Plastid Signaling Factor GUN1. PMID:29138350
Cell type boundaries organize plant development. PMID:28895530
Roles of miR319 and TCP Transcription Factors in Leaf Development. PMID:28842549
Specificity versus redundancy in the RAP2.4 transcription factor family of Arabidopsis thaliana: transcriptional regulation of genes for chloroplast peroxidases. PMID:28835225
Inhibition of RNA polymerase II allows controlled mobilisation of retrotransposons for plant breeding. PMID:28687080
Gene Duplication Leads to Altered Membrane Topology of a Cytochrome P450 Enzyme in Seed Plants. PMID:28505373
Root Cell-Specific Regulators of Phosphate-Dependent Growth. PMID:28465462
Morphological phenotyping and genetic analyses of a new chemical-mutagenized population of tobacco (Nicotiana tabacum L.). PMID:28401357
Genomic and Phenomic Screens for Flower Related RING Type Ubiquitin E3 Ligases in Arabidopsis. PMID:28400782
A collection of enhancer trap insertional mutants for functional genomics in tomato. PMID:28317264
CmFTL2 is involved in the photoperiod- and sucrose-mediated control of flowering time in chrysanthemum. PMID:28243451
Identification of ZOUPI Orthologs in Soybean Potentially Involved in Endosperm Breakdown and Embryogenic Development. PMID:28228767
No Silver Bullet - Canonical Poly(ADP-Ribose) Polymerases (PARPs) Are No Universal Factors of Abiotic and Biotic Stress Resistance of Arabidopsis thaliana. PMID:28220129
An Arabidopsis Natural Epiallele Maintained by a Feed-Forward Silencing Loop between Histone and DNA. PMID:28060933
Enhancing the GABI-Kat Arabidopsis thaliana T-DNA Insertion Mutant Database by Incorporating Araport11 Annotation. PMID:28013277
The RTR Complex Partner RMI2 and the DNA Helicase RTEL1 Are Both Independently Involved in Preserving the Stability of 45S rDNA Repeats in Arabidopsis thaliana. PMID:27760121
ABA-dependent control of GIGANTEA signalling enables drought escape via up-regulation of FLOWERING LOCUS T in Arabidopsis thaliana. PMID:27733440
A De Novo Genome Sequence Assembly of the Arabidopsis thaliana Accession Niederzenz-1 Displays Presence/Absence Variation and Strong Synteny. PMID:27711162
Flavonoids are determinants of freezing tolerance and cold acclimation in Arabidopsis thaliana. PMID:27658445
A Role for TIC55 as a Hydroxylase of Phyllobilins, the Products of Chlorophyll Breakdown during Plant Senescence. PMID:27655840
RPT2/NCH1 subfamily of NPH3-like proteins is essential for the chloroplast accumulation response in land plants. PMID:27578868
PIF1-Interacting Transcription Factors and Their Binding Sequence Elements Determine the in Vivo Targeting Sites of PIF1. PMID:27303023
Requirement for flap endonuclease 1 (FEN1) to maintain genomic stability and transcriptional gene silencing in Arabidopsis. PMID:27231839
Shared and distinct functions of the pseudokinase CORYNE (CRN) in shoot and root stem cell maintenance of Arabidopsis. PMID:27229734
A voltage-dependent chloride channel fine-tunes photosynthesis in plants. PMID:27216227
Arabidopsis NATA1 Acetylates Putrescine and Decreases Defense-Related Hydrogen Peroxide Accumulation. PMID:27208290
The Second Subunit of DNA Polymerase Delta Is Required for Genomic Stability and Epigenetic Regulation. PMID:27208288
Phylogenetic and Genomic Analyses Resolve the Origin of Important Plant Genes Derived from Transposable Elements. PMID:27189548
Reduced function of the RNA-binding protein FPA rescues a T-DNA insertion mutant in the Arabidopsis ZHOUPI gene by promoting transcriptional read-through. PMID:27164978
The Evolutionarily Conserved Protein PHOTOSYNTHESIS AFFECTED MUTANT71 Is Required for Efficient Manganese Uptake at the Thylakoid Membrane in Arabidopsis. PMID:27020959
Decreased Expression of a Gene Caused by a T-DNA Insertion in an Adjacent Gene in Arabidopsis. PMID:26828726
Analysis of two TFL1 homologs of dogwood species (Cornus L.) indicates functional conservation in control of transition to flowering. PMID:26825444
RNA Sequencing Analysis of the msl2msl3, crl, and ggps1 Mutants Indicates that Diverse Sources of Plastid Dysfunction Do Not Alter Leaf Morphology Through a Common Signaling Pathway. PMID:26734046
The Vacuolar Manganese Transporter MTP8 Determines Tolerance to Iron Deficiency-Induced Chlorosis in Arabidopsis. PMID:26668333
Cytokinin response factors regulate PIN-FORMED auxin transporters. PMID:26541513
Role of a chalcone isomerase-like protein in flavonoid biosynthesis in Arabidopsis thaliana. PMID:26347569
Arabidopsis ALIX is required for the endosomal localization of the deubiquitinating enzyme AMSH3. PMID:26324913
Development and analysis of a highly flexible multi-gene expression system for metabolic engineering in Arabidopsis seeds and other plant tissues. PMID:26254605
The Arabidopsis information resource: Making and mining the "gold standard" annotated reference plant genome. PMID:26201819
A Member of the Arabidopsis Mitochondrial Transcription Termination Factor Family Is Required for Maturation of Chloroplast Transfer RNAIle(GAU). PMID:26152711
SCARECROW-LIKE15 interacts with HISTONE DEACETYLASE19 and is essential for repressing the seed maturation programme. PMID:26129778
Transcriptional repression by MYB3R proteins regulates plant organ growth. PMID:26069325
Frequent problems and their resolutions by using thermal asymmetric interlaced PCR (TAIL-PCR) to clone genes in Arabidopsis T-DNA tagged mutants. PMID:26019639
ITIS, a bioinformatics tool for accurate identification of transposon insertion sites using next-generation sequencing data. PMID:25887332
DENEDDYLASE1 deconjugates NEDD8 from non-cullin protein substrates in Arabidopsis thaliana. PMID:25783028
The nuclease FAN1 is involved in DNA crosslink repair in Arabidopsis thaliana independently of the nuclease MUS81. PMID:25779053
A user's guide to the Arabidopsis T-DNA insertion mutant collections. PMID:25757780
Developmentally distinct activities of the exocyst enable rapid cell elongation and determine meristem size during primary root growth in Arabidopsis. PMID:25551204
AtSIG6 and other members of the sigma gene family jointly but differentially determine plastid target gene expression in Arabidopsis thaliana. PMID:25505479
Ion antiport accelerates photosynthetic acclimation in fluctuating light environments. PMID:25451040
Decreasing electron flux through the cytochrome and/or alternative respiratory pathways triggers common and distinct cellular responses dependent on growth conditions. PMID:25378695
An easy-to-use primer design tool to address paralogous loci and T-DNA insertion sites in the genome of Arabidopsis thaliana. PMID:25324895
Reliable in silico identification of sequence polymorphisms and their application for extending the genetic map of sugar beet (Beta vulgaris). PMID:25302600
PERK-KIPK-KCBP signalling negatively regulates root growth in Arabidopsis thaliana. PMID:25262228
Update on transparent testa mutants from Arabidopsis thaliana: characterisation of new alleles from an isogenic collection. PMID:24903359
Dissecting a hidden gene duplication: the Arabidopsis thaliana SEC10 locus. PMID:24728280
Divergent functions of the Arabidopsis mitochondrial SCO proteins: HCC1 is essential for COX activity while HCC2 is involved in the UV-B stress response. PMID:24723925
Local evolution of seed flotation in Arabidopsis. PMID:24625826
Phenotype to genotype using forward-genetic Mu-seq for identification and functional classification of maize mutants. PMID:24432026
The global translation profile in a ribosomal protein mutant resembles that of an eIF3 mutant. PMID:24377433
GreenGate---a novel, versatile, and efficient cloning system for plant transgenesis. PMID:24376629
Kaempferol 3-O-rhamnoside-7-O-rhamnoside is an endogenous flavonol inhibitor of polar auxin transport in Arabidopsis shoots. PMID:24251900
The Arabidopsis thaliana Mob1A gene is required for organ growth and correct tissue patterning of the root tip. PMID:24201137
Roles of BOR2, a boron exporter, in cross linking of rhamnogalacturonan II and root elongation under boron limitation in Arabidopsis. PMID:24114060
The REIL1 and REIL2 proteins of Arabidopsis thaliana are required for leaf growth in the cold. PMID:24038679
Cytochrome b5 reductase encoded by CBR1 is essential for a functional male gametophyte in Arabidopsis. PMID:23995085
Targeted deletion and inversion of tandemly arrayed genes in Arabidopsis thaliana using zinc finger nucleases. PMID:23979943
LIFEGUARD proteins support plant colonization by biotrophic powdery mildew fungi. PMID:23888068
Evolutionary, molecular and genetic analyses of Tic22 homologues in Arabidopsis thaliana chloroplasts. PMID:23675512
