Eukaryotic Linear Motifs
Names
More detailed information about this field from each metasource.
Eukaryotic Linear Motifs
metasource: Fairsharing.org
version: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
ELM
metasource: Fairsharing.org
version: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Names
More detailed information about this field from each metasource.
Eukaryotic Linear Motifs
metasource: Fairsharing.orgversion: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
ELM
metasource: Fairsharing.orgversion: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Names
More detailed information about this field from each metasource.
Eukaryotic Linear Motifs
metasource: Fairsharing.orgversion: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
ELM
metasource: Fairsharing.orgversion: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
This computational biology resource mainly focuses on annotation and detection of eukaryotic linear motifs (ELMs) by providing both a repository of annotated motif data and an exploratory tool for motif prediction. ELMs, or short linear motifs (SLiMs), are compact protein interaction sites composed of short stretches of adjacent amino acids.
Description
More detailed information about this field from each metasource.
This computational biology resource mainly focuses on annotation and detection of eukaryotic linear motifs (ELMs) by providing both a repository of annotated motif data and an exploratory tool for motif prediction. ELMs, or short linear motifs (SLiMs), are compact protein interaction sites composed of short stretches of adjacent amino acids.
metasource: Fairsharing.orgversion: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Short linear motifs (SLiMs) are protein binding modules that play major roles in almost all cellular processes. SLiMs are short, often highly degenerate, difficult to characterize and hard to detect. The eukaryotic linear motif (ELM) resource (elm.eu.org) is dedicated to SLiMs, consisting of a manually curated database of over 275 motif classes and over 3000 motif instances, and a pipeline to discover candidate SLiMs in protein sequences. For 15 years, ELM has been one of the major resources for motif research. In this database update, we present the latest additions to the database including 32 new motif classes, and new features including Uniprot and Reactome integration. Finally, to help provide cellular context, we present some biological insights about SLiMs in the cell cycle, as targets for bacterial pathogenicity and their functionality in the human kinome.
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Webpage:
http://elm.eu.orgWebpage
More detailed information about this field from each metasource.
http://elm.eu.org
metasource: Fairsharing.orgversion: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Licence:
Name: ELM Academic License AgreementLicence name
More detailed information about this field from each metasource.
ELM Academic License Agreement
metasource: Fairsharing.orgversion: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Licence URL
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http://elm.eu.org/media/Elm_academic_license.pdf
metasource: Fairsharing.orgversion: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins
PMID: 12824381
metasource: Fairsharing.org
version: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
ELM--the database of eukaryotic linear motifs
PMID: 22110040
metasource: Fairsharing.org
version: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
ELM 2016--data update and new functionality of the eukaryotic linear motif resource
PMID: 26615199
metasource: Fairsharing.org
version: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
http://dx.doi.org/10.1093/nar/gkx1077
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications
More detailed information about this field from each metasource.
ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins
PMID: 12824381
metasource: Fairsharing.org
version: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
ELM--the database of eukaryotic linear motifs
PMID: 22110040
metasource: Fairsharing.org
version: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
ELM 2016--data update and new functionality of the eukaryotic linear motif resource
PMID: 26615199
metasource: Fairsharing.org
version: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
http://dx.doi.org/10.1093/nar/gkx1077
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
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ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins
PubMed citations: 259.
259 articles citing: ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins
Expanding the clinical-pathological and genetic spectrum of RYR1-related congenital myopathies with cores and minicores: an Italian population study. PMID:35428369
Intrinsically disordered proteins play diverse roles in cell signaling. PMID:35177069
The Eukaryotic Linear Motif resource: 2022 release. PMID:34718738
Pathways to Parkinson's disease: a spotlight on 14-3-3 proteins. PMID:34548498
Glycoprotein non-metastatic melanoma protein B functions with growth factor signaling to induce tumorigenesis through its serine phosphorylation. PMID:34327762
Hierarchized phosphotarget binding by the seven human 14-3-3 isoforms. PMID:33723253
ODiNPred: comprehensive prediction of protein order and disorder. PMID:32901090
The ZIP6/ZIP10 heteromer is essential for the zinc-mediated trigger of mitosis. PMID:32797246
Structure and Dynamics in the ATG8 Family From Experimental to Computational Techniques. PMID:32587856
Post-translational modifications of Drosophila melanogaster HOX protein, Sex combs reduced. PMID:31931520
ELM-the eukaryotic linear motif resource in 2020. PMID:31680160
Protein phosphatase 2A regulates the nuclear accumulation of the Arabidopsis bZIP protein VIP1 under hypo-osmotic stress. PMID:31504762
Computational and experimental elucidation of Plasmodium falciparum phosphoethanolamine methyltransferase inhibitors: Pivotal drug target. PMID:31437171
Resources to Discover and Use Short Linear Motifs in Viral Proteins. PMID:31427097
Intrinsically disordered domains: Sequence ➔ disorder ➔ function relationships. PMID:31299122
Intrinsic Disorder-Based Emergence in Cellular Biology: Physiological and Pathological Liquid-Liquid Phase Transitions in Cells. PMID:31167414
Computational Prediction of MoRFs, Short Disorder-to-order Transitioning Protein Binding Regions. PMID:31007871
CoPhosK: A method for comprehensive kinase substrate annotation using co-phosphorylation analysis. PMID:30811403
A Wor1-Like Transcription Factor Is Essential for Virulence of Cryptococcus neoformans. PMID:30483479
A Methodological Assessment and Characterization of Genetically-Driven Variation in Three Human Phosphoproteomes. PMID:30108239
14-3-3 proteins in platelet biology and glycoprotein Ib-IX signaling. PMID:29622550
FoldX accurate structural protein-DNA binding prediction using PADA1 (Protein Assisted DNA Assembly 1). PMID:29608705
Computational modeling suggests impaired interactions between NKX2.5 and GATA4 in individuals carrying a novel pathogenic D16N NKX2.5 mutation. PMID:29568389
High-resolution global peptide-protein docking using fragments-based PIPER-FlexPepDock. PMID:29281622
The eukaryotic linear motif resource - 2018 update. PMID:29136216
PhosphoPredict: A bioinformatics tool for prediction of human kinase-specific phosphorylation substrates and sites by integrating heterogeneous feature selection. PMID:28761071
p38 MAPK signaling and phosphorylations in the BRCT1 domain regulate XRCC1 recruitment to sites of DNA damage. PMID:28740101
An Optimized Shotgun Strategy for the Rapid Generation of Comprehensive Human Proteomes. PMID:28601559
How disordered is my protein and what is its disorder for? A guide through the "dark side" of the protein universe. PMID:28232901
Cryptic sequence features within the disordered protein p27Kip1 regulate cell cycle signaling. PMID:27140628
The 14-3-3 protein PAR-5 regulates the asymmetric localization of the LET-99 spindle positioning protein. PMID:26921457
Computational analysis of prolyl hydroxylase domain-containing protein 2 (PHD2) mutations promoting polycythemia insurgence in humans. PMID:26754054
ELM 2016--data update and new functionality of the eukaryotic linear motif resource. PMID:26615199
Short linear motifs - ex nihilo evolution of protein regulation. PMID:26589632
Redefining the BH3 Death Domain as a 'Short Linear Motif'. PMID:26541461
Cutoff lensing: predicting catalytic sites in enzymes. PMID:26445900
A reverse-engineering approach to dissect post-translational modulators of transcription factor's activity from transcriptional data. PMID:26334955