WOX4 and WOX14 act downstream of the PXY receptor kinase to regulate plant vascular proliferation independently of any role in vascular organisation. PMID:23578929
Phosphorylation of an ERF transcription factor by Arabidopsis MPK3/MPK6 regulates plant defense gene induction and fungal resistance. PMID:23524660
Cyclic nucleotide gated channels 7 and 8 are essential for male reproductive fertility. PMID:23424627
Generation and analysis of a complete mutant set for the Arabidopsis FT/TFL1 family shows specific effects on thermo-sensitive flowering regulation. PMID:23404901
PECTIN METHYLESTERASE INHIBITOR6 promotes Arabidopsis mucilage release by limiting methylesterification of homogalacturonan in seed coat epidermal cells. PMID:23362209
Importance of adenosine-to-inosine editing adjacent to the anticodon in an Arabidopsis alanine tRNA under environmental stress. PMID:23355609
Compensatory mutations in predicted metal transporters modulate auxin conjugate responsiveness in Arabidopsis. PMID:23316445
Redundant and non-redundant roles of the trehalose-6-phosphate phosphatases in leaf growth, root hair specification and energy-responses in Arabidopsis. PMID:23299328
Forward chemical genetic screens in Arabidopsis identify genes that influence sensitivity to the phytotoxic compound sulfamethoxazole. PMID:23176361
Background-dependent effects of polyglutamine variation in the Arabidopsis thaliana gene ELF3. PMID:23129635
Metabolic and transcriptomic changes induced in Arabidopsis by the rhizobacterium Pseudomonas fluorescens SS101. PMID:23073694
Gene dosage effect of WEE1 on growth and morphogenesis from arabidopsis hypocotyl explants. PMID:23065633
A systems biology view of responses to lignin biosynthesis perturbations in Arabidopsis. PMID:23012438
Proteasome-mediated turnover of Arabidopsis MED25 is coupled to the activation of FLOWERING LOCUS T transcription. PMID:22992513
NBS1 plays a synergistic role with telomerase in the maintenance of telomeres in Arabidopsis thaliana. PMID:22985462
Impact of the absence of stem-specific β-glucosidases on lignin and monolignols. PMID:22984124
A gene family derived from transposable elements during early angiosperm evolution has reproductive fitness benefits in Arabidopsis thaliana. PMID:22969437
Analysis of T-DNA alleles of flavonoid biosynthesis genes in Arabidopsis ecotype Columbia. PMID:22947320
Reprogramming of H3K27me3 is critical for acquisition of pluripotency from cultured Arabidopsis tissues. PMID:22927830
Functional analysis of conserved motifs in the mechanosensitive channel homolog MscS-Like2 from Arabidopsis thaliana. PMID:22768278
Dual location of the mitochondrial preprotein transporters B14.7 and Tim23-2 in complex I and the TIM17:23 complex in Arabidopsis links mitochondrial activity and biogenesis. PMID:22730406
Developmentally non-redundant SET domain proteins SUVH2 and SUVH9 are required for transcriptional gene silencing in Arabidopsis thaliana. PMID:22669745
The Fanconi anemia ortholog FANCM ensures ordered homologous recombination in both somatic and meiotic cells in Arabidopsis. PMID:22547783
CDKF;1 and CDKD protein kinases regulate phosphorylation of serine residues in the C-terminal domain of Arabidopsis RNA polymerase II. PMID:22547781
The Arabidopsis ubiquitin ligases ATL31 and ATL6 control the defense response as well as the carbon/nitrogen response. PMID:22481162
Comparability of imazapyr-resistant Arabidopsis created by transgenesis and mutagenesis. PMID:22430369
The GCP3-interacting proteins GIP1 and GIP2 are required for γ-tubulin complex protein localization, spindle integrity, and chromosomal stability. PMID:22427335
Arabidopsis IRE1 catalyses unconventional splicing of bZIP60 mRNA to produce the active transcription factor. PMID:22355548
Web-based Arabidopsis functional and structural genomics resources. PMID:22303243
Glycolate oxidase modulates reactive oxygen species-mediated signal transduction during nonhost resistance in Nicotiana benthamiana and Arabidopsis. PMID:22286136
A comprehensive dataset of genes with a loss-of-function mutant phenotype in Arabidopsis. PMID:22247268
MES16, a member of the methylesterase protein family, specifically demethylates fluorescent chlorophyll catabolites during chlorophyll breakdown in Arabidopsis. PMID:22147518
GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database. PMID:22080561
NFX1-LIKE2 (NFXL2) suppresses abscisic acid accumulation and stomatal closure in Arabidopsis thaliana. PMID:22073231
A genetic screen reveals Arabidopsis stomatal and/or apoplastic defenses against Pseudomonas syringae pv. tomato DC3000. PMID:21998587
The ATG1/ATG13 protein kinase complex is both a regulator and a target of autophagic recycling in Arabidopsis. PMID:21984698
Mitochondrial and plastidial COG0354 proteins have folate-dependent functions in iron-sulphur cluster metabolism. PMID:21984653
Biosynthesis and defensive function of Nδ-acetylornithine, a jasmonate-induced Arabidopsis metabolite. PMID:21917546
Perspectives on Systematic Analyses of Gene Function in Arabidopsis thaliana: New Tools, Topics and Trends. PMID:21886450
Photosystem II supercomplex remodeling serves as an entry mechanism for state transitions in Arabidopsis. PMID:21880991
Pyrimidine degradation influences germination seedling growth and production of Arabidopsis seeds. PMID:21865177
Pairing of lacO tandem repeats in Arabidopsis thaliana nuclei requires the presence of hypermethylated, large arrays at two chromosomal positions, but does not depend on H3-lysine-9-dimethylation. PMID:21830056
The Arabidopsis deubiquitinating enzyme AMSH3 interacts with ESCRT-III subunits and regulates their localization. PMID:21810997
Two mechanosensitive channel homologs influence division ring placement in Arabidopsis chloroplasts. PMID:21810996
Perturbation of Arabidopsis amino acid metabolism causes incompatibility with the adapted biotrophic pathogen Hyaloperonospora arabidopsidis. PMID:21784950
Developmental regulation of CYCA2s contributes to tissue-specific proliferation in Arabidopsis. PMID:21772250
Cytosolic γ-glutamyl peptidases process glutathione conjugates in the biosynthesis of glucosinolates and camalexin in Arabidopsis. PMID:21712415
Acireductone dioxygenase 1 (ARD1) is an effector of the heterotrimeric G protein beta subunit in Arabidopsis. PMID:21712381
Analysis of the enhancer-blocking function of the TBS element from Petunia hybrida in transgenic Arabidopsis thaliana and Nicotiana tabacum. PMID:21706298
A membrane trafficking pathway regulated by the plant-specific RAB GTPase ARA6. PMID:21666683
The sucrose synthase-1 promoter from Citrus sinensis directs expression of the β-glucuronidase reporter gene in phloem tissue and in response to wounding in transgenic plants. PMID:21594624
Arabidopsis nitrate transporter NRT1.9 is important in phloem nitrate transport. PMID:21571952
EXORDIUM-LIKE1 promotes growth during low carbon availability in Arabidopsis. PMID:21543728
Trans-repression of gene activity upstream of T-DNA tagged RLK902 links Arabidopsis root growth inhibition and downy mildew resistance. PMID:21532992
The phosphatidylcholine-hydrolysing phospholipase C NPC4 plays a role in response of Arabidopsis roots to salt stress. PMID:21525137
The interconversion of UDP-arabinopyranose and UDP-arabinofuranose is indispensable for plant development in Arabidopsis. PMID:21478444
High-throughput phenotyping of multicellular organisms: finding the link between genotype and phenotype. PMID:21457493
Probing the roles of LRR RLK genes in Arabidopsis thaliana roots using a custom T-DNA insertion set. PMID:21431781
A plant-specific transcription factor IIB-related protein, pBRP2, is involved in endosperm growth control. PMID:21390310
Novel sulI binary vectors enable an inexpensive foliar selection method in Arabidopsis. PMID:21366919
The Arabidopsis peptide kiss of death is an inducer of programmed cell death. PMID:21326210
Characterization of JAZ-interacting bHLH transcription factors that regulate jasmonate responses in Arabidopsis. PMID:21321051
Cytokinin regulates the activity of reproductive meristems, flower organ size, ovule formation, and thus seed yield in Arabidopsis thaliana. PMID:21224426
Loss-of-function mutation of REDUCED WALL ACETYLATION2 in Arabidopsis leads to reduced cell wall acetylation and increased resistance to Botrytis cinerea. PMID:21212300
Analysis of TETRAKETIDE α-PYRONE REDUCTASE function in Arabidopsis thaliana reveals a previously unknown, but conserved, biochemical pathway in sporopollenin monomer biosynthesis. PMID:21193572
LAP6/POLYKETIDE SYNTHASE A and LAP5/POLYKETIDE SYNTHASE B encode hydroxyalkyl α-pyrone synthases required for pollen development and sporopollenin biosynthesis in Arabidopsis thaliana. PMID:21193570
Metabolic sugar signal promotes Arabidopsis meristematic proliferation via G2. PMID:21185286
Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. PMID:21139083
TCP transcription factors regulate the activities of ASYMMETRIC LEAVES1 and miR164, as well as the auxin response, during differentiation of leaves in Arabidopsis. PMID:21119060
Involvement of Arabidopsis RACK1 in protein translation and its regulation by abscisic acid. PMID:21098678
Herbivore-induced and floral homoterpene volatiles are biosynthesized by a single P450 enzyme (CYP82G1) in Arabidopsis. PMID:21088219
Betaine aldehyde dehydrogenase genes from Arabidopsis with different sub-cellular localization affect stress responses. PMID:21053011
RAD5A, RECQ4A, and MUS81 have specific functions in homologous recombination and define different pathways of DNA repair in Arabidopsis thaliana. PMID:20971895
The Arabidopsis thylakoid protein PAM68 is required for efficient D1 biogenesis and photosystem II assembly. PMID:20923938
The Arabidopsis Botrytis Susceptible1 Interactor defines a subclass of RING E3 ligases that regulate pathogen and stress responses. PMID:20921156
Three endo-β-mannanase genes expressed in the micropylar endosperm and in the radicle influence germination of Arabidopsis thaliana seeds. PMID:20878180
Mitochondrial malate dehydrogenase lowers leaf respiration and alters photorespiration and plant growth in Arabidopsis. PMID:20876337
The Arabidopsis exocyst complex is involved in cytokinesis and cell plate maturation. PMID:20870962
Pea chloroplast DnaJ-J8 and Toc12 are encoded by the same gene and localized in the stroma. PMID:20841453
BRCC36A is epistatic to BRCA1 in DNA crosslink repair and homologous recombination in Arabidopsis thaliana. PMID:20817926
Reverse genetics in eukaryotes. PMID:20812916
BRIZ1 and BRIZ2 proteins form a heteromeric E3 ligase complex required for seed germination and post-germination growth in Arabidopsis thaliana. PMID:20810661
CLE peptides can negatively regulate protoxylem vessel formation via cytokinin signaling. PMID:20802224
Lack of α-xylosidase activity in Arabidopsis alters xyloglucan composition and results in growth defects. PMID:20801759
Phosphoenolpyruvate provision to plastids is essential for gametophyte and sporophyte development in Arabidopsis thaliana. PMID:20798327
TDIF peptide signaling regulates vascular stem cell proliferation via the WOX4 homeobox gene in Arabidopsis. PMID:20729381
Tethering factors required for cytokinesis in Arabidopsis. PMID:20713617
Both the constitutive cauliflower mosaic virus 35S and tissue-specific AGAMOUS enhancers activate transcription autonomously in Arabidopsis thaliana. PMID:20703807
The TOR pathway modulates the structure of cell walls in Arabidopsis. PMID:20530756
The conserved splicing factor SUA controls alternative splicing of the developmental regulator ABI3 in Arabidopsis. PMID:20525852
Arabidopsis stromal 70-kDa heat shock proteins are essential for chloroplast development. PMID:20506024
Non-redundant functions of two proline dehydrogenase isoforms in Arabidopsis. PMID:20403182
miR390, Arabidopsis TAS3 tasiRNAs, and their AUXIN RESPONSE FACTOR targets define an autoregulatory network quantitatively regulating lateral root growth. PMID:20363771
The RST and PARP-like domain containing SRO protein family: analysis of protein structure, function and conservation in land plants. PMID:20226034
AtSIG6, a plastid sigma factor from Arabidopsis, reveals functional impact of cpCK2 phosphorylation. PMID:20088902
Arabidopsis uracil DNA glycosylase (UNG) is required for base excision repair of uracil and increases plant sensitivity to 5-fluorouracil. PMID:20056608
Arabidopsis Tic62 and ferredoxin-NADP(H) oxidoreductase form light-regulated complexes that are integrated into the chloroplast redox poise. PMID:20040542
The D-type cyclin CYCD4;1 modulates lateral root density in Arabidopsis by affecting the basal meristem region. PMID:20018777
A high-density collection of EMS-induced mutations for TILLING in Landsberg erecta genetic background of Arabidopsis. PMID:20003424
Members of the LBD family of transcription factors repress anthocyanin synthesis and affect additional nitrogen responses in Arabidopsis. PMID:19933203
Involvement of Arabidopsis thaliana phospholipase Dzeta2 in root hydrotropism through the suppression of root gravitropism. PMID:19915862
Disruption of poly(ADP-ribosyl)ation mechanisms alters responses of Arabidopsis to biotic stress. PMID:19889874
ARABIDOPSIS TRITHORAX-RELATED7 is required for methylation of lysine 4 of histone H3 and for transcriptional activation of FLOWERING LOCUS C. PMID:19855050
Integrating the genetic and physical maps of Arabidopsis thaliana: identification of mapped alleles of cloned essential (EMB) genes. PMID:19812694
OWL1: an Arabidopsis J-domain protein involved in perception of very low light fluences. PMID:19808946
Phage-type RNA polymerase RPOTmp performs gene-specific transcription in mitochondria of Arabidopsis thaliana. PMID:19783760
Coordination of plastid protein import and nuclear gene expression by plastid-to-nucleus retrograde signaling. PMID:19726569
Starch granule initiation in Arabidopsis requires the presence of either class IV or class III starch synthases. PMID:19666739
AtObgC, a plant ortholog of bacterial Obg, is a chloroplast-targeting GTPase essential for early embryogenesis. PMID:19636801
Arabidopsis tRNA adenosine deaminase arginine edits the wobble nucleotide of chloroplast tRNAArg(ACG) and is essential for efficient chloroplast translation. PMID:19602623
Arabidopsis thaliana encodes a bacterial-type heterodimeric isopropylmalate isomerase involved in both Leu biosynthesis and the Met chain elongation pathway of glucosinolate formation. PMID:19597944
AINTEGUMENTA and AINTEGUMENTA-LIKE6 act redundantly to regulate Arabidopsis floral growth and patterning. PMID:19542297
Cohesin gene defects may impair sister chromatid alignment and genome stability in Arabidopsis thaliana. PMID:19533160
Phenome analysis in plant species using loss-of-function and gain-of-function mutants. PMID:19502383
The role of annexin 1 in drought stress in Arabidopsis. PMID:19482919
A functional analysis of the pyrimidine catabolic pathway in Arabidopsis. PMID:19413687
A comparative genomics approach identifies a PPR-DYW protein that is essential for C-to-U editing of the Arabidopsis chloroplast accD transcript. PMID:19395655
A transformation booster sequence (TBS) from Petunia hybrida functions as an enhancer-blocking insulator in Arabidopsis thaliana. PMID:19373469
Loss of chloroplast protease SPPA function alters high light acclimation processes in Arabidopsis thaliana L. (Heynh.). PMID:19349419
A single vegetative actin isovariant overexpressed under the control of multiple regulatory sequences is sufficient for normal Arabidopsis development. PMID:19304937
Pheophytin pheophorbide hydrolase (pheophytinase) is involved in chlorophyll breakdown during leaf senescence in Arabidopsis. PMID:19304936
The Arabidopsis RING finger E3 ligase RHA2a is a novel positive regulator of abscisic acid signaling during seed germination and early seedling development. PMID:19286935
Roles for Arabidopsis CAMTA transcription factors in cold-regulated gene expression and freezing tolerance. PMID:19270186
Protocol: Streamlined sub-protocols for floral-dip transformation and selection of transformants in Arabidopsis thaliana. PMID:19250520
The Rab GTPase RabA4d regulates pollen tube tip growth in Arabidopsis thaliana. PMID:19208902
GASA5, a regulator of flowering time and stem growth in Arabidopsis thaliana. PMID:19190987
A novel ATM-dependent X-ray-inducible gene is essential for both plant meiosis and gametogenesis. PMID:19187040
ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE1 (ADPG1), ADPG2, and QUARTET2 are Polygalacturonases required for cell separation during reproductive development in Arabidopsis. PMID:19168715
STARCH-EXCESS4 is a laforin-like Phosphoglucan phosphatase required for starch degradation in Arabidopsis thaliana. PMID:19141707
Subunit compositions of the RNA-silencing enzymes Pol IV and Pol V reveal their origins as specialized forms of RNA polymerase II. PMID:19110459
Topoisomerase 3alpha and RMI1 suppress somatic crossovers and are essential for resolution of meiotic recombination intermediates in Arabidopsis thaliana. PMID:19096507
AtAMT1;4, a pollen-specific high-affinity ammonium transporter of the plasma membrane in Arabidopsis. PMID:19073648
Identification of two Arabidopsis genes encoding a peroxisomal oxidoreductase-like protein and an acyl-CoA synthetase-like protein that are required for responses to pro-auxins. PMID:19043666