Isoform-specific interactions of the von Hippel-Lindau tumor suppressor protein. PMID:26211615
Conserved Functional Motifs and Homology Modeling to Predict Hidden Moonlighting Functional Sites. PMID:26106597
Natural variability of minimotifs in 1092 people indicates that minimotifs are targets of evolution. PMID:26068475
Extreme multifunctional proteins identified from a human protein interaction network. PMID:26054620
ENHANCED DISEASE RESISTANCE4 associates with CLATHRIN HEAVY CHAIN2 and modulates plant immunity by regulating relocation of EDR1 in Arabidopsis. PMID:25747881
14-3-3-Pred: improved methods to predict 14-3-3-binding phosphopeptides. PMID:25735772
A hormone-responsive C1-domain-containing protein At5g17960 mediates stress response in Arabidopsis thaliana. PMID:25590629
Computational methods and opportunities for phosphorylation network medicine. PMID:25530950
INTEGRATING COMPUTATIONAL PROTEIN FUNCTION PREDICTION INTO DRUG DISCOVERY INITIATIVES. PMID:25530654
The dynamics of signal amplification by macromolecular assemblies for the control of chromosome segregation. PMID:25324779
The intrinsically disordered regions of the Drosophila melanogaster Hox protein ultrabithorax select interacting proteins based on partner topology. PMID:25286318
The development and application of a quantitative peptide microarray based approach to protein interaction domain specificity space. PMID:25135669
FGF10: Type III Epithelial Mesenchymal Transition and Invasion in Breast Cancer Cell Lines. PMID:25057305
Corolla is a novel protein that contributes to the architecture of the synaptonemal complex of Drosophila. PMID:24913682
CMT-associated mutations in glycyl- and tyrosyl-tRNA synthetases exhibit similar pattern of toxicity and share common genetic modifiers in Drosophila. PMID:24807208
Disordered proteinaceous machines. PMID:24702702
Proteolytic processing of the extracellular scaffolding protein LEV-9 is required for clustering acetylcholine receptors. PMID:24619422
Expression and bioinformatic analysis of lymphoma-associated novel gene KIAA0372. PMID:24557625
Proteomic analysis of glycine receptor β subunit (GlyRβ)-interacting proteins: evidence for syndapin I regulating synaptic glycine receptors. PMID:24509844
Cyclin G2 promotes hypoxia-driven local invasion of glioblastoma by orchestrating cytoskeletal dynamics. PMID:24339739
The eukaryotic linear motif resource ELM: 10 years and counting. PMID:24214962
SeqNLS: nuclear localization signal prediction based on frequent pattern mining and linear motif scoring. PMID:24204689
The Campylobacter jejuni CiaD effector protein activates MAP kinase signaling pathways and is required for the development of disease. PMID:24144181
High expression of MACC1 predicts poor prognosis in patients with osteosarcoma. PMID:24065195
Predicting binding within disordered protein regions to structurally characterised peptide-binding domains. PMID:24019881
Towards a better understanding of the novel avian-origin H7N9 influenza A virus in China. PMID:23897131
The candidate histocompatibility locus of a Basal chordate encodes two highly polymorphic proteins. PMID:23826085
TCTEX1D4, a novel protein phosphatase 1 interactor: connecting the phosphatase to the microtubule network. PMID:23789093
Characterization of 14-3-3-ζ Interactions with integrin tails. PMID:23763993
Rad53 homologue forkhead-associated kinase A (FhkA) and Ca2+-binding protein 4a (CBP4a) are nucleolar proteins that differentially redistribute during mitosis in Dictyostelium. PMID:23587254
Comparative domain modeling of human EGF-like module EMR2 and study of interaction of the fourth domain of EGF with chondroitin 4-sulphate. PMID:23554678
Regulation of presynaptic anchoring of the scaffold protein Bassoon by phosphorylation-dependent interaction with 14-3-3 adaptor proteins. PMID:23516560
Exploring the binding diversity of intrinsically disordered proteins involved in one-to-many binding. PMID:23233352
Putative SF2 helicases of the early-branching eukaryote Giardia lamblia are involved in antigenic variation and parasite differentiation into cysts. PMID:23190735
Achieving high accuracy prediction of minimotifs. PMID:23029121
The rust transferred proteins-a new family of effector proteins exhibiting protease inhibitor function. PMID:22998218
Navigating cancer network attractors for tumor-specific therapy. PMID:22965061
Intrinsic disorder in the human spliceosomal proteome. PMID:22912569
The mate recognition protein gene mediates reproductive isolation and speciation in the Brachionus plicatilis cryptic species complex. PMID:22852831
Computational modeling of the bHLH domain of the transcription factor TWIST1 and R118C, S144R and K145E mutants. PMID:22839202
The expression of Delta ligands in the sponge Amphimedon queenslandica suggests an ancient role for Notch signaling in metazoan development. PMID:22824137
MoRFpred, a computational tool for sequence-based prediction and characterization of short disorder-to-order transitioning binding regions in proteins. PMID:22689782
Interactions of an Arabidopsis RanBPM homologue with LisH-CTLH domain proteins revealed high conservation of CTLH complexes in eukaryotes. PMID:22676313
High-throughput analysis of peptide-binding modules. PMID:22610655
3D profile-based approach to proteome-wide discovery of novel human chemokines. PMID:22586462
Cardiomyopathy in patients with POMT1-related congenital and limb-girdle muscular dystrophy. PMID:22549409
Network evolution: rewiring and signatures of conservation in signaling. PMID:22438796
Reducing false-positive prediction of minimotifs with a genetic interaction filter. PMID:22403687
The cell adhesion molecule neuroplastin-65 is a novel interaction partner of γ-aminobutyric acid type A receptors. PMID:22389504
Knockdown of ZNF403 inhibits cell proliferation and induces G2/M arrest by modulating cell-cycle mediators. PMID:22350815
Protein kinase CK2 triggers cytosolic zinc signaling pathways by phosphorylation of zinc channel ZIP7. PMID:22317921
Phosphosite mapping of P-type plasma membrane H+-ATPase in homologous and heterologous environments. PMID:22174420
Characterization and expression of attacin, an antibacterial protein-encoding gene, from the beet armyworm, Spodoptera exigua (Hübner) (Insecta: Lepidoptera: Noctuidae). PMID:22160467
Identification of functionally distinct TRAF proinflammatory and phosphatidylinositol 3-kinase/mitogen-activated protein kinase/extracellular signal-regulated kinase kinase (PI3K/MEK) transforming activities emanating from RET/PTC fusion oncoprotein. PMID:22158616
Minimotif Miner 3.0: database expansion and significantly improved reduction of false-positive predictions from consensus sequences. PMID:22146221
ELM--the database of eukaryotic linear motifs. PMID:22110040
Multi-tasking role of the mechanosensing protein Ankrd2 in the signaling network of striated muscle. PMID:22016770
Identification of RhoGAP22 as an Akt-dependent regulator of cell motility in response to insulin. PMID:21969604
Arabidopsis RTNLB1 and RTNLB2 Reticulon-like proteins regulate intracellular trafficking and activity of the FLS2 immune receptor. PMID:21949153
Predicting protein kinase specificity: Predikin update and performance in the DREAM4 challenge. PMID:21829434
Sequence- and interactome-based prediction of viral protein hotspots targeting host proteins: a case study for HIV Nef. PMID:21738584
Coronavirus gene 7 counteracts host defenses and modulates virus virulence. PMID:21695242
Mouse transmembrane BAX inhibitor motif 3 (Tmbim3) encodes a 38 kDa transmembrane protein expressed in the central nervous system. PMID:21614515
Extraction of consensus protein patterns in regions containing non-proline cis peptide bonds and their functional assessment. PMID:21569261
Idas, a novel phylogenetically conserved geminin-related protein, binds to geminin and is required for cell cycle progression. PMID:21543332
Sequence variation in the herpes simplex virus U(S)1 ocular virulence determinant. PMID:21519032
Active participation of cellular chaperone Hsp90 in regulating the function of rotavirus nonstructural protein 3 (NSP3). PMID:21489987
The Bphi008a gene interacts with the ethylene pathway and transcriptionally regulates MAPK genes in the response of rice to brown planthopper feeding. PMID:21487048
Pattern recognition scavenger receptor CD204 attenuates Toll-like receptor 4-induced NF-kappaB activation by directly inhibiting ubiquitination of tumor necrosis factor (TNF) receptor-associated factor 6. PMID:21460221
Identification of contractile vacuole proteins in Trypanosoma cruzi. PMID:21437209
STK35L1 associates with nuclear actin and regulates cell cycle and migration of endothelial cells. PMID:21283756
Large-scale discovery and characterization of protein regulatory motifs in eukaryotes. PMID:21206902