The MYST histone acetyltransferases are essential for gametophyte development in Arabidopsis. PMID:19040736
Arabidopsis bZIP60 is a proteolysis-activated transcription factor involved in the endoplasmic reticulum stress response. PMID:19017746
Highly boron deficiency-tolerant plants generated by enhanced expression of NIP5;1, a boric acid channel. PMID:19017629
A heterocomplex of iron superoxide dismutases defends chloroplast nucleoids against oxidative stress and is essential for chloroplast development in Arabidopsis. PMID:18996978
A SNARE complex unique to seed plants is required for protein storage vacuole biogenesis and seed development of Arabidopsis thaliana. PMID:18984676
Identification and characterization of ADNT1, a novel mitochondrial adenine nucleotide transporter from Arabidopsis. PMID:18923018
Genetic analysis reveals that C19-GA 2-oxidation is a major gibberellin inactivation pathway in Arabidopsis. PMID:18805991
Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. PMID:18805951
Sex-biased lethality or transmission of defective transcription machinery in Arabidopsis. PMID:18723889
The MADS domain protein DIANA acts together with AGAMOUS-LIKE80 to specify the central cell in Arabidopsis ovules. PMID:18713950
Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE proteins serve brassinosteroid-dependent and -independent signaling pathways. PMID:18667726
ScORK17, a transmembrane receptor-like kinase predominantly expressed in ovules is involved in seed development. PMID:18649087
The Omp85-related chloroplast outer envelope protein OEP80 is essential for viability in Arabidopsis. PMID:18621981
Articulation of three core metabolic processes in Arabidopsis: fatty acid biosynthesis, leucine catabolism and starch metabolism. PMID:18616834
Systems approaches to identifying gene regulatory networks in plants. PMID:18616425
AGL61 interacts with AGL80 and is required for central cell development in Arabidopsis. PMID:18599653
Two distinct interacting classes of nuclear envelope-associated coiled-coil proteins are required for the tissue-specific nuclear envelope targeting of Arabidopsis RanGAP. PMID:18591351
RETARDED GROWTH OF EMBRYO1, a new basic helix-loop-helix protein, expresses in endosperm to control embryo growth. PMID:18567831
Involvement of sphingosine kinase in plant cell signalling. PMID:18557834
Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana. PMID:18550839
A 125 kDa RNase E/G-like protein is present in plastids and is essential for chloroplast development and autotrophic growth in Arabidopsis. PMID:18515828
An exocyst complex functions in plant cell growth in Arabidopsis and tobacco. PMID:18492870
Functional analysis of a predicted flavonol synthase gene family in Arabidopsis. PMID:18467451
Ggamma1 + Ggamma2 not equal to Gbeta: heterotrimeric G protein Ggamma-deficient mutants do not recapitulate all phenotypes of Gbeta-deficient mutants. PMID:18441222
A genome-wide functional investigation into the roles of receptor-like proteins in Arabidopsis. PMID:18434605
Cell wall modifications in Arabidopsis plants with altered alpha-L-arabinofuranosidase activity. PMID:18344421
The Arabidopsis thaliana type I Isopentenyl Diphosphate Isomerases are targeted to multiple subcellular compartments and have overlapping functions in isoprenoid biosynthesis. PMID:18319397
Degradation of a polyadenylated rRNA maturation by-product involves one of the three RRP6-like proteins in Arabidopsis thaliana. PMID:18285452
A LysM receptor-like kinase plays a critical role in chitin signaling and fungal resistance in Arabidopsis. PMID:18263776
The OSU1/QUA2/TSD2-encoded putative methyltransferase is a critical modulator of carbon and nitrogen nutrient balance response in Arabidopsis. PMID:18167546
Arabidopsis branched-chain aminotransferase 3 functions in both amino acid and glucosinolate biosynthesis. PMID:18162591
Functions of chloroplastic adenylate kinases in Arabidopsis. PMID:18162585
A systems biology approach identifies a R2R3 MYB gene subfamily with distinct and overlapping functions in regulation of aliphatic glucosinolates. PMID:18094747
VPS9a, the common activator for two distinct types of Rab5 GTPases, is essential for the development of Arabidopsis thaliana. PMID:18055610
Redirection of the phenylpropanoid pathway to feruloyl malate in Arabidopsis mutants deficient for cinnamoyl-CoA reductase 1. PMID:18046574
PHYTOCHROME KINASE SUBSTRATE1 regulates root phototropism and gravitropism. PMID:18024556
Two closely related RecQ helicases have antagonistic roles in homologous recombination and DNA repair in Arabidopsis thaliana. PMID:18000056
Functional definition of outer membrane proteins involved in preprotein import into mitochondria. PMID:17981999
The catalytically active tyrosine residues of both SPO11-1 and SPO11-2 are required for meiotic double-strand break induction in Arabidopsis. PMID:17965269
INCURVATA2 encodes the catalytic subunit of DNA Polymerase alpha and interacts with genes involved in chromatin-mediated cellular memory in Arabidopsis thaliana. PMID:17873092
A cyclic nucleotide-gated channel is essential for polarized tip growth of pollen. PMID:17726111
Nitration of gamma-tocopherol in plant tissues. PMID:17619201
Both caffeoyl Coenzyme A 3-O-methyltransferase 1 and caffeic acid O-methyltransferase 1 are involved in redundant functions for lignin, flavonoids and sinapoyl malate biosynthesis in Arabidopsis. PMID:17594112
TLP18.3, a novel thylakoid lumen protein regulating photosystem II repair cycle. PMID:17576201
Arabidopsis cytochrome P450 monooxygenase 71A13 catalyzes the conversion of indole-3-acetaldoxime in camalexin synthesis. PMID:17573535
Arabidopsis VIRE2 INTERACTING PROTEIN2 is required for Agrobacterium T-DNA integration in plants. PMID:17496122
Sequence-indexed mutations in maize using the UniformMu transposon-tagging population. PMID:17490480
A bona fide La protein is required for embryogenesis in Arabidopsis thaliana. PMID:17459889
The iron-responsive element (IRE)/iron-regulatory protein 1 (IRP1)-cytosolic aconitase iron-regulatory switch does not operate in plants. PMID:17437406
Characterization of the VIER F-BOX PROTEINE genes from Arabidopsis reveals their importance for plant growth and development. PMID:17435085
The nuclear-encoded factor HCF173 is involved in the initiation of translation of the psbA mRNA in Arabidopsis thaliana. PMID:17435084
Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling. PMID:17419845
The DELLA domain of GA INSENSITIVE mediates the interaction with the GA INSENSITIVE DWARF1A gibberellin receptor of Arabidopsis. PMID:17416730
Molecular characterisation of the STRUBBELIG-RECEPTOR FAMILY of genes encoding putative leucine-rich repeat receptor-like kinases in Arabidopsis thaliana. PMID:17397538
A permeable cuticle in Arabidopsis leads to a strong resistance to Botrytis cinerea. PMID:17396154
Genetic interactions of TGA transcription factors in the regulation of pathogenesis-related genes and disease resistance in Arabidopsis. PMID:17369431
TERMINAL FLOWER1 is a mobile signal controlling Arabidopsis architecture. PMID:17369370
A core subunit of the RNA-processing/degrading exosome specifically influences cuticular wax biosynthesis in Arabidopsis. PMID:17351114
PIC1, an ancient permease in Arabidopsis chloroplasts, mediates iron transport. PMID:17337631
The Arabidopsis thaliana homolog of yeast BRE1 has a function in cell cycle regulation during early leaf and root growth. PMID:17329565
The absence of histone H2B monoubiquitination in the Arabidopsis hub1 (rdo4) mutant reveals a role for chromatin remodeling in seed dormancy. PMID:17329563
The WRKY70 transcription factor of Arabidopsis influences both the plant senescence and defense signaling pathways. PMID:17310369
Identification of two protein kinases required for abscisic acid regulation of seed germination, root growth, and gene expression in Arabidopsis. PMID:17307925
Arabidopsis BRANCHED1 acts as an integrator of branching signals within axillary buds. PMID:17307924
An early nodulin-like protein accumulates in the sieve element plasma membrane of Arabidopsis. PMID:17293437
The WiscDsLox T-DNA collection: an arabidopsis community resource generated by using an improved high-throughput T-DNA sequencing pipeline. PMID:17186119
Two Arabidopsis threonine aldolases are nonredundant and compete with threonine deaminase for a common substrate pool. PMID:17172352
Arabidopsis DCP2, DCP1, and VARICOSE form a decapping complex required for postembryonic development. PMID:17158604
ATAB2 is a novel factor in the signalling pathway of light-controlled synthesis of photosystem proteins. PMID:17139246
Arabidopsis CUP-SHAPED COTYLEDON3 regulates postembryonic shoot meristem and organ boundary formation. PMID:17122068
The transcription factors WRKY11 and WRKY17 act as negative regulators of basal resistance in Arabidopsis thaliana. PMID:17114354
The balance between the MIR164A and CUC2 genes controls leaf margin serration in Arabidopsis. PMID:17098808
A heat-inducible transcription factor, HsfA2, is required for extension of acquired thermotolerance in Arabidopsis. PMID:17085506
GABI-Kat SimpleSearch: an Arabidopsis thaliana T-DNA mutant database with detailed information for confirmed insertions. PMID:17062622
Branched-chain aminotransferase4 is part of the chain elongation pathway in the biosynthesis of methionine-derived glucosinolates in Arabidopsis. PMID:17056707
Dual function of an Arabidopsis transcription factor DREB2A in water-stress-responsive and heat-stress-responsive gene expression. PMID:17030801
Aconitase plays a role in regulating resistance to oxidative stress and cell death in Arabidopsis and Nicotiana benthamiana. PMID:17013749
The role of AtMUS81 in DNA repair and its genetic interaction with the helicase AtRecQ4A. PMID:16945961
Dual temporal role of plastid sigma factor 6 in Arabidopsis development. PMID:16905663
The Arabidopsis Bio2 protein requires mitochondrial targeting for activity. PMID:16897469
The putative SWI/SNF complex subunit BRAHMA activates flower homeotic genes in Arabidopsis thaliana. PMID:16845477
PHYTOCHROME KINASE SUBSTRATE 1 is a phototropin 1 binding protein required for phototropism. PMID:16777956
GLABROUS INFLORESCENCE STEMS modulates the regulation by gibberellins of epidermal differentiation and shoot maturation in Arabidopsis. PMID:16679458
Highly specific gene silencing by artificial microRNAs in Arabidopsis. PMID:16531494
Arabidopsis Hsa32, a novel heat shock protein, is essential for acquired thermotolerance during long recovery after acclimation. PMID:16500991
Mutation in a homolog of yeast Vps53p accounts for the heat and osmotic hypersensitive phenotypes in Arabidopsis hit1-1 mutant. PMID:16408208
Arabidopsis cytokinin receptor mutants reveal functions in shoot growth, leaf senescence, seed size, germination, root development, and cytokinin metabolism. PMID:16361392
A rapid and versatile combined DNA/RNA extraction protocol and its application to the analysis of a novel DNA marker set polymorphic between Arabidopsis thaliana ecotypes Col-0 and Landsberg erecta. PMID:16270938
Identification of three urease accessory proteins that are required for urease activation in Arabidopsis. PMID:16244137
D-type cyclins activate division in the root apex to promote seed germination in Arabidopsis. PMID:16227434
Inferring hypotheses on functional relationships of genes: Analysis of the Arabidopsis thaliana subtilase gene family. PMID:16193095
CONSTANS activates SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 through FLOWERING LOCUS T to promote flowering in Arabidopsis. PMID:16183837
SWI3 subunits of putative SWI/SNF chromatin-remodeling complexes play distinct roles during Arabidopsis development. PMID:16055636
Mutational and expression analysis of ELIP1 and ELIP2 in Arabidopsis thaliana. PMID:16028115
The evolutionarily conserved TOUGH protein is required for proper development of Arabidopsis thaliana. PMID:16024589
The MAP kinase substrate MKS1 is a regulator of plant defense responses. PMID:15990873
Transcriptional profile of the Arabidopsis root quiescent center. PMID:15937229
The Arabidopsis plastidic methionine sulfoxide reductase B proteins. Sequence and activity characteristics, comparison of the expression with plastidic methionine sulfoxide reductase A, and induction by photooxidative stress. PMID:15923321
A central role for S-nitrosothiols in plant disease resistance. PMID:15911759
A single amino acid converts a repressor to an activator of flowering. PMID:15894619
Agrobacterium-mediated transformation as a tool for functional genomics in fungi. PMID:15889258
The Arabidopsis KLUNKER gene controls cell shape changes and encodes the AtSRA1 homolog. PMID:15803414
The inositol oxygenase gene family of Arabidopsis is involved in the biosynthesis of nucleotide sugar precursors for cell-wall matrix polysaccharides. PMID:15660207
Mutation in the Arabidopisis thaliana DEK1 calpain gene perturbs endosperm and embryo development while over-expression affects organ development globally. PMID:15647902
Site preferences of insertional mutagenesis agents in Arabidopsis. PMID:15618417
Deficiency of a plastidial adenylate kinase in Arabidopsis results in elevated photosynthetic amino acid biosynthesis and enhanced growth. PMID:15618410
Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications. PMID:15489341
The Cell Wall Navigator database. A systems-based approach to organism-unrestricted mining of protein families involved in cell wall metabolism. PMID:15489283
TELOMERASE ACTIVATOR1 induces telomerase activity and potentiates responses to auxin in Arabidopsis. PMID:15486103
The SPA quartet: a family of WD-repeat proteins with a central role in suppression of photomorphogenesis in arabidopsis. PMID:15308756
Functional specialization amongst the Arabidopsis Toc159 family of chloroplast protein import receptors. PMID:15273297
The Arabidopsis AtRAD51 gene is dispensable for vegetative development but required for meiosis. PMID:15249667
Arabidopsis CAND1, an unmodified CUL1-interacting protein, is involved in multiple developmental pathways controlled by ubiquitin/proteasome-mediated protein Degradation. PMID:15208391
GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database PubMed citations: 165.

165 articles citing: GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database

Mammalian Melatonin Agonist Pharmaceuticals Stimulate Rhomboid Proteins in Plants. PMID:35883439
Vascular function of the T3/modern clade WUSCHEL-Related HOMEOBOX transcription factor genes predate apical meristem-maintenance function. PMID:35462532
2-Hydroxymelatonin Promotes Seed Germination by Increasing Reactive Oxygen Species Production and Gibberellin Synthesis in Arabidopsis thaliana. PMID:35453427
A Plastid-Bound Ankyrin Repeat Protein Controls Gametophyte and Early Embryo Development in Arabidopsis thaliana. PMID:35350296
SEC1A is a major Arabidopsis Sec1/Munc18 gene in vesicle trafficking during pollen tube tip growth. PMID:35306707
Nuclear and cytoplasmic RNA exosomes and PELOTA1 prevent miRNA-induced secondary siRNA production in Arabidopsis. PMID:35037064
Asymmetric distribution of extracellular matrix proteins in seed coat epidermal cells of Arabidopsis is determined by polar secretion. PMID:34877448
Initiation of cytosolic plant purine nucleotide catabolism involves a monospecific xanthosine monophosphate phosphatase. PMID:34824243
The ARRE RING-Type E3 Ubiquitin Ligase Negatively Regulates Cuticular Wax Biosynthesis in Arabidopsis thaliana by Controlling ECERIFERUM1 and ECERIFERUM3 Protein Levels. PMID:34764971
A network of stress-related genes regulates hypocotyl elongation downstream of selective auxin perception. PMID:34618142
A genetic approach reveals different modes of action of prefoldins. PMID:34618031
The DREAM complex represses growth in response to DNA damage in Arabidopsis. PMID:34583930
A Role for Inositol Pyrophosphates in the Metabolic Adaptations to Low Phosphate in Arabidopsis. PMID:34564416
The versatility of plant organic acid metabolism in leaves is underpinned by mitochondrial malate-citrate exchange. PMID:34498076
Large scale genomic rearrangements in selected Arabidopsis thaliana T-DNA lines are caused by T-DNA insertion mutagenesis. PMID:34362298
Guard cell endomembrane Ca2+-ATPases underpin a 'carbon memory' of photosynthetic assimilation that impacts on water-use efficiency. PMID:34326530
TRANVIA (TVA) facilitates cellulose synthase trafficking and delivery to the plasma membrane. PMID:34290139
The core autophagy machinery is not required for chloroplast singlet oxygen-mediated cell death in the Arabidopsis thaliana plastid ferrochelatase two mutant. PMID:34281507
The Plastid-Localized AtFtsHi3 Pseudo-Protease of Arabidopsis thaliana Has an Impact on Plant Growth and Drought Tolerance. PMID:34249066
The Polycomb group protein MEDEA controls cell proliferation and embryonic patterning in Arabidopsis. PMID:34192526
Unravelling the molecular basis of the dominant negative effect of myosin XI tails on P-bodies. PMID:34038472
RUS6, a DUF647-containing protein, is essential for early embryonic development in Arabidopsis thaliana. PMID:34034658
CTP Synthase 2 From Arabidopsis thaliana Is Required for Complete Embryo Development. PMID:33936137