Histidine domain-protein tyrosine phosphatase interacts with Grb2 and GrpL. PMID:21179510
Feature amplified voting algorithm for functional analysis of protein superfamily. PMID:21143781
Interaction of calmodulin with Sec61α limits Ca2+ leakage from the endoplasmic reticulum. PMID:21102557
Human thymidylate synthase with loop 181-197 stabilized in an inactive conformation: ligand interactions, phosphorylation, and inhibition profiles. PMID:21064161
Prediction of functional engrailed homology-1 protein motif from sequence. PMID:20975914
Toward a complete in silico, multi-layered embryonic stem cell regulatory network. PMID:20890967
Partitioning of minimotifs based on function with improved prediction accuracy. PMID:20808856
Distinct class of DNA-binding domains is exemplified by a master regulator of phenotypic switching in Candida albicans. PMID:20660774
MimoSA: a system for minimotif annotation. PMID:20565705
Novel peptide-mediated interactions derived from high-resolution 3-dimensional structures. PMID:20502673
SPA: Short peptide analyzer of intrinsic disorder status of short peptides. PMID:20497238
MOTIPS: automated motif analysis for predicting targets of modular protein domains. PMID:20459839
Real-time ligand binding pocket database search using local surface descriptors. PMID:20455259
AMS 3.0: prediction of post-translational modifications. PMID:20423529
Protein kinase A phosphorylation activates Vpr-induced cell cycle arrest during human immunodeficiency virus type 1 infection. PMID:20392842
Genetics and pathological mechanisms of Usher syndrome. PMID:20379205
Arabidopsis thaliana GYRB3 does not encode a DNA gyrase subunit. PMID:20360860
Novel mode of phosphorylation-triggered reorganization of the nuclear lamina during nuclear egress of human cytomegalovirus. PMID:20202933
Sequence alignment reveals possible MAPK docking motifs on HIV proteins. PMID:20126615
BayesMotif: de novo protein sorting motif discovery from impure datasets. PMID:20122242
Understanding protein non-folding. PMID:20117254
Evidence for a protein tether involved in somatic touch. PMID:20075867
Estimation and efficient computation of the true probability of recurrence of short linear protein sequence motifs in unrelated proteins. PMID:20055997
Global phosphoproteomics identifies a major role for AKT and 14-3-3 in regulating EDC3. PMID:20051463
Phosphorylation of S776 and 14-3-3 binding modulate ataxin-1 interaction with splicing factors. PMID:20037628
Expression-based network biology identifies alteration in key regulatory pathways of type 2 diabetes and associated risk/complications. PMID:19997558
ELM: the status of the 2010 eukaryotic linear motif resource. PMID:19920119
Reovirus nonstructural protein sigma1s is required for establishment of viremia and systemic dissemination. PMID:19897716
The Arabidopsis tandem zinc finger protein AtTZF1 traffics between the nucleus and cytoplasmic foci and binds both DNA and RNA. PMID:19897605
Implication of serine residues 271, 273, and 275 in the human immunodeficiency virus type 1 cofactor activity of lens epithelium-derived growth factor/p75. PMID:19889764
PepX: a structural database of non-redundant protein-peptide complexes. PMID:19880386
Consortin, a trans-Golgi network cargo receptor for the plasma membrane targeting and recycling of connexins. PMID:19864490
A structure filter for the Eukaryotic Linear Motif Resource. PMID:19852836
MACC1 - more than metastasis? Facts and predictions about a novel gene. PMID:19787327
Consequences for enamel development and mineralization resulting from loss of function of ameloblastin or enamelin. PMID:19758243
Comparison of structure-based and threading-based approaches to protein functional annotation. PMID:19731377
ANCHOR: web server for predicting protein binding regions in disordered proteins. PMID:19717576
A proposed syntax for Minimotif Semantics, version 1. PMID:19656396
Novel ENU-induced point mutation in scavenger receptor class B, member 1, results in liver specific loss of SCARB1 protein. PMID:19654867
Host sequence motifs shared by HIV predict response to antiretroviral therapy. PMID:19627600
Nucleocytoplasmic shuttling of the TACC protein Mia1p/Alp7p is required for remodeling of microtubule arrays during the cell cycle. PMID:19606211
Evidence for the concerted evolution between short linear protein motifs and their flanking regions. PMID:19584925
The importance of being flexible: the case of basic region leucine zipper transcriptional regulators. PMID:19519454
seeMotif: exploring and visualizing sequence motifs in 3D structures. PMID:19477961
Bioinformatics resources for cancer research with an emphasis on gene function and structure prediction tools. PMID:19458756
Influenza A virus NS1 targets the ubiquitin ligase TRIM25 to evade recognition by the host viral RNA sensor RIG-I. PMID:19454348
Prediction of HIV-1 virus-host protein interactions using virus and host sequence motifs. PMID:19450270
Prolectin, a glycan-binding receptor on dividing B cells in germinal centers. PMID:19419970
Prediction of protein binding regions in disordered proteins. PMID:19412530
An integrin-alpha4-14-3-3zeta-paxillin ternary complex mediates localised Cdc42 activity and accelerates cell migration. PMID:19401330
Knockdown of human N alpha-terminal acetyltransferase complex C leads to p53-dependent apoptosis and aberrant human Arl8b localization. PMID:19398576
Comparative profiling identifies C13orf3 as a component of the Ska complex required for mammalian cell division. PMID:19387489
Serine palmitoyltransferase subunit 1 is present in the endoplasmic reticulum, nucleus and focal adhesions, and functions in cell morphology. PMID:19362163
The phosphoproteome of bloodstream form Trypanosoma brucei, causative agent of African sleeping sickness. PMID:19346560
Accurate prediction of peptide binding sites on protein surfaces. PMID:19325869
The protein Nalpha-terminal acetyltransferase hNaa10p (hArd1) is phosphorylated in HEK293 cells. PMID:19284711
Structural conservation of a short, functional, peptide-sequence motif. PMID:19273121
Diversity of polyproline recognition by EVH1 domains. PMID:19273103
Prediction of interactions between HIV-1 and human proteins by information integration. PMID:19209727
Improved disorder prediction by combination of orthogonal approaches. PMID:19209228
Dynamic modularity in protein interaction networks predicts breast cancer outcome. PMID:19182785
Functional genomics in zebrafish permits rapid characterization of novel platelet membrane proteins. PMID:19109564
Phosphorylation regulates SIRT1 function. PMID:19107194
A class III PDZ binding motif in the myotilin and FATZ families binds enigma family proteins: a common link for Z-disc myopathies. PMID:19047374
KEPE--a motif frequently superimposed on sumoylation sites in metazoan chromatin proteins and transcription factors. PMID:19033273
Shigella flexneri type III secretion system effectors OspB and OspF target the nucleus to downregulate the host inflammatory response via interactions with retinoblastoma protein. PMID:19017275
Minimotif miner 2nd release: a database and web system for motif search. PMID:18978024
The rough guide to in silico function prediction, or how to use sequence and structure information to predict protein function. PMID:18974821
3did Update: domain-domain and peptide-mediated interactions of known 3D structure. PMID:18953040
Short Linear Motifs recognized by SH2, SH3 and Ser/Thr Kinase domains are conserved in disordered protein regions. PMID:18831792
MeDor: a metaserver for predicting protein disorder. PMID:18831791
The unfoldomics decade: an update on intrinsically disordered proteins. PMID:18831774
The conservation pattern of short linear motifs is highly correlated with the function of interacting protein domains. PMID:18828911
Structural and functional divergence of two fish aquaporin-1 water channels following teleost-specific gene duplication. PMID:18811940
In vivo genetic mutations define predominant functions of the human T-cell leukemia/lymphoma virus p12I protein. PMID:18791162
Linear motif atlas for phosphorylation-dependent signaling. PMID:18765831
A protein domain-based interactome network for C. elegans early embryogenesis. PMID:18692475
Experience using web services for biological sequence analysis. PMID:18621748
Contextual specificity in peptide-mediated protein interactions. PMID:18596940
Cloning and characterization of novel human SLC4A8 gene products encoding Na+-driven Cl-/HCO3(-) exchanger variants NDCBE-A, -C, and -D. PMID:18577713
Modular organization and combinatorial energetics of proline-tyrosine nuclear localization signals. PMID:18532879
E1DS: catalytic site prediction based on 1D signatures of concurrent conservation. PMID:18524800