Single-cell resolution of lineage trajectories in the Arabidopsis stomatal lineage and developing leaf. PMID:33823130
Ubiquitylome analysis reveals a central role for the ubiquitin-proteasome system in plant innate immunity. PMID:33793954
The nucleolar protein SAHY1 is involved in pre-rRNA processing and normal plant growth. PMID:33793900
Anno genominis XX: 20 years of Arabidopsis genomics. PMID:33793861
KINESIN-12E regulates metaphase spindle flux and helps control spindle size in Arabidopsis. PMID:33751090
The nucellus: between cell elimination and sugar transport. PMID:33721907
Functional and evolutionary analysis of the Arabidopsis 4R-MYB protein SNAPc4 as part of the SNAP complex. PMID:33693812
Expression of Castanea crenata Allene Oxide Synthase in Arabidopsis Improves the Defense to Phytophthora cinnamomi. PMID:33659016
Functional relationships of three NFU proteins in the biogenesis of chloroplastic iron-sulfur clusters. PMID:33553997
The Arabidopsis NOT4A E3 ligase promotes PGR3 expression and regulates chloroplast translation. PMID:33431870
Appropriate Activity Assays Are Crucial for the Specific Determination of Proline Dehydrogenase and Pyrroline-5-Carboxylate Reductase Activities. PMID:33424902
Specific PP2A Catalytic Subunits Are a Prerequisite for Positive Growth Effects in Arabidopsis Co-Cultivated with Azospirillum brasilense and Pseudomonas simiae. PMID:33396893
Abundance of metalloprotease FtsH12 modulates chloroplast development in Arabidopsis thaliana. PMID:33216923
A new role for histone demethylases in the maintenance of plant genome integrity. PMID:33107825
The Arabidopsis RLCK VI_A2 Kinase Controls Seedling and Plant Growth in Parallel with Gibberellin. PMID:33019674
Longin R-SNARE is retrieved from the plasma membrane by ANTH domain-containing proteins in Arabidopsis. PMID:32968023
Adaptive reduction of male gamete number in the selfing plant Arabidopsis thaliana. PMID:32514036
STARCH SYNTHASE5, a Noncanonical Starch Synthase-Like Protein, Promotes Starch Granule Initiation in Arabidopsis. PMID:32471861
The Peptide Hormone Receptor CEPR1 Functions in the Reproductive Tissue to Control Seed Size and Yield. PMID:32317363
Plants use identical inhibitors to protect their cell wall pectin against microbes and insects. PMID:32313638
eCALIBRATOR: A Comparative Tool to Identify Key Genes and Pathways for Eucalyptus Defense Against Biotic Stressors. PMID:32127794
A Kinase and a Glycosylase Catabolize Pseudouridine in the Peroxisome to Prevent Toxic Pseudouridine Monophosphate Accumulation. PMID:31907295
Polar recruitment of RLD by LAZY1-like protein during gravity signaling in root branch angle control. PMID:31900388
A novel Arabidopsis pathosystem reveals cooperation of multiple hormonal response-pathways in host resistance against the global crop destroyer Macrophomina phaseolina. PMID:31882671
CrRLK1L receptor-like kinases HERK1 and ANJEA are female determinants of pollen tube reception. PMID:31867824
Rapid Single-Step Affinity Purification of HA-Tagged Plant Mitochondria. PMID:31818904
CLE40 Signaling Regulates Root Stem Cell Fate. PMID:31806736
A Theophylline-Responsive Riboswitch Regulates Expression of Nuclear-Encoded Genes. PMID:31704721
Identification of the Arabidopsis Calmodulin-Dependent NAD+ Kinase That Sustains the Elicitor-Induced Oxidative Burst. PMID:31554701
Proline oxidation fuels mitochondrial respiration during dark-induced leaf senescence in Arabidopsis thaliana. PMID:31504781
The Copper Amine Oxidase AtCuAOδ Participates in Abscisic Acid-Induced Stomatal Closure in Arabidopsis. PMID:31226798
DEG10 contributes to mitochondrial proteostasis, root growth, and seed yield in Arabidopsis. PMID:31225599
A Label-free Mass Spectrometry Method to Predict Endogenous Protein Complex Composition. PMID:31186290
CEP3 levels affect starvation-related growth responses of the primary root. PMID:31173100
An Arabidopsis FANCJ helicase homologue is required for DNA crosslink repair and rDNA repeat stability. PMID:31120885
Asymmetric Redundancy of ZERZAUST and ZERZAUST HOMOLOG in Different Accessions of Arabidopsis thaliana. PMID:31113822
NPR1 Promotes Its Own and Target Gene Expression in Plant Defense by Recruiting CDK8. PMID:31110139
UVSSA, UBP12, and RDO2/TFIIS Contribute to Arabidopsis UV Tolerance. PMID:31105721
TPX2-LIKE PROTEIN3 Is the Primary Activator of α-Aurora Kinases and Is Essential for Embryogenesis. PMID:31097675
Agrobacterium-mediated plant transformation: biology and applications. PMID:31068763
CEP-CEPR1 signalling inhibits the sucrose-dependent enhancement of lateral root growth. PMID:31056646
RUBY, a Putative Galactose Oxidase, Influences Pectin Properties and Promotes Cell-To-Cell Adhesion in the Seed Coat Epidermis of Arabidopsis. PMID:30852555
AMP and GMP Catabolism in Arabidopsis Converge on Xanthosine, Which Is Degraded by a Nucleoside Hydrolase Heterocomplex. PMID:30787180
DOF2.1 Controls Cytokinin-Dependent Vascular Cell Proliferation Downstream of TMO5/LHW. PMID:30686737
PUMPKIN, the Sole Plastid UMP Kinase, Associates with Group II Introns and Alters Their Metabolism. PMID:30409856
Arabidopsis UMAMIT24 and 25 are amino acid exporters involved in seed loading. PMID:30312461
Glucose Uptake via STP Transporters Inhibits in Vitro Pollen Tube Growth in a HEXOKINASE1-Dependent Manner in Arabidopsis thaliana. PMID:30120167
Characterization of filament-forming CTP synthases from Arabidopsis thaliana. PMID:30030857
IRE1B degrades RNAs encoding proteins that interfere with the induction of autophagy by ER stress in Arabidopsis thaliana. PMID:29940799
The roles of Arabidopsis HSFA2, HSFA4a, and HSFA7a in the heat shock response and cytosolic protein response. PMID:29785454
Protoplast-Esculin Assay as a New Method to Assay Plant Sucrose Transporters: Characterization of AtSUC6 and AtSUC7 Sucrose Uptake Activity in Arabidopsis Col-0 Ecotype. PMID:29740457
Locus-specific control of the de novo DNA methylation pathway in Arabidopsis by the CLASSY family. PMID:29736015
Time-evolving genetic networks reveal a NAC troika that negatively regulates leaf senescence in Arabidopsis. PMID:29735710
FACT complex is required for DNA demethylation at heterochromatin during reproduction in Arabidopsis. PMID:29712855
Arabidopsis thaliana FANCD2 Promotes Meiotic Crossover Formation. PMID:29352063
Sugar Transporter STP7 Specificity for l-Arabinose and d-Xylose Contrasts with the Typical Hexose Transporters STP8 and STP12. PMID:29311272
Genome-wide association mapping in Arabidopsis identifies novel genes underlying quantitative disease resistance to Alternaria brassicae. PMID:29271603
Dihydrofolate Reductase/Thymidylate Synthase Fine-Tunes the Folate Status and Controls Redox Homeostasis in Plants. PMID:28939595
Role of CrRLK1L Cell Wall Sensors HERCULES1 and 2, THESEUS1, and FERONIA in Growth Adaptation Triggered by Heavy Metals and Trace Elements. PMID:28936224
The Arabidopsis LAZY1 Family Plays a Key Role in Gravity Signaling within Statocytes and in Branch Angle Control of Roots and Shoots. PMID:28765510
Triphosphate Tunnel Metalloenzyme Function in Senescence Highlights a Biological Diversification of This Protein Superfamily. PMID:28733390
Genomewide identification of genes involved in the potato response to drought indicates functional evolutionary conservation with Arabidopsis plants. PMID:28718511
3-Hydroxyisobutyrate Dehydrogenase Is Involved in Both, Valine and Isoleucine Degradation in Arabidopsis thaliana. PMID:28705827
ZHOUPI and KERBEROS Mediate Embryo/Endosperm Separation by Promoting the Formation of an Extracuticular Sheath at the Embryo Surface. PMID:28696222
PLATINUM SENSITIVE 2 LIKE impacts growth, root morphology, seed set, and stress responses. PMID:28678890
Light regulation of nitrate reductase by catalytic subunits of protein phosphatase 2A. PMID:28656346
Knowledge Discovery in Biological Databases for Revealing Candidate Genes Linked to Complex Phenotypes. PMID:28609292
The DnaJ-Like Zinc-Finger Protein HCF222 Is Required for Thylakoid Membrane Biogenesis in Plants. PMID:28572458
Identification of factors required for m6 A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI. PMID:28503769
The MBD7 complex promotes expression of methylated transgenes without significantly altering their methylation status. PMID:28452714
Genomic and Phenomic Screens for Flower Related RING Type Ubiquitin E3 Ligases in Arabidopsis. PMID:28400782
Evidence for GABA-Induced Systemic GABA Accumulation in Arabidopsis upon Wounding. PMID:28382046
Phosphatidylinositol 3-phosphate-binding protein AtPH1 controls the localization of the metal transporter NRAMP1 in Arabidopsis. PMID:28373552