Viral infection and human disease--insights from minimotifs. PMID:18508672
Cell-surface nucleolin is a signal transducing P-selectin binding protein for human colon carcinoma cells. PMID:18504038
Evidence for a novel role for dachshund in patterning the proximal arthropod leg. PMID:18483814
GPS 2.0, a tool to predict kinase-specific phosphorylation sites in hierarchy. PMID:18463090
A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences. PMID:18460207
Biophysical characterization of the unstructured cytoplasmic domain of the human neuronal adhesion protein neuroligin 3. PMID:18456828
A new protein linear motif benchmark for multiple sequence alignment software. PMID:18439277
Discovering sequence motifs with arbitrary insertions and deletions. PMID:18437229
Semidominant mutations in reduced epidermal fluorescence 4 reduce phenylpropanoid content in Arabidopsis. PMID:18430946
FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures. PMID:18387204
Distinct regions of ATF/CREB proteins Atf1 and Pcr1 control recombination hotspot ade6-M26 and the osmotic stress response. PMID:18375981
Flexible nets: disorder and induced fit in the associations of p53 and 14-3-3 with their partners. PMID:18366598
Genome-wide inference of protein interaction sites: lessons from the yeast high-quality negative protein-protein interaction dataset. PMID:18281313
The expression and bioinformatic analysis of a novel gene C20orf14 associated with lymphoma. PMID:18278469
Dual control of nuclear EIN3 by bifurcate MAPK cascades in C2H4 signalling. PMID:18273012
Phosphorylation of human Jak3 at tyrosines 904 and 939 positively regulates its activity. PMID:18250158
Biochemical and structural characterization of apolipoprotein A-I binding protein, a novel phosphoprotein with a potential role in sperm capacitation. PMID:18202122
NestedMICA as an ab initio protein motif discovery tool. PMID:18194537
PepCyber:P~PEP: a database of human protein protein interactions mediated by phosphoprotein-binding domains. PMID:18160410
Novel isoforms of intracellular platelet activating factor acetylhydrolase (PAFAH1b2) in human testis; encoded by alternatively spliced mRNAs. PMID:18155631
AutoMotif Server for prediction of phosphorylation sites in proteins using support vector machine: 2007 update. PMID:17994256
Genome-wide annotation of remorins, a plant-specific protein family: evolutionary and functional perspectives. PMID:17984200
Mining alpha-helix-forming molecular recognition features with cross species sequence alignments. PMID:17973494
Phospho.ELM: a database of phosphorylation sites--update 2008. PMID:17962309
Developmental expression and differentiation-related neuron-specific splicing of metastasis suppressor 1 (Mtss1) in normal and transformed cerebellar cells. PMID:17925019
Structural disorder promotes assembly of protein complexes. PMID:17922903
SLiMFinder: a probabilistic method for identifying over-represented, convergently evolved, short linear motifs in proteins. PMID:17912346
Mass spectroscopic phosphoprotein mapping of Ral binding protein 1 (RalBP1/Rip1/RLIP76). PMID:17706599
Predicting active site residue annotations in the Pfam database. PMID:17688688
Prediction of cyclin-dependent kinase phosphorylation substrates. PMID:17668044
The intracellular region of Notch ligands: does the tail make the difference? PMID:17623096
Molecular evolution of hemojuvelin and the repulsive guidance molecule family. PMID:17593421
Web services at the European bioinformatics institute. PMID:17576686
The SLiMDisc server: short, linear motif discovery in proteins. PMID:17576682
Systematic discovery of in vivo phosphorylation networks. PMID:17570479
Chicken CD69 and CD94/NKG2-like genes in a chromosomal region syntenic to mammalian natural killer gene complex. PMID:17505822
Secreted gliomedin is a perinodal matrix component of peripheral nerves. PMID:17485493
False occurrences of functional motifs in protein sequences highlight evolutionary constraints. PMID:17331242
Clustering of phosphorylation site recognition motifs can be exploited to predict the targets of cyclin-dependent kinase. PMID:17316440
Mutations in STRA6 cause a broad spectrum of malformations including anophthalmia, congenital heart defects, diaphragmatic hernia, alveolar capillary dysplasia, lung hypoplasia, and mental retardation. PMID:17273977
Intrinsic disorder and functional proteomics. PMID:17158572
DisProt: the Database of Disordered Proteins. PMID:17145717
Phospho3D: a database of three-dimensional structures of protein phosphorylation sites. PMID:17142231
A correlated motif approach for finding short linear motifs from protein interaction networks. PMID:17107624
Identification of two novel mutations and of a novel critical region in the KRIT1 gene. PMID:17043900
Identification of a 709-amino-acid internal nonessential region within the essential conserved tegument protein (p)UL36 of pseudorabies virus. PMID:16973597
Cataloging the relationships between proteins: a review of interaction databases. PMID:16943573
Sequence analysis and transcriptional profiling of two vacuolar H+ -pyrophosphatase isoforms in Vitis vinifera. PMID:16924561
SLiMDisc: short, linear motif discovery, correcting for common evolutionary descent. PMID:16855291
New members of the neurexin superfamily: multiple rodent homologues of the human CASPR5 gene. PMID:16845472
DILIMOT: discovery of linear motifs in proteins. PMID:16845024
Automatic discovery of cross-family sequence features associated with protein function. PMID:16409628
HIF-1alpha and iNOS levels in crucian carp gills during hypoxia-induced transformation. PMID:16362306
Support-vector-machine classification of linear functional motifs in proteins. PMID:16341901
Isolation and characterization of a protochordate histocompatibility locus. PMID:16306984
Systematic discovery of new recognition peptides mediating protein interaction networks. PMID:16279839
Interaction of heterochromatin protein 2 with HP1 defines a novel HP1-binding domain. PMID:16201764
Identification of the surfactant protein A receptor 210 as the unconventional myosin 18A. PMID:16087679
Functional annotation by identification of local surface similarities: a novel tool for structural genomics. PMID:16076399
Creation and disruption of protein features by alternative splicing -- a novel mechanism to modulate function. PMID:15998447
MINER: software for phylogenetic motif identification. PMID:15980467
QuasiMotiFinder: protein annotation by searching for evolutionarily conserved motif-like patterns. PMID:15980465
Predicting functional sites with an automated algorithm suitable for heterogeneous datasets. PMID:15890082
Phospho.ELM: a database of experimentally verified phosphorylation sites in eukaryotic proteins. PMID:15212693
SURFACE: a database of protein surface regions for functional annotation. PMID:14681403
SIRW: A web server for the Simple Indexing and Retrieval System that combines sequence motif searches with keyword searches. PMID:12824415
GlobPlot: Exploring protein sequences for globularity and disorder. PMID:12824398
LOC3D: annotate sub-cellular localization for protein structures. PMID:12824321 -
ELM--the database of eukaryotic linear motifs
PubMed citations: 167.
167 articles citing: ELM--the database of eukaryotic linear motifs
The CIP2A-TOPBP1 complex safeguards chromosomal stability during mitosis. PMID:35842428
C-Jun N-Terminal Kinase Post-Translational Regulation of Pain-Related Acid-Sensing Ion Channels 1b and 3. PMID:34380759
The 28 Ser Amino Acid of Cucumber Mosaic Virus Movement Protein Has a Role in Symptom Formation and Plasmodesmata Localization. PMID:33572676
Late p65 nuclear translocation in glioblastoma cells indicates non-canonical TLR4 signaling and activation of DNA repair genes. PMID:33446690
Mutation of CFAP57, a protein required for the asymmetric targeting of a subset of inner dynein arms in Chlamydomonas, causes primary ciliary dyskinesia. PMID:32764743
The search of sequence variants using a constrained protein evolution simulation approach. PMID:32695271
SARS-CoV-2 (COVID-19) structural and evolutionary dynamicome: Insights into functional evolution and human genomics. PMID:32587094
Early Metazoan Origin and Multiple Losses of a Novel Clade of RIM Presynaptic Calcium Channel Scaffolding Protein Homologs. PMID:32413100
Dynamic conformational flexibility and molecular interactions of intrinsically disordered proteins. PMID:32020911
Post-translational modifications of Drosophila melanogaster HOX protein, Sex combs reduced. PMID:31931520
Biophysical prediction of protein-peptide interactions and signaling networks using machine learning. PMID:31907444
Understanding the penetrance of intrinsic protein disorder in rotavirus proteome. PMID:31739058
ELM-the eukaryotic linear motif resource in 2020. PMID:31680160