EXO70C2 Is a Key Regulatory Factor for Optimal Tip Growth of Pollen. PMID:28356503
Selection of efficient Taq DNA polymerase to optimize T-DNA genotyping method for rapid detection of mutant Arabidopsis thaliana plants. PMID:28191385
Small One-Helix Proteins Are Essential for Photosynthesis in Arabidopsis. PMID:28167950
α2-COP is involved in early secretory traffic in Arabidopsis and is required for plant growth. PMID:28025315
Enhancing the GABI-Kat Arabidopsis thaliana T-DNA Insertion Mutant Database by Incorporating Araport11 Annotation. PMID:28013277
Transcriptomic and proteomic approach to identify differentially expressed genes and proteins in Arabidopsis thaliana mutants lacking chloroplastic 1 and cytosolic FBPases reveals several levels of metabolic regulation. PMID:27905870
Phosphorylation of MAP65-1 by Arabidopsis Aurora Kinases Is Required for Efficient Cell Cycle Progression. PMID:27879390
Variability in a Short Tandem Repeat Mediates Complex Epistatic Interactions in Arabidopsis thaliana. PMID:27866166
Methyl Transfer in Glucosinolate Biosynthesis Mediated by Indole Glucosinolate O-Methyltransferase 5. PMID:27810943
A Nitrogen-Fixing Subunit Essential for Accumulating 4Fe-4S-Containing Photosystem I Core Proteins. PMID:27784767
PCP-B class pollen coat proteins are key regulators of the hydration checkpoint in Arabidopsis thaliana pollen-stigma interactions. PMID:27596924
PIF4 and ELF3 Act Independently in Arabidopsis thaliana Thermoresponsive Flowering. PMID:27564448
Raffinose Family Oligosaccharides Act As Galactose Stores in Seeds and Are Required for Rapid Germination of Arabidopsis in the Dark. PMID:27507985
The plant-specific CDKB1-CYCB1 complex mediates homologous recombination repair in Arabidopsis. PMID:27497297
Phenotypes on demand via switchable target protein degradation in multicellular organisms. PMID:27447739
Of the Nine Cytidine Deaminase-Like Genes in Arabidopsis, Eight Are Pseudogenes and Only One Is Required to Maintain Pyrimidine Homeostasis in Vivo. PMID:27208239
Phenotypic and chemotypic studies using Arabidopsis and yeast reveal that GHB converts to SSA and induce toxicity. PMID:27037708
The plant natriuretic peptide receptor is a guanylyl cyclase and enables cGMP-dependent signaling. PMID:26945740
NCP1/AtMOB1A Plays Key Roles in Auxin-Mediated Arabidopsis Development. PMID:26942722
Lipid Droplet-Associated Proteins (LDAPs) Are Required for the Dynamic Regulation of Neutral Lipid Compartmentation in Plant Cells. PMID:26896396
Balancing of B6 Vitamers Is Essential for Plant Development and Metabolism in Arabidopsis. PMID:26858304
Xyloglucan Metabolism Differentially Impacts the Cell Wall Characteristics of the Endosperm and Embryo during Arabidopsis Seed Germination. PMID:26826221
MATE Transporter-Dependent Export of Hydroxycinnamic Acid Amides. PMID:26744218
Insect Herbivory-Elicited GABA Accumulation in Plants is a Wound-Induced, Direct, Systemic, and Jasmonate-Independent Defense Response. PMID:26734035
Job Sharing in the Endomembrane System: Vacuolar Acidification Requires the Combined Activity of V-ATPase and V-PPase. PMID:26589552
Identification of Arabidopsis GPAT9 (At5g60620) as an Essential Gene Involved in Triacylglycerol Biosynthesis. PMID:26586834
Protein S-Acyltransferase 14: A Specific Role for Palmitoylation in Leaf Senescence in Arabidopsis. PMID:26537563
The RNA helicase, eIF4A-1, is required for ovule development and cell size homeostasis in Arabidopsis. PMID:26493293
Modulation of Ambient Temperature-Dependent Flowering in Arabidopsis thaliana by Natural Variation of FLOWERING LOCUS M. PMID:26492483
Highly Branched Xylan Made by IRREGULAR XYLEM14 and MUCILAGE-RELATED21 Links Mucilage to Arabidopsis Seeds. PMID:26482889
High-throughput microanalysis of large lignocellulosic sample sets by pyrolysis-gas chromatography/mass spectrometry. PMID:26477543
The unified ICE-CBF pathway provides a transcriptional feedback control of freezing tolerance during cold acclimation in Arabidopsis. PMID:26311645
SnRK1-triggered switch of bZIP63 dimerization mediates the low-energy response in plants. PMID:26263501
A Repressor Protein Complex Regulates Leaf Growth in Arabidopsis. PMID:26232487
Genome-Wide Association Mapping of Fertility Reduction upon Heat Stress Reveals Developmental Stage-Specific QTLs in Arabidopsis thaliana. PMID:26163573
An unusual xylan in Arabidopsis primary cell walls is synthesised by GUX3, IRX9L, IRX10L and IRX14. PMID:26043357
PARP2 Is the Predominant Poly(ADP-Ribose) Polymerase in Arabidopsis DNA Damage and Immune Responses. PMID:25950582
Roles and programming of Arabidopsis ARGONAUTE proteins during Turnip mosaic virus infection. PMID:25806948
Arabidopsis glutaredoxin S17 and its partner, the nuclear factor Y subunit C11/negative cofactor 2α, contribute to maintenance of the shoot apical meristem under long-day photoperiod. PMID:25699589
Arabidopsis PIAL1 and 2 promote SUMO chain formation as E4-type SUMO ligases and are involved in stress responses and sulfur metabolism. PMID:25415977
An easy-to-use primer design tool to address paralogous loci and T-DNA insertion sites in the genome of Arabidopsis thaliana. PMID:25324895
Functional diversification of two UGT80 enzymes required for steryl glucoside synthesis in Arabidopsis. PMID:25316063
Characterization of Arabidopsis Tubby-like proteins and redundant function of AtTLP3 and AtTLP9 in plant response to ABA and osmotic stress. PMID:25168737
A plant-specific HUA2-LIKE (HULK) gene family in Arabidopsis thaliana is essential for development. PMID:25070081
Uric acid accumulation in an Arabidopsis urate oxidase mutant impairs seedling establishment by blocking peroxisome maintenance. PMID:25052714
Polycomb-Group Proteins and FLOWERING LOCUS T Maintain Commitment to Flowering in Arabidopsis thaliana. PMID:24920331
Update on transparent testa mutants from Arabidopsis thaliana: characterisation of new alleles from an isogenic collection. PMID:24903359
AtMYB93 is a novel negative regulator of lateral root development in Arabidopsis. PMID:24902892
Ribosomal Protein RPL27a Promotes Female Gametophyte Development in a Dose-Dependent Manner. PMID:24872379
Divergent functions of the Arabidopsis mitochondrial SCO proteins: HCC1 is essential for COX activity while HCC2 is involved in the UV-B stress response. PMID:24723925
A pathway for repair of NAD(P)H in plants. PMID:24706747
Linking gene expression and membrane lipid composition of Arabidopsis. PMID:24642935
Photoperiodic control of carbon distribution during the floral transition in Arabidopsis. PMID:24563199
The non-JAZ TIFY protein TIFY8 from Arabidopsis thaliana is a transcriptional repressor. PMID:24416306
Arabidopsis PECTIN METHYLESTERASEs contribute to immunity against Pseudomonas syringae. PMID:24367018
The evolutionarily conserved iron-sulfur protein INDH is required for complex I assembly and mitochondrial translation in Arabidopsis [corrected]. PMID:24179128
Plant purine nucleoside catabolism employs a guanosine deaminase required for the generation of xanthosine in Arabidopsis. PMID:24130159
Analysis of essential Arabidopsis nuclear genes encoding plastid-targeted proteins. PMID:24023856
Arabidopsis phospholipase dδ is involved in basal defense and nonhost resistance to powdery mildew fungi. PMID:23979971
WUSCHEL-responsive At5g65480 interacts with CLAVATA components in vitro and in transient expression. PMID:23776660
Extensive natural epigenetic variation at a de novo originated gene. PMID:23593031
The Arabidopsis CDK inhibitor ICK3/KRP5 is rate limiting for primary root growth and promotes growth through cell elongation and endoreduplication. PMID:23440171
Pectin biosynthesis: GALS1 in Arabidopsis thaliana is a β-1,4-galactan β-1,4-galactosyltransferase. PMID:23243126
Mutation of the cytosolic ribosomal protein-encoding RPS10B gene affects shoot meristematic function in Arabidopsis. PMID:22963533
AUX/LAX genes encode a family of auxin influx transporters that perform distinct functions during Arabidopsis development. PMID:22773749
The Arabidopsis ortholog of rice DWARF27 acts upstream of MAX1 in the control of plant development by strigolactones. PMID:22623516
ERF5 and ERF6 play redundant roles as positive regulators of JA/Et-mediated defense against Botrytis cinerea in Arabidopsis. PMID:22563431
MORC family ATPases required for heterochromatin condensation and gene silencing. PMID:22555433
The CHD3 remodeler PICKLE associates with genes enriched for trimethylation of histone H3 lysine 27. PMID:22452853
GABI-Kat SimpleSearch: an Arabidopsis thaliana T-DNA mutant database with detailed information for confirmed insertions PubMed citations: 29.