Subcellular Localization Signals of bHLH-PAS Proteins: Their Significance, Current State of Knowledge and Future Perspectives. PMID:31554340
Protein Abundance Biases the Amino Acid Composition of Disordered Regions to Minimize Non-functional Interactions. PMID:31442477
The carboxy-terminus, a key regulator of protein function. PMID:31106589
Characterization of putative proteins encoded by variable ORFs in white spot syndrome virus genome. PMID:30999895
Identification of a Novel Deltavirus in Boa Constrictors. PMID:30940697
Probabilistic variable-length segmentation of protein sequences for discriminative motif discovery (DiMotif) and sequence embedding (ProtVecX). PMID:30837494
A resource of variant effect predictions of single nucleotide variants in model organisms. PMID:30573687
Characterization of Haartman Institute snake virus-1 (HISV-1) and HISV-like viruses-The representatives of genus Hartmanivirus, family Arenaviridae. PMID:30427944
Firefly genomes illuminate parallel origins of bioluminescence in beetles. PMID:30324905
The C-terminus of varicella-zoster virus glycoprotein M contains trafficking motifs that mediate skin virulence in the SCID-human model of VZV pathogenesis. PMID:30119012
Computational Methods for Predicting Protein-Protein Interactions Using Various Protein Features. PMID:29927082
The SRC-family tyrosine kinase HCK shapes the landscape of SKAP2 interactome. PMID:29568343
Long disordered regions of the C-terminal domain of Abelson tyrosine kinase have specific and additive functions in regulation and axon localization. PMID:29232713
Minimotif Miner 4: a million peptide minimotifs and counting. PMID:29140456
The eukaryotic linear motif resource - 2018 update. PMID:29136216
Perturbed human sub-networks by Fusobacterium nucleatum candidate virulence proteins. PMID:28793925
Therapeutic Interventions of Cancers Using Intrinsically Disordered Proteins as Drug Targets: c-Myc as Model System. PMID:28469390
HH-MOTiF: de novo detection of short linear motifs in proteins by Hidden Markov Model comparisons. PMID:28460141
Exhaustive search of linear information encoding protein-peptide recognition. PMID:28426660
SLiMSearch: a framework for proteome-wide discovery and annotation of functional modules in intrinsically disordered regions. PMID:28387819
Systematic identification of phosphorylation-mediated protein interaction switches. PMID:28346509
Prediction of virus-host protein-protein interactions mediated by short linear motifs. PMID:28279163
Identification of Entry Factors Involved in Hepatitis C Virus Infection Based on Host-Mimicking Short Linear Motifs. PMID:28129350
ARA-PEPs: a repository of putative sORF-encoded peptides in Arabidopsis thaliana. PMID:28095775
Evolution of bopA Gene in Burkholderia: A Case of Convergent Evolution as a Mechanism for Bacterial Autophagy Evasion. PMID:28018913
Overlapping Regions in HIV-1 Genome Act as Potential Sites for Host-Virus Interaction. PMID:27867372
Germline and somatic mutations in the MTOR gene in focal cortical dysplasia and epilepsy. PMID:27830187
Evolution of Protein Domain Repeats in Metazoa. PMID:27671125
Adaptive patterns in the p53 protein sequence of the hypoxia- and cancer-tolerant blind mole rat Spalax. PMID:27590526
Computational analysis of translational readthrough proteins in Drosophila and yeast reveals parallels to alternative splicing. PMID:27561673
Conformational flexibility of BECN1: Essential to its key role in autophagy and beyond. PMID:27414988
MSX1 mutations and associated disease phenotypes: genotype-phenotype relations. PMID:27381090
Reconstruction of the High-Osmolarity Glycerol (HOG) Signaling Pathway from the Halophilic Fungus Wallemia ichthyophaga in Saccharomyces cerevisiae. PMID:27379041
A WDR Gene Is a Conserved Member of a Chitin Synthase Gene Cluster and Influences the Cell Wall in Aspergillus nidulans. PMID:27367684
Evolution of domain-peptide interactions to coadapt specificity and affinity to functional diversity. PMID:27317745
Proteome-wide search for functional motifs altered in tumors: Prediction of nuclear export signals inactivated by cancer-related mutations. PMID:27174732
Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing. PMID:26871637
The Genomes of Three Uneven Siblings: Footprints of the Lifestyles of Three Trichoderma Species. PMID:26864432
The phenotypic impact of the male-specific region of chromosome-Y in inbred mating: the role of genetic variants and gene duplications in multiple inbred rat strains. PMID:26848384
ELM 2016--data update and new functionality of the eukaryotic linear motif resource. PMID:26615199
Redefining the BH3 Death Domain as a 'Short Linear Motif'. PMID:26541461
Interpreting functional effects of coding variants: challenges in proteome-scale prediction, annotation and assessment. PMID:26494363
C5orf30 is a negative regulator of tissue damage in rheumatoid arthritis. PMID:26316022
High-throughput methods for identification of protein-protein interactions involving short linear motifs. PMID:26297553
Identification and Characterization of a Novel Family of Cysteine-Rich Peptides (MgCRP-I) from Mytilus galloprovincialis. PMID:26201648
Mapping of the Sequences Directing Localization of the Drosophila Germ Cell-Expressed Protein (GCE). PMID:26186223
Human ortholog of Drosophila Melted impedes SMAD2 release from TGF-β receptor I to inhibit TGF-β signaling. PMID:26039994
hMENA(11a) contributes to HER3-mediated resistance to PI3K inhibitors in HER2-overexpressing breast cancer cells. PMID:25961924
Functional Characterization of Nupr1L, A Novel p53-Regulated Isoform of the High-Mobility Group (HMG)-Related Protumoral Protein Nupr1. PMID:25899918
Systematic identification of cancer driving signaling pathways based on mutual exclusivity of genomic alterations. PMID:25887147
Identification and fine mapping of nuclear and nucleolar localization signals within the human ribosomal protein S17. PMID:25853866
The MS4A family: counting past 1, 2 and 3. PMID:25835430
QSLiMFinder: improved short linear motif prediction using specific query protein data. PMID:25792551
LocSigDB: a database of protein localization signals. PMID:25725059
A recently evolved isoform of the transcription factor BES1 promotes brassinosteroid signaling and development in Arabidopsis thaliana. PMID:25649439
Functional characterization of nuclear trafficking signals in pseudorabies virus pUL31. PMID:25505082
A cancer-associated mutation inactivates a region of the high-mobility group protein HMG20b essential for cytokinesis. PMID:25486196
Growth signals employ CGGBP1 to suppress transcription of Alu-SINEs. PMID:25483050
Comparative genomic analysis of slc39a12/ZIP12: insight into a zinc transporter required for vertebrate nervous system development. PMID:25375179
Species differences in cannabinoid receptor 2 and receptor responses to cocaine self-administration in mice and rats. PMID:25374096
The PXDLS linear motif regulates circadian rhythmicity through protein-protein interactions. PMID:25260595
Cooperative structure of the heterotrimeric pre-mRNA retention and splicing complex. PMID:25218446
Investigating the molecular basis of Siah1 and Siah2 E3 ubiquitin ligase substrate specificity. PMID:25202994
Crystal structure of the WOPR-DNA complex and implications for Wor1 function in white-opaque switching of Candida albicans. PMID:25091450
Evidence supporting the existence of a NUPR1-like family of helix-loop-helix chromatin proteins related to, yet distinct from, AT hook-containing HMG proteins. PMID:25056123
Functional characterization of G-protein-coupled receptors: a bioinformatics approach. PMID:24997265
The calcineurin signaling network evolves via conserved kinase-phosphatase modules that transcend substrate identity. PMID:24930733
Discovery and characterization of distinct simian pegiviruses in three wild African Old World monkey species. PMID:24918769
Use of host-like peptide motifs in viral proteins is a prevalent strategy in host-virus interactions. PMID:24882001
Intrinsic disorder in the BK channel and its interactome. PMID:24727949
DoReMi: context-based prioritization of linear motif matches. PMID:24711967
Research resource: EPSLiM: ensemble predictor for short linear motifs in nuclear hormone receptors. PMID:24678734
TCTEX1D4 interactome in human testis: unraveling the function of dynein light chain in spermatozoa. PMID:24606217
Prediction of protein interaction types based on sequence and network features. PMID:24564924
Large-scale interaction profiling of PDZ domains through proteomic peptide-phage display using human and viral phage peptidomes. PMID:24550280
Potential of known and short prokaryotic protein motifs as a basis for novel peptide-based antibacterial therapeutics: a computational survey. PMID:24478765
EMS mutagenesis in mature seed-derived rice calli as a new method for rapidly obtaining TILLING mutant populations. PMID:24475756
The herpes simplex virus 1 UL51 gene product has cell type-specific functions in cell-to-cell spread. PMID:24453372
Analysis of TTG1 function in Arabis alpina. PMID:24406039
DRD4 rare variants in Attention-Deficit/Hyperactivity Disorder (ADHD): further evidence from a birth cohort study. PMID:24391992
Cyclin A degradation by primate cytomegalovirus protein pUL21a counters its innate restriction of virus replication. PMID:24385906
The cyclin-dependent kinase ortholog pUL97 of human cytomegalovirus interacts with cyclins. PMID:24351800
Signatures of pleiotropy, economy and convergent evolution in a domain-resolved map of human-virus protein-protein interaction networks. PMID:24339775
Enzymatic characterization of a glycoside hydrolase family 5 subfamily 7 (GH5_7) mannanase from Arabidopsis thaliana. PMID:24327260
Status quo of annotation of human disease variants. PMID:24305467
Gene3D: Multi-domain annotations for protein sequence and comparative genome analysis. PMID:24270792
Profiling antibody responses to infections by Chlamydia abortus enables identification of potential virulence factors and candidates for serodiagnosis. PMID:24260366
Overlapping and distinct roles of Aspergillus fumigatus UDP-glucose 4-epimerases in galactose metabolism and the synthesis of galactose-containing cell wall polysaccharides. PMID:24257745
Coxiella burnetii effector protein subverts clathrin-mediated vesicular trafficking for pathogen vacuole biogenesis. PMID:24248335
The eukaryotic linear motif resource ELM: 10 years and counting. PMID:24214962
Comprehensive repertoire of foldable regions within whole genomes. PMID:24204229
Exploring Protein-Peptide Binding Specificity through Computational Peptide Screening. PMID:24204228
IDEAL in 2014 illustrates interaction networks composed of intrinsically disordered proteins and their binding partners. PMID:24178034
Intrinsically disordered regions in autophagy proteins. PMID:24115198
Origins of Myc proteins--using intrinsic protein disorder to trace distant relatives. PMID:24086436
3did: a catalog of domain-based interactions of known three-dimensional structure. PMID:24081580
A disorder-to-order structural transition in the COOH-tail of Fz4 determines misfolding of the L501fsX533-Fz4 mutant. PMID:24036468
Predicting binding within disordered protein regions to structurally characterised peptide-binding domains. PMID:24019881
Overexpressed TPX2 causes ectopic formation of microtubular arrays in the nuclei of acentrosomal plant cells. PMID:24006426
Ubiquitination site preferences in anaphase promoting complex/cyclosome (APC/C) substrates. PMID:24004664
Tumor protein D52 represents a negative regulator of ATM protein levels. PMID:23974097
MYRF is a membrane-associated transcription factor that autoproteolytically cleaves to directly activate myelin genes. PMID:23966833
Effects of optional structural elements, including two alternative amino termini and a new splicing cassette IV, on the function of the sodium-bicarbonate cotransporter NBCn1 (SLC4A7). PMID:23959679
A viral-human interactome based on structural motif-domain interactions captures the human infectome. PMID:23951184
Schnurri-3 regulates ERK downstream of WNT signaling in osteoblasts. PMID:23945236
PepBind: a comprehensive database and computational tool for analysis of protein-peptide interactions. PMID:23896518
SLiMScape: a protein short linear motif analysis plugin for Cytoscape. PMID:23855714
Metabolic interaction between anthocyanin and lignin biosynthesis is associated with peroxidase FaPRX27 in strawberry fruit. PMID:23835409
Intrinsic disorder in PTEN and its interactome confers structural plasticity and functional versatility. PMID:23783762
Functional diversity and structural disorder in the human ubiquitination pathway. PMID:23734257
System-wide analysis reveals intrinsically disordered proteins are prone to ubiquitylation after misfolding stress. PMID:23716602
NRF2-ome: an integrated web resource to discover protein interaction and regulatory networks of NRF2. PMID:23710289
The PsbO homolog from Symbiodinium kawagutii (Dinophyceae) characterized using biochemical and molecular methods. PMID:23708979
Drosophila TRP and TRPL are assembled as homomultimeric channels in vivo. PMID:23687378
Recruitment of EB1, a master regulator of microtubule dynamics, to the surface of the Theileria annulata schizont. PMID:23675298
A novel effect of MARCKS phosphorylation by activated PKC: the dephosphorylation of its serine 25 in chick neuroblasts. PMID:23634231
Marked variability in the extent of protein disorder within and between viral families. PMID:23620725
Construction of human activity-based phosphorylation networks. PMID:23549483
Loss of the E3 ubiquitin ligase LRSAM1 sensitizes peripheral axons to degeneration in a mouse model of Charcot-Marie-Tooth disease. PMID:23519028
Mapping and analysis of phosphorylation sites: a quick guide for cell biologists. PMID:23447708
IGSF9 family proteins. PMID:23417431
Phosphorylation of HopQ1, a type III effector from Pseudomonas syringae, creates a binding site for host 14-3-3 proteins. PMID:23396834
Supervillin-mediated suppression of p53 protein enhances cell survival. PMID:23382381
Identification of a hydrophobic domain in varicella-zoster virus ORF61 necessary for ORF61 self-interaction, viral replication, and skin pathogenesis. PMID:23345513
Systematic analysis of somatic mutations in phosphorylation signaling predicts novel cancer drivers. PMID:23340843
SignaLink 2 - a signaling pathway resource with multi-layered regulatory networks. PMID:23331499
SUMOylation of pancreatic glucokinase regulates its cellular stability and activity. PMID:23297408
Downregulation of Wip1 phosphatase modulates the cellular threshold of DNA damage signaling in mitosis. PMID:23255129
Identification of CRM1-dependent Nuclear Export Cargos Using Quantitative Mass Spectrometry. PMID:23242554
Exploring the binding diversity of intrinsically disordered proteins involved in one-to-many binding. PMID:23233352
Recurrent SETBP1 mutations in atypical chronic myeloid leukemia. PMID:23222956
Disordered binding regions and linear motifs--bridging the gap between two models of molecular recognition. PMID:23056474
Disease-associated mutations disrupt functionally important regions of intrinsic protein disorder. PMID:23055912
Structural and functional characterization of the protein kinase Mps1 in Arabidopsis thaliana. PMID:23049844
Evaluating caveolin interactions: do proteins interact with the caveolin scaffolding domain through a widespread aromatic residue-rich motif? PMID:23028656
Characterization of CCDC28B reveals its role in ciliogenesis and provides insight to understand its modifier effect on Bardet-Biedl syndrome. PMID:23015189
SLiMPrints: conservation-based discovery of functional motif fingerprints in intrinsically disordered protein regions. PMID:22977176
Protein disorder and short conserved motifs in disordered regions are enriched near the cytoplasmic side of single-pass transmembrane proteins. PMID:22962613
Specification, annotation, visualization and simulation of a large rule-based model for ERBB receptor signaling. PMID:22913808
Computational analysis of interactomes: current and future perspectives for bioinformatics approaches to model the host-pathogen interaction space. PMID:22750305
Structure and activity of the only human RNase T2. PMID:22735700
Gain of function in CDKN1C. PMID:22735584
A comparative study of short linear motif compositions of the influenza A virus ribonucleoproteins. PMID:22715401
Sequence determinants of a microtubule tip localization signal (MtLS). PMID:22696216
The NRF2-related interactome and regulome contain multifunctional proteins and fine-tuned autoregulatory loops. PMID:22641035
Linear motifs confer functional diversity onto splice variants. PMID:22638587
iELM--a web server to explore short linear motif-mediated interactions. PMID:22638578
The use of evolutionary patterns in protein annotation. PMID:22633559
Feline immunodeficiency virus Gag is a nuclear shuttling protein. PMID:22623802
Profile-based short linear protein motif discovery. PMID:22607209
PepSite: prediction of peptide-binding sites from protein surfaces. PMID:22600738
Structure of metabotropic glutamate receptor C-terminal domains in contact with interacting proteins. PMID:22536173
GPS-ARM: computational analysis of the APC/C recognition motif by predicting D-boxes and KEN-boxes. PMID:22479614
The identification of short linear motif-mediated interfaces within the human interactome. PMID:22328783 -
ELM 2016--data update and new functionality of the eukaryotic linear motif resource
PubMed citations: 149.