29 articles citing: GABI-Kat SimpleSearch: an Arabidopsis thaliana T-DNA mutant database with detailed information for confirmed insertions

Large scale genomic rearrangements in selected Arabidopsis thaliana T-DNA lines are caused by T-DNA insertion mutagenesis. PMID:34362298
Agrobacterium-mediated plant transformation: biology and applications. PMID:31068763
A Network-Guided Genetic Approach to Identify Novel Regulators of Adventitious Root Formation in Arabidopsis thaliana. PMID:31057574
Multi-omics Analysis Reveals Sequential Roles for ABA during Seed Maturation. PMID:30948555
A protein complex regulates RNA processing of intronic heterochromatin-containing genes in Arabidopsis. PMID:28808009
Enhancing the GABI-Kat Arabidopsis thaliana T-DNA Insertion Mutant Database by Incorporating Araport11 Annotation. PMID:28013277
An Indexed, Mapped Mutant Library Enables Reverse Genetics Studies of Biological Processes in Chlamydomonas reinhardtii. PMID:26764374
High-throughput generation of an activation-tagged mutant library for functional genomic analyses in tobacco. PMID:25408504
An easy-to-use primer design tool to address paralogous loci and T-DNA insertion sites in the genome of Arabidopsis thaliana. PMID:25324895
Mediation of clathrin-dependent trafficking during cytokinesis and cell expansion by Arabidopsis stomatal cytokinesis defective proteins. PMID:24179130
Analysis of the role of Arabidopsis class I TCP genes AtTCP7, AtTCP8, AtTCP22, and AtTCP23 in leaf development. PMID:24137171
Poly(ADP-ribose)polymerases are involved in microhomology mediated back-up non-homologous end joining in Arabidopsis thaliana. PMID:23625359
Functional Redundancy and Divergence within the Arabidopsis RETICULATA-RELATED Gene Family. PMID:23596191
Mutation of Arabidopsis spliceosomal timekeeper locus1 causes circadian clock defects. PMID:23110899
Impact of the absence of stem-specific β-glucosidases on lignin and monolignols. PMID:22984124
Histone H2B monoubiquitination facilitates the rapid modulation of gene expression during Arabidopsis photomorphogenesis. PMID:22829781
RNA-Seq analysis of developing nasturtium seeds (Tropaeolum majus): identification and characterization of an additional galactosyltransferase involved in xyloglucan biosynthesis. PMID:22474179
Web-based Arabidopsis functional and structural genomics resources. PMID:22303243
In the absence of BYPASS1-related gene function, the bps signal disrupts embryogenesis by an auxin-independent mechanism. PMID:22274700
GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database. PMID:22080561
Conserved CDC20 cell cycle functions are carried out by two of the five isoforms in Arabidopsis thaliana. PMID:21687678
Control of cell proliferation, organ growth, and DNA damage response operate independently of dephosphorylation of the Arabidopsis Cdk1 homolog CDKA;1. PMID:19948791
An archived activation tagged population of Arabidopsis thaliana to facilitate forward genetics approaches. PMID:19646253
Phenome analysis in plant species using loss-of-function and gain-of-function mutants. PMID:19502383
Arabidopsis Hormone Database: a comprehensive genetic and phenotypic information database for plant hormone research in Arabidopsis. PMID:19015126
Genes of the most conserved WOX clade in plants affect root and flower development in Arabidopsis. PMID:18950478
GabiPD: the GABI primary database--a plant integrative 'omics' database. PMID:18812395
The microRNA regulated SBP-box genes SPL9 and SPL15 control shoot maturation in Arabidopsis. PMID:18278578
Genome-wide analysis of T-DNA integration into the chromosomes of Magnaporthe oryzae. PMID:17850257
GABI-Kat SimpleSearch: a flanking sequence tag (FST) database for the identification of T-DNA insertion mutants in Arabidopsis thaliana PubMed citations: 27.

27 articles citing: GABI-Kat SimpleSearch: a flanking sequence tag (FST) database for the identification of T-DNA insertion mutants in Arabidopsis thaliana

Highly efficient heritable targeted deletions of gene clusters and non-coding regulatory regions in Arabidopsis using CRISPR/Cas9. PMID:29535386
Enhancing the GABI-Kat Arabidopsis thaliana T-DNA Insertion Mutant Database by Incorporating Araport11 Annotation. PMID:28013277
An easy-to-use primer design tool to address paralogous loci and T-DNA insertion sites in the genome of Arabidopsis thaliana. PMID:25324895
Arabidopsis thaliana RNase H2 deficiency counteracts the needs for the WEE1 checkpoint kinase but triggers genome instability. PMID:25217508
GPT2: a glucose 6-phosphate/phosphate translocator with a novel role in the regulation of sugar signalling during seedling development. PMID:24489010
Impact of the absence of stem-specific β-glucosidases on lignin and monolignols. PMID:22984124
FSTVAL: a new web tool to validate bulk flanking sequence tags. PMID:22709793
Arabidopsis CSP41 proteins form multimeric complexes that bind and stabilize distinct plastid transcripts. PMID:22090436
GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database. PMID:22080561
RiceFOX: a database of Arabidopsis mutant lines overexpressing rice full-length cDNA that contains a wide range of trait information to facilitate analysis of gene function. PMID:21186176
An archived activation tagged population of Arabidopsis thaliana to facilitate forward genetics approaches. PMID:19646253
SRA-domain proteins required for DRM2-mediated de novo DNA methylation. PMID:19043555
INCURVATA2 encodes the catalytic subunit of DNA Polymerase alpha and interacts with genes involved in chromatin-mediated cellular memory in Arabidopsis thaliana. PMID:17873092
A core subunit of the RNA-processing/degrading exosome specifically influences cuticular wax biosynthesis in Arabidopsis. PMID:17351114
Arabidopsis WEE1 kinase controls cell cycle arrest in response to activation of the DNA integrity checkpoint. PMID:17209125
The transcription factors WRKY11 and WRKY17 act as negative regulators of basal resistance in Arabidopsis thaliana. PMID:17114354
Arabidopsis reversibly glycosylated polypeptides 1 and 2 are essential for pollen development. PMID:17071651
GABI-Kat SimpleSearch: an Arabidopsis thaliana T-DNA mutant database with detailed information for confirmed insertions. PMID:17062622
ASYMMETRIC LEAVES2-LIKE1 gene, a member of the AS2/LOB family, controls proximal-distal patterning in Arabidopsis petals. PMID:15821980
The Arabidopsis plastidic glucose 6-phosphate/phosphate translocator GPT1 is essential for pollen maturation and embryo sac development. PMID:15722468
The Arabidopsis HOMOLOGY-DEPENDENT GENE SILENCING1 gene codes for an S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing. PMID:15659630
Site preferences of insertional mutagenesis agents in Arabidopsis. PMID:15618417
Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis. PMID:15269332
Arabidopsis thaliana DNA gyrase is targeted to chloroplasts and mitochondria. PMID:15136745
An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics. PMID:14756321
FLAGdb++: a database for the functional analysis of the Arabidopsis genome. PMID:14681431
Vacuolar sorting receptor for seed storage proteins in Arabidopsis thaliana. PMID:14657332
T-DNA-mediated transfer of Agrobacterium tumefaciens chromosomal DNA into plants PubMed citations: 19.

19 articles citing: T-DNA-mediated transfer of Agrobacterium tumefaciens chromosomal DNA into plants

Characterization of T-Circles and Their Formation Reveal Similarities to Agrobacterium T-DNA Integration Patterns. PMID:35599900
Maize Transformation: From Plant Material to the Release of Genetically Modified and Edited Varieties. PMID:34721493
Large scale genomic rearrangements in selected Arabidopsis thaliana T-DNA lines are caused by T-DNA insertion mutagenesis. PMID:34362298
Efficient CRISPR-mediated base editing in Agrobacterium spp. PMID:33443212
Widespread occurrence of natural genetic transformation of plants by Agrobacterium. PMID:31542868
Genetic Modification for Wheat Improvement: From Transgenesis to Genome Editing. PMID:30956982
Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination. PMID:28911330
An Insight into T-DNA Integration Events in Medicago sativa. PMID:28895894
Metagenomic-based impact study of transgenic grapevine rootstock on its associated virome and soil bacteriome. PMID:28544449
Efficient Construction of Large Genomic Deletion in Agrobacterium tumefaciens by Combination of Cre/loxP System and Triple Recombineering. PMID:26742770
Whole-genome analysis of herbicide-tolerant mutant rice generated by Agrobacterium-mediated gene targeting. PMID:25378689
A whole-genome analysis of a transgenic rice seed-based edible vaccine against cedar pollen allergy. PMID:23956243
Formation of complex extrachromosomal T-DNA structures in Agrobacterium tumefaciens-infected plants. PMID:22797657
Bacterial transposons are co-transferred with T-DNA to rice chromosomes during Agrobacterium-mediated transformation. PMID:22570148
Identification of virulence genes in the corn pathogen Colletotrichum graminicola by Agrobacterium tumefaciens-mediated transformation. PMID:21118348
Investigating Agrobacterium-mediated transformation of Verticillium albo-atrum on plant surfaces. PMID:21060684
An archived activation tagged population of Arabidopsis thaliana to facilitate forward genetics approaches. PMID:19646253
Agrobacterium in the genomics age. PMID:19439569
A protocol for efficiently retrieving and characterizing flanking sequence tags (FSTs) in Brachypodium distachyon T-DNA insertional mutants. PMID:19360020