149 articles citing: ELM 2016--data update and new functionality of the eukaryotic linear motif resource
Amplification of cell signaling and disease resistance by an immunity receptor Ve1Ve2 heterocomplex in plants. PMID:35614138
SH3- and actin-binding domains connect ADNP and SHANK3, revealing a fundamental shared mechanism underlying autism. PMID:35538192
STOP Codon Mutations at Sites of Natural Caspase Cleavage Are Implicated in Autism and Alzheimer's Disease: The Case of ADNP. PMID:35399934
Integrating protein copy numbers with interaction networks to quantify stoichiometry in clathrin-mediated endocytosis. PMID:35354856
Function of SYDE C2-RhoGAP family as signaling hubs for neuronal development deduced by computational analysis. PMID:35279680
In silico prediction of HIV-1-host molecular interactions and their directionality. PMID:35134057
MRBLE-pep Measurements Reveal Accurate Binding Affinities for B56, a PP2A Regulatory Subunit. PMID:35128539
Systematic analysis of alterations in the ubiquitin proteolysis system reveals its contribution to driver mutations in cancer. PMID:35121836
Tomato Ve-resistance locus: resilience in the face of adversity? PMID:34811576
Introducing ADNP and SIRT1 as new partners regulating microtubules and histone methylation. PMID:33967268
Protocol for Peptide Synthesis on Spectrally Encoded Beads for MRBLE-pep Assays. PMID:33659339
Phage Display Screening for Alba Superfamily Proteins from the Human Malaria Parasite, Plasmodium falciparum Reveals a High Level of Association with Protein Modification Pathways and Hints at New Drug Targets. PMID:33559027
Chromatin phosphoproteomics unravels a function for AT-hook motif nuclear localized protein AHL13 in PAMP-triggered immunity. PMID:33419940
Putative second hit rare genetic variants in families with seemingly GBA-associated Parkinson's disease. PMID:33402667
Localization and function of a Plasmodium falciparum protein (PF3D7_1459400) during erythrocyte invasion. PMID:33019810
The E3 ubiquitin-protein ligase MDM2 is a novel interactor of the von Hippel-Lindau tumor suppressor. PMID:32985545
RNA-binding and prion domains: the Yin and Yang of phase separation. PMID:32857852
Kinase Interaction Network Expands Functional and Disease Roles of Human Kinases. PMID:32707033
Production of Intrinsically Disordered Proteins for Biophysical Studies: Tips and Tricks. PMID:32696358
Ribosome profiling reveals a functional role for autophagy in mRNA translational control. PMID:32681145
Non-cooperative 4E-BP2 folding with exchange between eIF4E-binding and binding-incompatible states tunes cap-dependent translation inhibition. PMID:32561718
A viral fusogen hijacks the actin cytoskeleton to drive cell-cell fusion. PMID:32441254
The TERB1-TERB2-MAJIN complex of mouse meiotic telomeres dates back to the common ancestor of metazoans. PMID:32408858
Molecular Characterization and Immuno-Reactivity Patterns of a Novel Plasmodium falciparum Armadillo-Type Repeat Protein, PfATRP. PMID:32266165
Precision medicine - networks to the rescue. PMID:32199228
A Novel TBX1 Variant Causing Hypoparathyroidism and Deafness. PMID:32110744
In-Silico Evaluation of a New Gene From Wheat Reveals the Divergent Evolution of the CAP160 Homologous Genes Into Monocots. PMID:31820048
Systematic prediction of FFAT motifs across eukaryote proteomes identifies nucleolar and eisosome proteins with the predicted capacity to form bridges to the endoplasmic reticulum. PMID:31777772
Molecular switch from MYC to MYCN expression in MYC protein negative Burkitt lymphoma cases. PMID:31748534
ELM-the eukaryotic linear motif resource in 2020. PMID:31680160
Optogenetic inhibition of Delta reveals digital Notch signalling output during tissue differentiation. PMID:31668010
Bioinformatics analysis of Ras homologue enriched in the striatum, a potential target for Huntington's disease therapy. PMID:31638189
Pharmacologically diverse antidepressants facilitate TRKB receptor activation by disrupting its interaction with the endocytic adaptor complex AP-2. PMID:31631060
Protein phosphatase 2A regulates the nuclear accumulation of the Arabidopsis bZIP protein VIP1 under hypo-osmotic stress. PMID:31504762
Resources to Discover and Use Short Linear Motifs in Viral Proteins. PMID:31427097
Late-onset retinal degeneration pathology due to mutations in CTRP5 is mediated through HTRA1. PMID:31385385
Quantitative mapping of protein-peptide affinity landscapes using spectrally encoded beads. PMID:31282865
Functional importance of an inverted formin C-terminal tail at morphologically dynamic epithelial junctions. PMID:31215743
TET2 missense variants in human neoplasia. A proposal of structural and functional classification. PMID:31187595
Opposing functions of F-BAR proteins in neuronal membrane protrusion, tubule formation, and neurite outgrowth. PMID:31160379
Gain-of-Function Mutations: An Emerging Advantage for Cancer Biology. PMID:31047772
Computational Prediction of MoRFs, Short Disorder-to-order Transitioning Protein Binding Regions. PMID:31007871
NAP (davunetide) preferential interaction with dynamic 3-repeat Tau explains differential protection in selected tauopathies. PMID:30865715
Computational analysis of the evolutionarily conserved Missing In Metastasis/Metastasis Suppressor 1 gene predicts novel interactions, regulatory regions and transcriptional control. PMID:30858428
Functional Segments on Intrinsically Disordered Regions in Disease-Related Proteins. PMID:30841624
Isoform-specific GSK3A activity is negatively correlated with human sperm motility. PMID:30824926
LARP4A recognizes polyA RNA via a novel binding mechanism mediated by disordered regions and involving the PAM2w motif, revealing interplay between PABP, LARP4A and mRNA. PMID:30820564
Modeling ErbB2-p130Cas interaction to design new potential anticancer agents. PMID:30816273
Analysis of Predicted Host-Parasite Interactomes Reveals Commonalities and Specificities Related to Parasitic Lifestyle and Tissues Tropism. PMID:30815000
Constitutive SRC-mediated phosphorylation of pannexin 1 at tyrosine 198 occurs at the plasma membrane. PMID:30814251
PIRSitePredict for protein functional site prediction using position-specific rules. PMID:30805646
Quantification and discovery of sequence determinants of protein-per-mRNA amount in 29 human tissues. PMID:30777893
Convergent perturbation of the human domain-resolved interactome by viruses and mutations inducing similar disease phenotypes. PMID:30759076
INDETERMINATE-DOMAIN 4 (IDD4) coordinates immune responses with plant-growth in Arabidopsis thaliana. PMID:30677094
Convergent evolution on the hypoxia-inducible factor (HIF) pathway genes EGLN1 and EPAS1 in high-altitude ducks. PMID:30631144
Where differences resemble: sequence-feature analysis in curated databases of intrinsically disordered proteins. PMID:30576490
A resource of variant effect predictions of single nucleotide variants in model organisms. PMID:30573687
The Legionella effector LtpM is a new type of phosphoinositide-activated glucosyltransferase. PMID:30573678
Proteasomal degradation of BRAHMA promotes Boron tolerance in Arabidopsis. PMID:30538237
Oligopeptide Signaling through TbGPR89 Drives Trypanosome Quorum Sensing. PMID:30503212
Nuclear Import of Arabidopsis Poly(ADP-Ribose) Polymerase 2 Is Mediated by Importin-α and a Nuclear Localization Sequence Located Between the Predicted SAP Domains. PMID:30455710
SLiM-Enrich: computational assessment of protein-protein interaction data as a source of domain-motif interactions. PMID:30402352
The Trihelix transcription factor GT2-like 1 (GTL1) promotes salicylic acid metabolism, and regulates bacterial-triggered immunity. PMID:30352065
Analysis of impact metrics for the Protein Data Bank. PMID:30325351
Global pentapeptide statistics are far away from expected distributions. PMID:30310110
Minimotifs dysfunction is pervasive in neurodegenerative disorders. PMID:30225339
Auxin sensing is a property of an unstructured domain in the Auxin Response Factor ETTIN of Arabidopsis thaliana. PMID:30202032
Antagonistic function of the Ve R-genes in tomato. PMID:30121732
Roles of Long Noncoding RNAs and Circular RNAs in Translation. PMID:30082465
Two Strategies of Pseudomonas syringae to Avoid Recognition of the HopQ1 Effector in Nicotiana Species. PMID:30042777
Proteome-wide analysis of human motif-domain interactions mapped on influenza a virus. PMID:29940841
Lck promotes Zap70-dependent LAT phosphorylation by bridging Zap70 to LAT. PMID:29915297
SETBP1 induces transcription of a network of development genes by acting as an epigenetic hub. PMID:29875417
Evidence for interaction between Hsp90 and the ER membrane complex. PMID:29808299
FAM188B enhances cell survival via interaction with USP7. PMID:29795372
Characterization of the caspase family in zebrafish. PMID:29791492
Caspase-mediated cleavage of the centrosomal proteins during apoptosis. PMID:29752437
De novo mutations in MED13, a component of the Mediator complex, are associated with a novel neurodevelopmental disorder. PMID:29740699
Phenotypes in siblings with homozygous mutations of TRAPPC9 and/or MCPH1 support a bifunctional model of MCPH1. PMID:29693325
Whole-exome sequencing uncovers oxidoreductases DHTKD1 and OGDHL as linkers between mitochondrial dysfunction and eosinophilic esophagitis. PMID:29669943
Functional domains of SP110 that modulate its transcriptional regulatory function and cellular translocation. PMID:29642903
Functional domains of the FSHD-associated DUX4 protein. PMID:29618456
Small proline-rich protein 2B drives stress-dependent p53 degradation and fibroblast proliferation in heart failure. PMID:29581288
Kinesin 1 regulates cilia length through an interaction with the Bardet-Biedl syndrome related protein CCDC28B. PMID:29445114
15N detection harnesses the slow relaxation property of nitrogen: Delivering enhanced resolution for intrinsically disordered proteins. PMID:29432148
DIBS: a repository of disordered binding sites mediating interactions with ordered proteins. PMID:29385418
SLALOM, a flexible method for the identification and statistical analysis of overlapping continuous sequence elements in sequence- and time-series data. PMID:29373955
Contrasting Function of Structured N-Terminal and Unstructured C-Terminal Segments of Mycobacterium tuberculosis PPE37 Protein. PMID:29362230
Evolutionary analyses of myosin genes in trypanosomatids show a history of expansion, secondary losses and neofunctionalization. PMID:29358582
High-resolution global peptide-protein docking using fragments-based PIPER-FlexPepDock. PMID:29281622
Functional Analysis of Human Hub Proteins and Their Interactors Involved in the Intrinsic Disorder-Enriched Interactions. PMID:29257115
3DCONS-DB: A Database of Position-Specific Scoring Matrices in Protein Structures. PMID:29244774
Novel linear motif filtering protocol reveals the role of the LC8 dynein light chain in the Hippo pathway. PMID:29240760
Structural analysis of the complex between influenza B nucleoprotein and human importin-α. PMID:29215074
Mediator Complex Subunits MED2, MED5, MED16, and MED23 Genetically Interact in the Regulation of Phenylpropanoid Biosynthesis. PMID:29203634
Quantitative Phosphoproteomic Analysis Reveals Shared and Specific Targets of Arabidopsis Mitogen-Activated Protein Kinases (MAPKs) MPK3, MPK4, and MPK6. PMID:29167316
An update on sORFs.org: a repository of small ORFs identified by ribosome profiling. PMID:29140531
MobiDB 3.0: more annotations for intrinsic disorder, conformational diversity and interactions in proteins. PMID:29136219
The eukaryotic linear motif resource - 2018 update. PMID:29136216
Structural insights into binding of STAC proteins to voltage-gated calcium channels. PMID:29078335
Prediction of protein disorder based on IUPred. PMID:29076577
Proteomic analysis of cell cycle progression in asynchronous cultures, including mitotic subphases, using PRIMMUS. PMID:29052541
Biallelic mutations in the ferredoxin reductase gene cause novel mitochondriopathy with optic atrophy. PMID:29040572
ASXL gain-of-function truncation mutants: defective and dysregulated forms of a natural ribosomal frameshifting product? PMID:29037253
MFIB: a repository of protein complexes with mutual folding induced by binding. PMID:29036655
PixelDB: Protein-peptide complexes annotated with structural conservation of the peptide binding mode. PMID:29024246
The Membrane Glycoprotein M6a Endocytic/Recycling Pathway Involves Clathrin-Mediated Endocytosis and Affects Neuronal Synapses. PMID:28979185
A growth hormone receptor SNP promotes lung cancer by impairment of SOCS2-mediated degradation. PMID:28967904
3DBIONOTES v2.0: a web server for the automatic annotation of macromolecular structures. PMID:28961691
Inverted formins: A subfamily of atypical formins. PMID:28921928
Rotavirus NSP1 Requires Casein Kinase II-Mediated Phosphorylation for Hijacking of Cullin-RING Ligases. PMID:28851847
Proteins Recognizing DNA: Structural Uniqueness and Versatility of DNA-Binding Domains in Stem Cell Transcription Factors. PMID:28763006
Protein-protein binding selectivity and network topology constrain global and local properties of interface binding networks. PMID:28717235
An Arabidopsis kinase cascade influences auxin-responsive cell expansion. PMID:28710770
Wbp2nl has a developmental role in establishing neural and non-neural ectodermal fates. PMID:28663133
Resurrecting the Dead (Molecules). PMID:28652896
Hypoxia Inducible Factor (HIF) transcription factor family expansion, diversification, divergence and selection in eukaryotes. PMID:28614393
A loss of Pdxk model of Parkinson disease in Drosophila can be suppressed by Buffy. PMID:28606139
Functions of intrinsic disorder in transmembrane proteins. PMID:28601983
Comprehensive review of methods for prediction of intrinsic disorder and its molecular functions. PMID:28589442
Cyclin-Dependent Kinase-Dependent Phosphorylation of Sox2 at Serine 39 Regulates Neurogenesis. PMID:28584195
ChiPPI: a novel method for mapping chimeric protein-protein interactions uncovers selection principles of protein fusion events in cancer. PMID:28549153
Exhaustive search of linear information encoding protein-peptide recognition. PMID:28426660
Insights into the Structure, Function, and Ion-Mediated Signaling Pathways Transduced by Plant Integrin-Linked Kinases. PMID:28421082
Evolutionary Analysis of the Mammalian Tuftelin Sequence Reveals Features of Functional Importance. PMID:28409196
GibbsCluster: unsupervised clustering and alignment of peptide sequences. PMID:28407089
Modeling disordered protein interactions from biophysical principles. PMID:28394890
SLiMSearch: a framework for proteome-wide discovery and annotation of functional modules in intrinsically disordered regions. PMID:28387819
Bax-inhibitor-1 knockdown phenotypes are suppressed by Buffy and exacerbate degeneration in a Drosophila model of Parkinson disease. PMID:28243526
The 24th annual Nucleic Acids Research database issue: a look back and upcoming changes. PMID:28053160
FlexPepDock lessons from CAPRI peptide-protein rounds and suggested new criteria for assessment of model quality and utility. PMID:28002624
The contribution of intrinsically disordered regions to protein function, cellular complexity, and human disease. PMID:27911701
DisProt 7.0: a major update of the database of disordered proteins. PMID:27899601
Structures and Short Linear Motif of Disordered Transcription Factor Regions Provide Clues to the Interactome of the Cellular Hub Protein Radical-induced Cell Death1. PMID:27881680
Loss of porin function in dopaminergic neurons of Drosophila is suppressed by Buffy. PMID:27881168
Conserved Ankyrin Repeat Proteins and Their NIMA Kinase Partners Regulate Extracellular Matrix Remodeling and Intracellular Trafficking in Caenorhabditis elegans. PMID:27799278
New insights from an old mutant: SPADIX4 governs fruiting body development but not hyphal fusion in Sordaria macrospora. PMID:27770259
CPR5 modulates salicylic acid and the unfolded protein response to manage tradeoffs between plant growth and stress responses. PMID:27747970
A widely employed germ cell marker is an ancient disordered protein with reproductive functions in diverse eukaryotes. PMID:27718356
Revisiting the Phylogeny of the Animal Formins: Two New Subtypes, Relationships with Multiple Wing Hairs Proteins, and a Lost Human Formin. PMID:27695129
Bcl-2 homologue Debcl enhances α-synuclein-induced phenotypes in Drosophila. PMID:27672511
DAO1 catalyzes temporal and tissue-specific oxidative inactivation of auxin in Arabidopsis thaliana. PMID:27651492
Loss of function of the Drosophila Ninein-related centrosomal protein Bsg25D causes mitotic defects and impairs embryonic development. PMID:27422905
Comparative proteomic study of Arabidopsis mutants mpk4 and mpk6. PMID:27324189
A Concentration-Dependent Liquid Phase Separation Can Cause Toxicity upon Increased Protein Expression. PMID:27320918
Analysis of coevolution in nonstructural proteins of chikungunya virus. PMID:27251040
ProViz-a web-based visualization tool to investigate the functional and evolutionary features of protein sequences. PMID:27085803
Functional correlations of respiratory syncytial virus proteins to intrinsic disorder. PMID:27062995
The 2016 database issue of Nucleic Acids Research and an updated molecular biology database collection. PMID:26740669 - http://dx.doi.org/10.1093/nar/gkx1077
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More detailed information about this field from each metasource.
computational predictions
metasource: Fairsharing.org
version: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
gene ontology enrichment
metasource: Fairsharing.org
version: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
protein
metasource: Fairsharing.org
version: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
protein domain
metasource: Fairsharing.org
version: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
protein interaction
metasource: Fairsharing.org
version: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
sequence motif
metasource: Fairsharing.org
version: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
structure databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
protein structure
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Tags
More detailed information about this field from each metasource.
computational predictions
metasource: Fairsharing.orgversion: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
gene ontology enrichment
metasource: Fairsharing.orgversion: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
protein
metasource: Fairsharing.orgversion: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
protein domain
metasource: Fairsharing.orgversion: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
protein interaction
metasource: Fairsharing.orgversion: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
sequence motif
metasource: Fairsharing.orgversion: FAIRsharing.org: ELM; Eukaryotic Linear Motifs; DOI: https://doi.org/10.25504/FAIRsharing.rj3kj5; Last edited: April 16, 2021, 3:54 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
structure databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
protein structure
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
computational predictions gene ontology enrichment protein protein domain protein interaction sequence motif structure protein structure
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